RNA–Protein interactions for RNA: ENST00000585652.5

AP3D1-203, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 2

Gene AP3D1, Length 4,433 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-203ENST00000585652 ARID4BQ4LE39 1312 aaPredicted RBP17.23■□□□□ 0.35
AP3D1-203ENST00000585652 KIF3BO15066 747 aa17.22■□□□□ 0.35
AP3D1-203ENST00000585652 PLEKHG5O94827 1062 aa17.22■□□□□ 0.35
AP3D1-203ENST00000585652 POLA1P09884 1462 aaPredicted RBP17.22■□□□□ 0.35
AP3D1-203ENST00000585652 MYOM3Q5VTT5 1437 aa17.22■□□□□ 0.35
AP3D1-203ENST00000585652 KANK1Q14678 1352 aa17.21■□□□□ 0.35
AP3D1-203ENST00000585652 PTPRGP23470 1445 aa17.21■□□□□ 0.35
AP3D1-203ENST00000585652 CASKIN1Q8WXD9 1431 aa17.21■□□□□ 0.35
AP3D1-203ENST00000585652 TOPBP1Q92547 1522 aa17.21■□□□□ 0.34
AP3D1-203ENST00000585652 RRBP1Q9P2E9 1410 aaKnown RBP17.2■□□□□ 0.34
AP3D1-203ENST00000585652 MLECQ14165 292 aa17.2■□□□□ 0.34
AP3D1-203ENST00000585652 POGKQ9P215 609 aa17.19■□□□□ 0.34
AP3D1-203ENST00000585652 ST20-MTHFSA0A0A6YYL1 179 aa17.19■□□□□ 0.34
AP3D1-203ENST00000585652 EIF5BO60841 1220 aaKnown RBP17.19■□□□□ 0.34
AP3D1-203ENST00000585652 CFAP53Q96M91 514 aa17.19■□□□□ 0.34
AP3D1-203ENST00000585652 NCOA2Q15596 1464 aa17.17■□□□□ 0.34
AP3D1-203ENST00000585652 UPF2Q9HAU5 1272 aaKnown RBP17.17■□□□□ 0.34
AP3D1-203ENST00000585652 SPAG9O60271 1321 aaKnown RBP17.16■□□□□ 0.34
AP3D1-203ENST00000585652 RSPH4AQ5TD94 716 aa17.16■□□□□ 0.34
AP3D1-203ENST00000585652 STK26Q9P289 416 aa17.14■□□□□ 0.33
AP3D1-203ENST00000585652 UNC13AQ9UPW8 1703 aa17.12■□□□□ 0.33
AP3D1-203ENST00000585652 UACAQ9BZF9 1416 aa17.12■□□□□ 0.33
AP3D1-203ENST00000585652 KTN1Q86UP2 1357 aaKnown RBP17.12■□□□□ 0.33
AP3D1-203ENST00000585652 FRAT1Q92837 279 aaPredicted RBP17.12■□□□□ 0.33
AP3D1-203ENST00000585652 PRKRIP1Q9H875 184 aaPredicted RBP17.12■□□□□ 0.33
AP3D1-203ENST00000585652 U2SURPO15042 1029 aaKnown RBP17.11■□□□□ 0.33
AP3D1-203ENST00000585652 C14orf37Q86TY3 774 aa17.11■□□□□ 0.33
AP3D1-203ENST00000585652 HSP90AA1P07900 732 aaKnown RBP17.1■□□□□ 0.33
AP3D1-203ENST00000585652 FYCO1Q9BQS8 1478 aa17.1■□□□□ 0.33
AP3D1-203ENST00000585652 SRPK2P78362 688 aaKnown RBP17.1■□□□□ 0.33
AP3D1-203ENST00000585652 NUTM2DQ5VT03 806 aaPredicted RBP17.1■□□□□ 0.33
AP3D1-203ENST00000585652 GRIN2BQ13224 1484 aa17.09■□□□□ 0.33
AP3D1-203ENST00000585652 ZBTB7CA1YPR0 619 aa17.08■□□□□ 0.33
AP3D1-203ENST00000585652 RGS3P49796 1198 aa17.08■□□□□ 0.33
AP3D1-203ENST00000585652 PEG3Q9GZU2 1588 aa17.08■□□□□ 0.32
AP3D1-203ENST00000585652 RALBP1Q15311 655 aa17.07■□□□□ 0.32
AP3D1-203ENST00000585652 LAS1LQ9Y4W2 734 aaKnown RBP17.07■□□□□ 0.32
AP3D1-203ENST00000585652 MORC1Q86VD1 984 aa17.07■□□□□ 0.32
AP3D1-203ENST00000585652 RBM19Q9Y4C8 960 aaKnown RBP17.07■□□□□ 0.32
AP3D1-203ENST00000585652 CCDC144AA2RUR9 1427 aa17.06■□□□□ 0.32
AP3D1-203ENST00000585652 USP47Q96K76 1375 aa17.06■□□□□ 0.32
AP3D1-203ENST00000585652 NUDCQ9Y266 331 aa17.05■□□□□ 0.32
AP3D1-203ENST00000585652 MAPK8IP3Q9UPT6 1336 aa17.05■□□□□ 0.32
AP3D1-203ENST00000585652 PRDM2Q13029 1718 aa17.04■□□□□ 0.32
AP3D1-203ENST00000585652 TIAM1Q13009 1591 aa17.04■□□□□ 0.32
AP3D1-203ENST00000585652 TSHZ2Q9NRE2 1034 aa17.03■□□□□ 0.32
AP3D1-203ENST00000585652 NLRP13Q86W25 1043 aa17.02■□□□□ 0.32
AP3D1-203ENST00000585652 FTSJ3Q8IY81 847 aaKnown RBP17.02■□□□□ 0.32
AP3D1-203ENST00000585652 DNMBPQ6XZF7 1577 aa17.02■□□□□ 0.31
AP3D1-203ENST00000585652 RCAN3Q9UKA8 241 aa17.02■□□□□ 0.31
AP3D1-203ENST00000585652 KIF15Q9NS87 1388 aa17.01■□□□□ 0.31
AP3D1-203ENST00000585652 PANK3Q9H999 370 aa17.01■□□□□ 0.31
AP3D1-203ENST00000585652 WASHC2CQ9Y4E1 1318 aa17■□□□□ 0.31
AP3D1-203ENST00000585652 WASHC2AQ641Q2 1341 aa17■□□□□ 0.31
AP3D1-203ENST00000585652 SOX12O15370 315 aa17■□□□□ 0.31
AP3D1-203ENST00000585652 ANKRD50Q9ULJ7 1429 aa16.99■□□□□ 0.31
AP3D1-203ENST00000585652 EFCAB5A4FU69 1503 aa16.99■□□□□ 0.31
AP3D1-203ENST00000585652 TRAK1Q9UPV9 953 aa16.99■□□□□ 0.31
AP3D1-203ENST00000585652 ABCA10Q8WWZ4 1543 aa16.99■□□□□ 0.31
AP3D1-203ENST00000585652 KIF7Q2M1P5 1343 aa16.99■□□□□ 0.31
AP3D1-203ENST00000585652 ARXQ96QS3 562 aa16.99■□□□□ 0.31
AP3D1-203ENST00000585652 PRG4Q92954 1404 aaPredicted RBP16.98■□□□□ 0.31
AP3D1-203ENST00000585652 MRC2Q9UBG0 1479 aa16.98■□□□□ 0.31
AP3D1-203ENST00000585652 MYH16Q9H6N6 1097 aa16.97■□□□□ 0.31
AP3D1-203ENST00000585652 CCDC146Q8IYE0 955 aa16.96■□□□□ 0.31
AP3D1-203ENST00000585652 CCDC7Q96M83 1385 aa16.95■□□□□ 0.3
AP3D1-203ENST00000585652 NBPF8Q3BBV2 869 aa16.95■□□□□ 0.3
AP3D1-203ENST00000585652 U2AF1L5P0DN76 240 aaPredicted RBP16.94■□□□□ 0.3
AP3D1-203ENST00000585652 U2AF1Q01081 240 aaKnown RBP eCLIP16.94■□□□□ 0.3
AP3D1-203ENST00000585652 AFAP1Q8N556 730 aa16.94■□□□□ 0.3
AP3D1-203ENST00000585652 HFM1A2PYH4 1435 aa16.94■□□□□ 0.3
AP3D1-203ENST00000585652 MYBBP1AQ9BQG0 1328 aaKnown RBP16.92■□□□□ 0.3
AP3D1-203ENST00000585652 SNAPC4Q5SXM2 1469 aa16.92■□□□□ 0.3
AP3D1-203ENST00000585652 CYB5RLQ6IPT4 315 aa16.91■□□□□ 0.3
AP3D1-203ENST00000585652 IFT140Q96RY7 1462 aa16.91■□□□□ 0.3
AP3D1-203ENST00000585652 ERICH6BQ5W0A0 696 aa16.91■□□□□ 0.3
AP3D1-203ENST00000585652 LMOD2Q6P5Q4 547 aa16.9■□□□□ 0.3
AP3D1-203ENST00000585652 CDK13Q14004 1512 aaKnown RBP16.9■□□□□ 0.3
AP3D1-203ENST00000585652 PCF11O94913 1555 aaKnown RBP16.9■□□□□ 0.3
AP3D1-203ENST00000585652 DDRGK1Q96HY6 314 aa16.89■□□□□ 0.29
AP3D1-203ENST00000585652 TRHP20396 242 aaPredicted RBP16.89■□□□□ 0.29
AP3D1-203ENST00000585652 NAIPQ13075 1403 aa16.88■□□□□ 0.29
AP3D1-203ENST00000585652 NOP58Q9Y2X3 529 aaKnown RBP16.88■□□□□ 0.29
AP3D1-203ENST00000585652 EIF3AQ14152 1382 aaKnown RBP16.88■□□□□ 0.29
AP3D1-203ENST00000585652 WDR97A6NE52 1622 aa16.88■□□□□ 0.29
AP3D1-203ENST00000585652 EHBP1L1Q8N3D4 1523 aa16.88■□□□□ 0.29
AP3D1-203ENST00000585652 ZBED9Q6R2W3 1325 aa16.87■□□□□ 0.29
AP3D1-203ENST00000585652 OSCARQ8IYS5 282 aa16.87■□□□□ 0.29
AP3D1-203ENST00000585652 GOLGA2Q08379 1002 aa16.86■□□□□ 0.29
AP3D1-203ENST00000585652 URB2Q14146 1524 aaKnown RBP16.86■□□□□ 0.29
AP3D1-203ENST00000585652 MIA2Q96PC5 1412 aa16.86■□□□□ 0.29
AP3D1-203ENST00000585652 BIVM-ERCC5R4GMW8 1640 aa16.86■□□□□ 0.29
AP3D1-203ENST00000585652 HDGFL2Q7Z4V5 671 aaPredicted RBP16.86■□□□□ 0.29
AP3D1-203ENST00000585652 TROQ12816 1431 aaPredicted RBP16.86■□□□□ 0.29
AP3D1-203ENST00000585652 EPRSP07814 1512 aaKnown RBP16.85■□□□□ 0.29
AP3D1-203ENST00000585652 PLIN1O60240 522 aa16.85■□□□□ 0.29
AP3D1-203ENST00000585652 NBPF1Q3BBV0 1214 aa16.84■□□□□ 0.29
AP3D1-203ENST00000585652 BECN1Q14457 450 aa16.84■□□□□ 0.29
AP3D1-203ENST00000585652 RRP7AQ9Y3A4 280 aaKnown RBP16.84■□□□□ 0.29
AP3D1-203ENST00000585652 HDGFP51858 240 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms