RNA–Protein interactions for RNA: ENST00000585672.5

MBD1-212, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-212ENST00000585672 CNGB1Q14028 1251 aaPredicted RBP19.6■□□□□ 0.73
MBD1-212ENST00000585672 POGKQ9P215 609 aa19.59■□□□□ 0.73
MBD1-212ENST00000585672 PTPRKQ15262 1439 aa19.58■□□□□ 0.72
MBD1-212ENST00000585672 PNISRQ8TF01 805 aaKnown RBP19.57■□□□□ 0.72
MBD1-212ENST00000585672 PTPN23Q9H3S7 1636 aa19.57■□□□□ 0.72
MBD1-212ENST00000585672 PNNQ9H307 717 aaKnown RBP19.57■□□□□ 0.72
MBD1-212ENST00000585672 RCAN3Q9UKA8 241 aa19.57■□□□□ 0.72
MBD1-212ENST00000585672 DHX29Q7Z478 1369 aaKnown RBP19.55■□□□□ 0.72
MBD1-212ENST00000585672 KIF27Q86VH2 1401 aa19.55■□□□□ 0.72
MBD1-212ENST00000585672 CFAP43Q8NDM7 1665 aa19.55■□□□□ 0.72
MBD1-212ENST00000585672 ABCA5Q8WWZ7 1642 aa19.55■□□□□ 0.72
MBD1-212ENST00000585672 NAIPQ13075 1403 aa19.53■□□□□ 0.72
MBD1-212ENST00000585672 CLCN1P35523 988 aa19.52■□□□□ 0.72
MBD1-212ENST00000585672 L3MBTL2Q969R5 705 aa19.52■□□□□ 0.72
MBD1-212ENST00000585672 L1TD1Q5T7N2 865 aaKnown RBP19.51■□□□□ 0.71
MBD1-212ENST00000585672 FGD6Q6ZV73 1430 aa19.49■□□□□ 0.71
MBD1-212ENST00000585672 SPATA31E1Q6ZUB1 1445 aa19.49■□□□□ 0.71
MBD1-212ENST00000585672 ATP1B4Q9UN42 357 aaPredicted RBP19.49■□□□□ 0.71
MBD1-212ENST00000585672 DENND4BO75064 1496 aaPredicted RBP19.47■□□□□ 0.71
MBD1-212ENST00000585672 C8orf34Q49A92 452 aa19.47■□□□□ 0.71
MBD1-212ENST00000585672 FMN1Q68DA7 1419 aa19.47■□□□□ 0.71
MBD1-212ENST00000585672 NBPF8Q3BBV2 869 aa19.47■□□□□ 0.71
MBD1-212ENST00000585672 PCF11O94913 1555 aaKnown RBP19.46■□□□□ 0.71
MBD1-212ENST00000585672 TMC1Q8TDI8 760 aa19.46■□□□□ 0.71
MBD1-212ENST00000585672 PLIN1O60240 522 aa19.45■□□□□ 0.7
MBD1-212ENST00000585672 FAM161AQ3B820 660 aa19.45■□□□□ 0.7
MBD1-212ENST00000585672 LRPPRCP42704 1394 aaKnown RBP19.43■□□□□ 0.7
MBD1-212ENST00000585672 XRCC6P12956 609 aaKnown RBP eCLIP19.43■□□□□ 0.72e-6■■■■■ 29.9
MBD1-212ENST00000585672 CRBNQ96SW2 442 aa19.43■□□□□ 0.7
MBD1-212ENST00000585672 POLR1AO95602 1720 aaPredicted RBP19.43■□□□□ 0.7
MBD1-212ENST00000585672 RBM10P98175 930 aaKnown RBP19.42■□□□□ 0.7
MBD1-212ENST00000585672 KDM2BQ8NHM5 1336 aa19.4■□□□□ 0.7
MBD1-212ENST00000585672 A0A0U1RQG5 324 aaPredicted RBP19.4■□□□□ 0.7
MBD1-212ENST00000585672 P3H3Q8IVL6 736 aa19.4■□□□□ 0.7
MBD1-212ENST00000585672 ARXQ96QS3 562 aa19.4■□□□□ 0.7
MBD1-212ENST00000585672 PANK2Q9BZ23 570 aa19.38■□□□□ 0.69
MBD1-212ENST00000585672 KTN1Q86UP2 1357 aaKnown RBP19.37■□□□□ 0.69
MBD1-212ENST00000585672 CUX1P39880 1505 aa19.37■□□□□ 0.69
MBD1-212ENST00000585672 POLR3GLQ9BT43 218 aa19.36■□□□□ 0.69
MBD1-212ENST00000585672 PRDM4Q9UKN5 801 aa19.36■□□□□ 0.69
MBD1-212ENST00000585672 FSD2A1L4K1 749 aa19.35■□□□□ 0.69
MBD1-212ENST00000585672 CDCA7LQ96GN5 454 aa19.34■□□□□ 0.69
MBD1-212ENST00000585672 GOLGA6L3A6NEY3 463 aa19.34■□□□□ 0.69
MBD1-212ENST00000585672 AAMPQ13685 434 aa19.34■□□□□ 0.69
MBD1-212ENST00000585672 PDE3BQ13370 1112 aa19.33■□□□□ 0.69
MBD1-212ENST00000585672 CENPJQ9HC77 1338 aaPredicted RBP19.33■□□□□ 0.69
MBD1-212ENST00000585672 MYOM3Q5VTT5 1437 aa19.33■□□□□ 0.69
MBD1-212ENST00000585672 FOXD1Q16676 465 aa19.33■□□□□ 0.68
MBD1-212ENST00000585672 PDCL3Q9H2J4 239 aa19.33■□□□□ 0.68
MBD1-212ENST00000585672 CALD1Q05682 793 aaKnown RBP19.32■□□□□ 0.68
MBD1-212ENST00000585672 RRP7BPQ9NSQ0 103 aa19.32■□□□□ 0.68
MBD1-212ENST00000585672 HECW1Q76N89 1606 aa19.31■□□□□ 0.68
MBD1-212ENST00000585672 CENPQQ7L2Z9 268 aaPredicted RBP19.31■□□□□ 0.68
MBD1-212ENST00000585672 IGF1RP08069 1367 aa19.31■□□□□ 0.68
MBD1-212ENST00000585672 ARID4BQ4LE39 1312 aaPredicted RBP19.31■□□□□ 0.68
MBD1-212ENST00000585672 C20orf194Q5TEA3 1177 aa19.31■□□□□ 0.68
MBD1-212ENST00000585672 MPHOSPH9Q99550 1183 aa19.31■□□□□ 0.68
MBD1-212ENST00000585672 FYCO1Q9BQS8 1478 aa19.31■□□□□ 0.68
MBD1-212ENST00000585672 SLKQ9H2G2 1235 aaPredicted RBP19.29■□□□□ 0.68
MBD1-212ENST00000585672 ATAD2BQ9ULI0 1458 aa19.29■□□□□ 0.68
MBD1-212ENST00000585672 MIA2Q96PC5 1412 aa19.29■□□□□ 0.68
MBD1-212ENST00000585672 BRD4O60885 1362 aaPredicted RBP19.28■□□□□ 0.68
MBD1-212ENST00000585672 USP19O94966 1318 aa19.28■□□□□ 0.68
MBD1-212ENST00000585672 TEX14Q8IWB6 1497 aa19.28■□□□□ 0.68
MBD1-212ENST00000585672 ERBB4Q15303 1308 aa19.27■□□□□ 0.68
MBD1-212ENST00000585672 FHOD3Q2V2M9 1422 aa19.27■□□□□ 0.68
MBD1-212ENST00000585672 CASKIN1Q8WXD9 1431 aa19.27■□□□□ 0.68
MBD1-212ENST00000585672 BCORL1Q5H9F3 1711 aa19.27■□□□□ 0.67
MBD1-212ENST00000585672 ESPNB1AK53 854 aa19.26■□□□□ 0.67
MBD1-212ENST00000585672 RGS3P49796 1198 aa19.26■□□□□ 0.67
MBD1-212ENST00000585672 FGD1P98174 961 aa19.26■□□□□ 0.67
MBD1-212ENST00000585672 TPM2P07951 284 aa19.25■□□□□ 0.67
MBD1-212ENST00000585672 ANTXR1Q9H6X2 564 aa19.25■□□□□ 0.67
MBD1-212ENST00000585672 CHIC2Q9UKJ5 165 aa19.24■□□□□ 0.67
MBD1-212ENST00000585672 MYBBP1AQ9BQG0 1328 aaKnown RBP19.24■□□□□ 0.67
MBD1-212ENST00000585672 RPRD2Q5VT52 1461 aaKnown RBP19.24■□□□□ 0.67
MBD1-212ENST00000585672 GZF1Q9H116 711 aaPredicted RBP19.23■□□□□ 0.67
MBD1-212ENST00000585672 KDM6BO15054 1643 aa19.23■□□□□ 0.67
MBD1-212ENST00000585672 CARMIL1Q5VZK9 1371 aa19.23■□□□□ 0.67
MBD1-212ENST00000585672 KIF15Q9NS87 1388 aa19.21■□□□□ 0.67
MBD1-212ENST00000585672 MTUS2Q5JR59 1369 aa19.21■□□□□ 0.67
MBD1-212ENST00000585672 ANKRD30BQ9BXX2 1392 aa19.21■□□□□ 0.67
MBD1-212ENST00000585672 BECN1Q14457 450 aa19.2■□□□□ 0.66
MBD1-212ENST00000585672 USP47Q96K76 1375 aa19.2■□□□□ 0.66
MBD1-212ENST00000585672 FGD5Q6ZNL6 1462 aa19.2■□□□□ 0.66
MBD1-212ENST00000585672 MRE11P49959 708 aa19.19■□□□□ 0.66
MBD1-212ENST00000585672 RALBP1Q15311 655 aa19.18■□□□□ 0.66
MBD1-212ENST00000585672 SEC24BO95487 1268 aa19.17■□□□□ 0.66
MBD1-212ENST00000585672 MYH16Q9H6N6 1097 aa19.17■□□□□ 0.66
MBD1-212ENST00000585672 GCC2Q8IWJ2 1684 aa19.16■□□□□ 0.66
MBD1-212ENST00000585672 CC2D2AQ9P2K1 1620 aa19.16■□□□□ 0.66
MBD1-212ENST00000585672 ROCK2O75116 1388 aaKnown RBP19.15■□□□□ 0.66
MBD1-212ENST00000585672 MCM4P33991 863 aa19.14■□□□□ 0.65
MBD1-212ENST00000585672 GRPEL1Q9HAV7 217 aa19.13■□□□□ 0.65
MBD1-212ENST00000585672 DNAJC5BQ9UF47 199 aa19.13■□□□□ 0.65
MBD1-212ENST00000585672 KIAA1211Q6ZU35 1233 aa19.13■□□□□ 0.65
MBD1-212ENST00000585672 TRAK2O60296 914 aa19.1■□□□□ 0.65
MBD1-212ENST00000585672 NLRP13Q86W25 1043 aa19.1■□□□□ 0.65
MBD1-212ENST00000585672 NLRP1Q9C000 1473 aa19.09■□□□□ 0.65
MBD1-212ENST00000585672 RIPK4P57078 832 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms