RNA–Protein interactions for RNA: ENST00000584811.5

TVP23C-210, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-210ENST00000584811 NUP160Q12769 1436 aa22.46■■□□□ 1.19
TVP23C-210ENST00000584811 CFDP1Q9UEE9 299 aaPredicted RBP22.44■■□□□ 1.18
TVP23C-210ENST00000584811 KDM5BQ9UGL1 1544 aa22.43■■□□□ 1.18
TVP23C-210ENST00000584811 GCC2Q8IWJ2 1684 aa22.42■■□□□ 1.18
TVP23C-210ENST00000584811 KIF14Q15058 1648 aa22.42■■□□□ 1.18
TVP23C-210ENST00000584811 TROQ12816 1431 aaPredicted RBP22.41■■□□□ 1.18
TVP23C-210ENST00000584811 CARMIL2Q6F5E8 1435 aa22.39■■□□□ 1.18
TVP23C-210ENST00000584811 AKNAQ7Z591 1439 aa22.37■■□□□ 1.17
TVP23C-210ENST00000584811 GPATCH8Q9UKJ3 1502 aaKnown RBP22.37■■□□□ 1.17
TVP23C-210ENST00000584811 L3MBTL2Q969R5 705 aa22.36■■□□□ 1.17
TVP23C-210ENST00000584811 CAMSAP2Q08AD1 1489 aa22.35■■□□□ 1.17
TVP23C-210ENST00000584811 DNMT1P26358 1616 aaKnown RBP22.34■■□□□ 1.17
TVP23C-210ENST00000584811 SLC4A1APQ9BWU0 796 aaKnown RBP22.34■■□□□ 1.17
TVP23C-210ENST00000584811 PLEKHD1A6NEE1 506 aa22.32■■□□□ 1.16
TVP23C-210ENST00000584811 ATP10BO94823 1461 aa22.31■■□□□ 1.16
TVP23C-210ENST00000584811 ROCK1Q13464 1354 aa22.31■■□□□ 1.16
TVP23C-210ENST00000584811 HSPA5P11021 654 aaKnown RBP22.29■■□□□ 1.16
TVP23C-210ENST00000584811 ANKRD30BQ9BXX2 1392 aa22.27■■□□□ 1.16
TVP23C-210ENST00000584811 NBPF8Q3BBV2 869 aa22.26■■□□□ 1.15
TVP23C-210ENST00000584811 NCOA1Q15788 1441 aa22.26■■□□□ 1.15
TVP23C-210ENST00000584811 ABCA8O94911 1581 aa22.25■■□□□ 1.15
TVP23C-210ENST00000584811 PTPRGP23470 1445 aa22.23■■□□□ 1.15
TVP23C-210ENST00000584811 HNRNPMP52272 730 aaKnown RBP eCLIP22.23■■□□□ 1.152e-6■■■■□ 22
TVP23C-210ENST00000584811 WASHC2AQ641Q2 1341 aa22.23■■□□□ 1.15
TVP23C-210ENST00000584811 ANP32CO43423 234 aa22.23■■□□□ 1.15
TVP23C-210ENST00000584811 C11orf95C9JLR9 678 aaPredicted RBP22.21■■□□□ 1.15
TVP23C-210ENST00000584811 PZPP20742 1482 aa22.2■■□□□ 1.14
TVP23C-210ENST00000584811 ABCC10Q5T3U5 1492 aa22.18■■□□□ 1.14
TVP23C-210ENST00000584811 ADCY10Q96PN6 1610 aa22.17■■□□□ 1.14
TVP23C-210ENST00000584811 PKD2Q13563 968 aa22.17■■□□□ 1.14
TVP23C-210ENST00000584811 ITSN2Q9NZM3 1697 aa22.17■■□□□ 1.14
TVP23C-210ENST00000584811 RPRD2Q5VT52 1461 aaKnown RBP22.16■■□□□ 1.14
TVP23C-210ENST00000584811 EIF4G2P78344 907 aaKnown RBP eCLIP22.16■■□□□ 1.14
TVP23C-210ENST00000584811 ERCC6L2Q5T890 1561 aa22.16■■□□□ 1.14
TVP23C-210ENST00000584811 CDC42BPAQ5VT25 1732 aa22.15■■□□□ 1.14
TVP23C-210ENST00000584811 SUPT16HQ9Y5B9 1047 aaKnown RBP22.15■■□□□ 1.14
TVP23C-210ENST00000584811 CHD1O14646 1710 aa22.15■■□□□ 1.14
TVP23C-210ENST00000584811 ZNF326Q5BKZ1 582 aaKnown RBP22.15■■□□□ 1.14
TVP23C-210ENST00000584811 TEX14Q8IWB6 1497 aa22.14■■□□□ 1.13
TVP23C-210ENST00000584811 ANKRD30AQ9BXX3 1397 aa22.13■■□□□ 1.13
TVP23C-210ENST00000584811 ANKRD50Q9ULJ7 1429 aa22.13■■□□□ 1.13
TVP23C-210ENST00000584811 C9orf84Q5VXU9 1444 aa22.11■■□□□ 1.13
TVP23C-210ENST00000584811 ADGRL2O95490 1459 aa22.09■■□□□ 1.13
TVP23C-210ENST00000584811 TSPY4P0CV99 314 aa22.08■■□□□ 1.13
TVP23C-210ENST00000584811 TSPY10P0CW01 314 aa22.08■■□□□ 1.13
TVP23C-210ENST00000584811 NUP155O75694 1391 aa22.08■■□□□ 1.13
TVP23C-210ENST00000584811 CROCC2H7BZ55 1655 aa22.08■■□□□ 1.12
TVP23C-210ENST00000584811 CCER2I3L3R5 266 aa22.08■■□□□ 1.12
TVP23C-210ENST00000584811 ADGBQ8N7X0 1667 aa22.06■■□□□ 1.12
TVP23C-210ENST00000584811 CCDC184Q52MB2 194 aa22.05■■□□□ 1.12
TVP23C-210ENST00000584811 KIAA1107Q9UPP5 1409 aa22.05■■□□□ 1.12
TVP23C-210ENST00000584811 CNGB1Q14028 1251 aaPredicted RBP22.03■■□□□ 1.12
TVP23C-210ENST00000584811 KIF15Q9NS87 1388 aa22.03■■□□□ 1.12
TVP23C-210ENST00000584811 MBD5Q9P267 1494 aa22.02■■□□□ 1.12
TVP23C-210ENST00000584811 BCANQ96GW7 911 aa22.02■■□□□ 1.12
TVP23C-210ENST00000584811 PELP1Q8IZL8 1130 aaKnown RBP22.01■■□□□ 1.11
TVP23C-210ENST00000584811 CCDC7Q96M83 1385 aa21.99■■□□□ 1.11
TVP23C-210ENST00000584811 SAMD9LQ8IVG5 1584 aa21.99■■□□□ 1.11
TVP23C-210ENST00000584811 KDM2AQ9Y2K7 1162 aa21.99■■□□□ 1.11
TVP23C-210ENST00000584811 POLR3GLQ9BT43 218 aa21.98■■□□□ 1.11
TVP23C-210ENST00000584811 KIF7Q2M1P5 1343 aa21.97■■□□□ 1.11
TVP23C-210ENST00000584811 CDC42BPBQ9Y5S2 1711 aa21.97■■□□□ 1.11
TVP23C-210ENST00000584811 TTC37Q6PGP7 1564 aa21.97■■□□□ 1.11
TVP23C-210ENST00000584811 SPATA31E1Q6ZUB1 1445 aa21.96■■□□□ 1.11
TVP23C-210ENST00000584811 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.96■■□□□ 1.111e-7■□□□□ 8.3
TVP23C-210ENST00000584811 SHANK2Q9UPX8 1470 aa21.94■■□□□ 1.1
TVP23C-210ENST00000584811 SYCP2Q9BX26 1530 aa21.93■■□□□ 1.1
TVP23C-210ENST00000584811 SHROOM2Q13796 1616 aa21.93■■□□□ 1.1
TVP23C-210ENST00000584811 FKBP8Q14318 412 aa21.93■■□□□ 1.1
TVP23C-210ENST00000584811 CNTLNQ9NXG0 1405 aa21.93■■□□□ 1.1
TVP23C-210ENST00000584811 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.93■■□□□ 1.1
TVP23C-210ENST00000584811 ARHGAP5Q13017 1502 aa21.92■■□□□ 1.1
TVP23C-210ENST00000584811 HNRNPUQ00839 825 aaKnown RBP eCLIP21.92■■□□□ 1.1
TVP23C-210ENST00000584811 CCDC141Q6ZP82 1450 aa21.91■■□□□ 1.1
TVP23C-210ENST00000584811 PREX2Q70Z35 1606 aa21.9■■□□□ 1.1
TVP23C-210ENST00000584811 DCAF11Q8TEB1 546 aa21.88■■□□□ 1.09
TVP23C-210ENST00000584811 PRKRIP1Q9H875 184 aaPredicted RBP21.88■■□□□ 1.09
TVP23C-210ENST00000584811 USP47Q96K76 1375 aa21.88■■□□□ 1.09
TVP23C-210ENST00000584811 ABCC2Q92887 1545 aa21.88■■□□□ 1.09
TVP23C-210ENST00000584811 ARHGEF5Q12774 1597 aa21.86■■□□□ 1.09
TVP23C-210ENST00000584811 RGL3Q3MIN7 710 aa21.86■■□□□ 1.09
TVP23C-210ENST00000584811 ARHGEF12Q9NZN5 1544 aa21.85■■□□□ 1.09
TVP23C-210ENST00000584811 FAM9BQ8IZU0 186 aa21.85■■□□□ 1.09
TVP23C-210ENST00000584811 CARD11Q9BXL7 1154 aa21.82■■□□□ 1.08
TVP23C-210ENST00000584811 BCORL1Q5H9F3 1711 aa21.82■■□□□ 1.08
TVP23C-210ENST00000584811 FAM135AQ9P2D6 1515 aa21.81■■□□□ 1.08
TVP23C-210ENST00000584811 PLEKHH2Q8IVE3 1493 aa21.81■■□□□ 1.08
TVP23C-210ENST00000584811 SENP3-EIF4A1A0A087X0R7 540 aa21.81■■□□□ 1.08
TVP23C-210ENST00000584811 MRS2Q9HD23 443 aa21.8■■□□□ 1.08
TVP23C-210ENST00000584811 KDM5DQ9BY66 1539 aa21.79■■□□□ 1.08
TVP23C-210ENST00000584811 ST20-MTHFSA0A0A6YYL1 179 aa21.78■■□□□ 1.08
TVP23C-210ENST00000584811 RSPH4AQ5TD94 716 aa21.78■■□□□ 1.08
TVP23C-210ENST00000584811 CLASP1Q7Z460 1538 aa21.77■■□□□ 1.08
TVP23C-210ENST00000584811 AFAP1Q8N556 730 aa21.77■■□□□ 1.08
TVP23C-210ENST00000584811 ZCCHC11Q5TAX3 1644 aaKnown RBP21.76■■□□□ 1.07
TVP23C-210ENST00000584811 IRX6P78412 446 aaPredicted RBP21.76■■□□□ 1.07
TVP23C-210ENST00000584811 TRAPPC8Q9Y2L5 1435 aa21.75■■□□□ 1.07
TVP23C-210ENST00000584811 PLA2R1Q13018 1463 aa21.75■■□□□ 1.07
TVP23C-210ENST00000584811 NBPF1Q3BBV0 1214 aa21.74■■□□□ 1.07
TVP23C-210ENST00000584811 KDM5CP41229 1560 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms