RNA–Protein interactions for RNA: ENST00000585161.1

CDK12-210, Transcript of cyclin dependent kinase 12, humanhuman

Gene CDK12, Length 2,036 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-210ENST00000585161 USP35Q9P2H5 1018 aa18.03■□□□□ 0.48
CDK12-210ENST00000585161 BCL11BQ9C0K0 894 aaPredicted RBP18.02■□□□□ 0.48
CDK12-210ENST00000585161 P3H3Q8IVL6 736 aa18.01■□□□□ 0.47
CDK12-210ENST00000585161 ARHGAP35Q9NRY4 1499 aa18.01■□□□□ 0.47
CDK12-210ENST00000585161 PLPPR3Q6T4P5 718 aa18.01■□□□□ 0.47
CDK12-210ENST00000585161 FHOD3Q2V2M9 1422 aa18■□□□□ 0.47
CDK12-210ENST00000585161 UACAQ9BZF9 1416 aa18■□□□□ 0.47
CDK12-210ENST00000585161 UHRF1BP1LA0JNW5 1464 aa18■□□□□ 0.47
CDK12-210ENST00000585161 ABCC2Q92887 1545 aa17.99■□□□□ 0.47
CDK12-210ENST00000585161 TIMELESSQ9UNS1 1208 aa17.99■□□□□ 0.47
CDK12-210ENST00000585161 PLB1Q6P1J6 1458 aa17.99■□□□□ 0.47
CDK12-210ENST00000585161 ABCA8O94911 1581 aa17.99■□□□□ 0.47
CDK12-210ENST00000585161 RRP9O43818 475 aaKnown RBP17.95■□□□□ 0.46
CDK12-210ENST00000585161 ITGAEP38570 1179 aa17.95■□□□□ 0.46
CDK12-210ENST00000585161 FAM43AQ8N2R8 423 aa17.93■□□□□ 0.46
CDK12-210ENST00000585161 CLIP1P30622 1438 aa17.93■□□□□ 0.46
CDK12-210ENST00000585161 KDM5BQ9UGL1 1544 aa17.92■□□□□ 0.46
CDK12-210ENST00000585161 MAPKBP1O60336 1514 aa17.91■□□□□ 0.46
CDK12-210ENST00000585161 RAPGEF6Q8TEU7 1601 aa17.9■□□□□ 0.46
CDK12-210ENST00000585161 CEP162Q5TB80 1403 aa17.9■□□□□ 0.46
CDK12-210ENST00000585161 PAK3O75914 559 aaPredicted RBP17.88■□□□□ 0.45
CDK12-210ENST00000585161 FMN1Q68DA7 1419 aa17.88■□□□□ 0.45
CDK12-210ENST00000585161 ZCCHC11Q5TAX3 1644 aaKnown RBP17.87■□□□□ 0.45
CDK12-210ENST00000585161 NPM1P06748 294 aaKnown RBP eCLIP17.86■□□□□ 0.45
CDK12-210ENST00000585161 NUP153P49790 1475 aaKnown RBP17.86■□□□□ 0.45
CDK12-210ENST00000585161 ZNF326Q5BKZ1 582 aaKnown RBP17.84■□□□□ 0.45
CDK12-210ENST00000585161 ATP10BO94823 1461 aa17.82■□□□□ 0.44
CDK12-210ENST00000585161 ASXL2Q76L83 1435 aa17.82■□□□□ 0.44
CDK12-210ENST00000585161 HSP90AA2PQ14568 343 aaPredicted RBP17.82■□□□□ 0.44
CDK12-210ENST00000585161 IPO9Q96P70 1041 aaKnown RBP17.81■□□□□ 0.44
CDK12-210ENST00000585161 BRPF3Q9ULD4 1205 aa17.79■□□□□ 0.44
CDK12-210ENST00000585161 ABCC10Q5T3U5 1492 aa17.79■□□□□ 0.44
CDK12-210ENST00000585161 PCF11O94913 1555 aaKnown RBP17.78■□□□□ 0.44
CDK12-210ENST00000585161 HECW1Q76N89 1606 aa17.78■□□□□ 0.44
CDK12-210ENST00000585161 DIP2BQ9P265 1576 aa17.78■□□□□ 0.44
CDK12-210ENST00000585161 ARID3CA6NKF2 412 aa17.77■□□□□ 0.43
CDK12-210ENST00000585161 RSPH4AQ5TD94 716 aa17.77■□□□□ 0.43
CDK12-210ENST00000585161 CASKIN1Q8WXD9 1431 aa17.77■□□□□ 0.43
CDK12-210ENST00000585161 KIF13AQ9H1H9 1805 aa17.76■□□□□ 0.43
CDK12-210ENST00000585161 NEFMP07197 916 aa17.76■□□□□ 0.43
CDK12-210ENST00000585161 WDR7Q9Y4E6 1490 aa17.76■□□□□ 0.43
CDK12-210ENST00000585161 ZBTB47Q9UFB7 747 aaPredicted RBP17.74■□□□□ 0.43
CDK12-210ENST00000585161 FYCO1Q9BQS8 1478 aa17.74■□□□□ 0.43
CDK12-210ENST00000585161 EPRSP07814 1512 aaKnown RBP17.74■□□□□ 0.43
CDK12-210ENST00000585161 CDK13Q14004 1512 aaKnown RBP17.74■□□□□ 0.43
CDK12-210ENST00000585161 ANP32AP39687 249 aaKnown RBP17.74■□□□□ 0.43
CDK12-210ENST00000585161 LRRIQ1Q96JM4 1722 aa17.73■□□□□ 0.43
CDK12-210ENST00000585161 CENPJQ9HC77 1338 aaPredicted RBP17.72■□□□□ 0.43
CDK12-210ENST00000585161 CALD1Q05682 793 aaKnown RBP17.71■□□□□ 0.42
CDK12-210ENST00000585161 GLI2P10070 1586 aa17.7■□□□□ 0.42
CDK12-210ENST00000585161 FAM69CQ0P6D2 419 aa17.69■□□□□ 0.42
CDK12-210ENST00000585161 VPS8Q8N3P4 1428 aa17.67■□□□□ 0.42
CDK12-210ENST00000585161 CCDC18Q5T9S5 1454 aa17.67■□□□□ 0.42
CDK12-210ENST00000585161 GSE1Q14687 1217 aa17.67■□□□□ 0.42
CDK12-210ENST00000585161 ATP1B4Q9UN42 357 aaPredicted RBP17.67■□□□□ 0.42
CDK12-210ENST00000585161 PPM1GO15355 546 aaPredicted RBP17.66■□□□□ 0.42
CDK12-210ENST00000585161 HNRNPUL2Q1KMD3 747 aaKnown RBP17.65■□□□□ 0.42
CDK12-210ENST00000585161 PPP4R2Q9NY27 417 aa17.65■□□□□ 0.42
CDK12-210ENST00000585161 HSP90AA1P07900 732 aaKnown RBP17.65■□□□□ 0.42
CDK12-210ENST00000585161 MAP3K4Q9Y6R4 1608 aa17.64■□□□□ 0.41
CDK12-210ENST00000585161 PRDM4Q9UKN5 801 aa17.64■□□□□ 0.41
CDK12-210ENST00000585161 PLEKHD1A6NEE1 506 aa17.62■□□□□ 0.41
CDK12-210ENST00000585161 BRD2P25440 801 aaKnown RBP17.62■□□□□ 0.41
CDK12-210ENST00000585161 KCNH8Q96L42 1107 aa17.61■□□□□ 0.41
CDK12-210ENST00000585161 NAP1L2Q9ULW6 460 aaPredicted RBP17.6■□□□□ 0.41
CDK12-210ENST00000585161 MAGI3Q5TCQ9 1506 aa17.6■□□□□ 0.41
CDK12-210ENST00000585161 ABCA9Q8IUA7 1624 aa17.6■□□□□ 0.41
CDK12-210ENST00000585161 PPRC1Q5VV67 1664 aaKnown RBP17.59■□□□□ 0.41
CDK12-210ENST00000585161 CFAP43Q8NDM7 1665 aa17.59■□□□□ 0.41
CDK12-210ENST00000585161 TROQ12816 1431 aaPredicted RBP17.59■□□□□ 0.41
CDK12-210ENST00000585161 IPO4Q8TEX9 1081 aaKnown RBP17.57■□□□□ 0.4
CDK12-210ENST00000585161 TSPOAP1O95153 1857 aa17.56■□□□□ 0.4
CDK12-210ENST00000585161 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.56■□□□□ 0.4
CDK12-210ENST00000585161 NAP1L5Q96NT1 182 aaPredicted RBP17.56■□□□□ 0.4
CDK12-210ENST00000585161 CD109Q6YHK3 1445 aa17.55■□□□□ 0.4
CDK12-210ENST00000585161 KIF14Q15058 1648 aa17.55■□□□□ 0.4
CDK12-210ENST00000585161 TTC37Q6PGP7 1564 aa17.55■□□□□ 0.4
CDK12-210ENST00000585161 CCER2I3L3R5 266 aa17.55■□□□□ 0.4
CDK12-210ENST00000585161 TIAM1Q13009 1591 aa17.53■□□□□ 0.4
CDK12-210ENST00000585161 MAP3K1Q13233 1512 aa17.51■□□□□ 0.39
CDK12-210ENST00000585161 HOMEZQ8IX15 550 aa17.5■□□□□ 0.39
CDK12-210ENST00000585161 TEX14Q8IWB6 1497 aa17.5■□□□□ 0.39
CDK12-210ENST00000585161 PAXIP1Q6ZW49 1069 aaPredicted RBP17.5■□□□□ 0.39
CDK12-210ENST00000585161 BBXQ8WY36 941 aaPredicted RBP17.5■□□□□ 0.39
CDK12-210ENST00000585161 EHBP1L1Q8N3D4 1523 aa17.49■□□□□ 0.39
CDK12-210ENST00000585161 MTUS2Q5JR59 1369 aa17.47■□□□□ 0.39
CDK12-210ENST00000585161 PDCL3Q9H2J4 239 aa17.47■□□□□ 0.39
CDK12-210ENST00000585161 GTF2E1P29083 439 aaPredicted RBP17.47■□□□□ 0.39
CDK12-210ENST00000585161 LRRC9Q6ZRR7 1453 aa17.45■□□□□ 0.38
CDK12-210ENST00000585161 NCLP19338 710 aaKnown RBP17.45■□□□□ 0.38
CDK12-210ENST00000585161 PLCH2O75038 1416 aa17.44■□□□□ 0.38
CDK12-210ENST00000585161 CANXP27824 592 aaKnown RBP17.44■□□□□ 0.38
CDK12-210ENST00000585161 ARAP3Q8WWN8 1544 aa17.44■□□□□ 0.38
CDK12-210ENST00000585161 MYO5CQ9NQX4 1742 aa17.44■□□□□ 0.38
CDK12-210ENST00000585161 NEO1Q92859 1461 aa17.43■□□□□ 0.38
CDK12-210ENST00000585161 COL17A1Q9UMD9 1497 aaPredicted RBP17.42■□□□□ 0.38
CDK12-210ENST00000585161 KDM6BO15054 1643 aa17.41■□□□□ 0.38
CDK12-210ENST00000585161 FANCAO15360 1455 aa17.41■□□□□ 0.38
CDK12-210ENST00000585161 KANK4Q5T7N3 995 aaPredicted RBP17.41■□□□□ 0.38
CDK12-210ENST00000585161 PREX2Q70Z35 1606 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms