RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 SPDYE6P0CI01 402 aa13.4□□□□□ -0.26
SMCHD1-210ENST00000583800 SPDYE2Q495Y8 402 aa13.4□□□□□ -0.26
SMCHD1-210ENST00000583800 CFAP43Q8NDM7 1665 aa13.4□□□□□ -0.26
SMCHD1-210ENST00000583800 GOLGA3Q08378 1498 aa13.39□□□□□ -0.27
SMCHD1-210ENST00000583800 PRXQ9BXM0 1461 aa13.36□□□□□ -0.27
SMCHD1-210ENST00000583800 MAGI3Q5TCQ9 1506 aa13.34□□□□□ -0.27
SMCHD1-210ENST00000583800 CD109Q6YHK3 1445 aa13.33□□□□□ -0.28
SMCHD1-210ENST00000583800 KCNH8Q96L42 1107 aa13.32□□□□□ -0.28
SMCHD1-210ENST00000583800 HECW2Q9P2P5 1572 aa13.31□□□□□ -0.28
SMCHD1-210ENST00000583800 KIF21BO75037 1637 aa13.31□□□□□ -0.28
SMCHD1-210ENST00000583800 PRKAR2AP13861 404 aaKnown RBP13.29□□□□□ -0.28
SMCHD1-210ENST00000583800 RTN4Q9NQC3 1192 aaKnown RBP13.29□□□□□ -0.28
SMCHD1-210ENST00000583800 SAMD9Q5K651 1589 aa13.28□□□□□ -0.28
SMCHD1-210ENST00000583800 ARID3CA6NKF2 412 aa13.28□□□□□ -0.28
SMCHD1-210ENST00000583800 AMER1Q5JTC6 1135 aaPredicted RBP13.27□□□□□ -0.29
SMCHD1-210ENST00000583800 P3H3Q8IVL6 736 aa13.27□□□□□ -0.29
SMCHD1-210ENST00000583800 ATP10BO94823 1461 aa13.26□□□□□ -0.29
SMCHD1-210ENST00000583800 ABCA9Q8IUA7 1624 aa13.26□□□□□ -0.29
SMCHD1-210ENST00000583800 SPDYE1Q8NFV5 336 aaPredicted RBP13.26□□□□□ -0.29
SMCHD1-210ENST00000583800 RAPGEF6Q8TEU7 1601 aa13.26□□□□□ -0.29
SMCHD1-210ENST00000583800 CLEC11AQ9Y240 323 aa13.26□□□□□ -0.29
SMCHD1-210ENST00000583800 ARAP3Q8WWN8 1544 aa13.23□□□□□ -0.29
SMCHD1-210ENST00000583800 ILDR1Q86SU0 546 aaPredicted RBP13.23□□□□□ -0.29
SMCHD1-210ENST00000583800 MKRN4PQ13434 485 aaPredicted RBP13.22□□□□□ -0.29
SMCHD1-210ENST00000583800 C19orf67A6NJJ6 358 aa13.2□□□□□ -0.3
SMCHD1-210ENST00000583800 FAM9AQ8IZU1 332 aaPredicted RBP13.19□□□□□ -0.3
SMCHD1-210ENST00000583800 FRMPD1Q5SYB0 1578 aa13.19□□□□□ -0.3
SMCHD1-210ENST00000583800 NUP153P49790 1475 aaKnown RBP13.18□□□□□ -0.3
SMCHD1-210ENST00000583800 ZNF692Q9BU19 519 aaPredicted RBP13.18□□□□□ -0.3
SMCHD1-210ENST00000583800 SSUH2Q9Y2M2 353 aa13.18□□□□□ -0.3
SMCHD1-210ENST00000583800 FHOD3Q2V2M9 1422 aa13.17□□□□□ -0.3
SMCHD1-210ENST00000583800 ADAMTSL3P82987 1691 aa13.17□□□□□ -0.3
SMCHD1-210ENST00000583800 RANGAP1P46060 587 aaPredicted RBP13.16□□□□□ -0.3
SMCHD1-210ENST00000583800 NEO1Q92859 1461 aa13.16□□□□□ -0.3
SMCHD1-210ENST00000583800 BCORL1Q5H9F3 1711 aa13.14□□□□□ -0.31
SMCHD1-210ENST00000583800 RAPGEF3O95398 923 aa13.14□□□□□ -0.31
SMCHD1-210ENST00000583800 PHLDB1Q86UU1 1377 aa13.14□□□□□ -0.31
SMCHD1-210ENST00000583800 EEA1Q15075 1411 aa13.13□□□□□ -0.31
SMCHD1-210ENST00000583800 RICTORQ6R327 1708 aa13.13□□□□□ -0.31
SMCHD1-210ENST00000583800 MADDQ8WXG6 1647 aa13.13□□□□□ -0.31
SMCHD1-210ENST00000583800 PTPRMP28827 1452 aa13.12□□□□□ -0.31
SMCHD1-210ENST00000583800 ARHGEF40Q8TER5 1519 aa13.11□□□□□ -0.31
SMCHD1-210ENST00000583800 TTC37Q6PGP7 1564 aa13.11□□□□□ -0.31
SMCHD1-210ENST00000583800 EFCAB5A4FU69 1503 aa13.1□□□□□ -0.31
SMCHD1-210ENST00000583800 GABBR2O75899 941 aa13.1□□□□□ -0.31
SMCHD1-210ENST00000583800 CFAP74Q9C0B2 1584 aa13.1□□□□□ -0.31
SMCHD1-210ENST00000583800 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.09□□□□□ -0.31
SMCHD1-210ENST00000583800 RIMS1Q86UR5 1692 aaKnown RBP13.09□□□□□ -0.31
SMCHD1-210ENST00000583800 DENND4BO75064 1496 aaPredicted RBP13.07□□□□□ -0.32
SMCHD1-210ENST00000583800 SIGLEC1Q9BZZ2 1709 aa13.07□□□□□ -0.32
SMCHD1-210ENST00000583800 CDK13Q14004 1512 aaKnown RBP13.07□□□□□ -0.32
SMCHD1-210ENST00000583800 AKNAQ7Z591 1439 aa13.06□□□□□ -0.32
SMCHD1-210ENST00000583800 FANCAO15360 1455 aa13.06□□□□□ -0.32
SMCHD1-210ENST00000583800 CHADLQ6NUI6 762 aa13.06□□□□□ -0.32
SMCHD1-210ENST00000583800 ARID4BQ4LE39 1312 aaPredicted RBP13.06□□□□□ -0.32
SMCHD1-210ENST00000583800 PLEKHD1A6NEE1 506 aa13.05□□□□□ -0.32
SMCHD1-210ENST00000583800 ZMYM4Q5VZL5 1548 aa13.04□□□□□ -0.32
SMCHD1-210ENST00000583800 PCF11O94913 1555 aaKnown RBP13.04□□□□□ -0.32
SMCHD1-210ENST00000583800 ZFYVE16Q7Z3T8 1539 aa13.03□□□□□ -0.32
SMCHD1-210ENST00000583800 LMTK3Q96Q04 1460 aa13.02□□□□□ -0.33
SMCHD1-210ENST00000583800 MYO5CQ9NQX4 1742 aa13.02□□□□□ -0.33
SMCHD1-210ENST00000583800 YEATS2Q9ULM3 1422 aa13.01□□□□□ -0.33
SMCHD1-210ENST00000583800 HECW1Q76N89 1606 aa13.01□□□□□ -0.33
SMCHD1-210ENST00000583800 FER1L4A9Z1Z3 1794 aa13.01□□□□□ -0.33
SMCHD1-210ENST00000583800 LHX8Q68G74 356 aa13□□□□□ -0.33
SMCHD1-210ENST00000583800 PRR29P0C7W0 189 aa12.99□□□□□ -0.33
SMCHD1-210ENST00000583800 LRRIQ1Q96JM4 1722 aa12.99□□□□□ -0.33
SMCHD1-210ENST00000583800 KIF14Q15058 1648 aa12.98□□□□□ -0.33
SMCHD1-210ENST00000583800 POGZQ7Z3K3 1410 aa12.97□□□□□ -0.33
SMCHD1-210ENST00000583800 ARHGAP35Q9NRY4 1499 aa12.97□□□□□ -0.33
SMCHD1-210ENST00000583800 PLCH2O75038 1416 aa12.96□□□□□ -0.33
SMCHD1-210ENST00000583800 MAGI2Q86UL8 1455 aa12.96□□□□□ -0.34
SMCHD1-210ENST00000583800 FMN1Q68DA7 1419 aa12.96□□□□□ -0.34
SMCHD1-210ENST00000583800 SCAPERQ9BY12 1400 aa12.96□□□□□ -0.34
SMCHD1-210ENST00000583800 FBXO41Q8TF61 875 aa12.95□□□□□ -0.34
SMCHD1-210ENST00000583800 UBTFP17480 764 aaKnown RBP12.94□□□□□ -0.34
SMCHD1-210ENST00000583800 ATP1B4Q9UN42 357 aaPredicted RBP12.94□□□□□ -0.34
SMCHD1-210ENST00000583800 MLECQ14165 292 aa12.93□□□□□ -0.34
SMCHD1-210ENST00000583800 HSPA2P54652 639 aa12.92□□□□□ -0.34
SMCHD1-210ENST00000583800 CDC42BPBQ9Y5S2 1711 aa12.91□□□□□ -0.34
SMCHD1-210ENST00000583800 C9orf84Q5VXU9 1444 aa12.91□□□□□ -0.34
SMCHD1-210ENST00000583800 ARHGAP5Q13017 1502 aa12.91□□□□□ -0.34
SMCHD1-210ENST00000583800 ARHGEF12Q9NZN5 1544 aa12.91□□□□□ -0.34
SMCHD1-210ENST00000583800 TROQ12816 1431 aaPredicted RBP12.9□□□□□ -0.34
SMCHD1-210ENST00000583800 ATP10AO60312 1499 aa12.9□□□□□ -0.34
SMCHD1-210ENST00000583800 KDM5CP41229 1560 aa12.9□□□□□ -0.35
SMCHD1-210ENST00000583800 PREX1Q8TCU6 1659 aa12.89□□□□□ -0.35
SMCHD1-210ENST00000583800 EFCAB2Q5VUJ9 269 aa12.88□□□□□ -0.35
SMCHD1-210ENST00000583800 ZNF518AQ6AHZ1 1483 aa12.88□□□□□ -0.35
SMCHD1-210ENST00000583800 DIP2CQ9Y2E4 1556 aa12.88□□□□□ -0.35
SMCHD1-210ENST00000583800 PREX2Q70Z35 1606 aa12.88□□□□□ -0.35
SMCHD1-210ENST00000583800 CDK11AQ9UQ88 783 aaPredicted RBP12.87□□□□□ -0.35
SMCHD1-210ENST00000583800 ABCA6Q8N139 1617 aa12.87□□□□□ -0.35
SMCHD1-210ENST00000583800 CLIP1P30622 1438 aa12.87□□□□□ -0.35
SMCHD1-210ENST00000583800 ITSN2Q9NZM3 1697 aa12.86□□□□□ -0.35
SMCHD1-210ENST00000583800 CDC42BPAQ5VT25 1732 aa12.85□□□□□ -0.35
SMCHD1-210ENST00000583800 ABCC1P33527 1531 aa12.84□□□□□ -0.35
SMCHD1-210ENST00000583800 CD44P16070 742 aaKnown RBP12.84□□□□□ -0.35
SMCHD1-210ENST00000583800 REREQ9P2R6 1566 aa12.83□□□□□ -0.36
SMCHD1-210ENST00000583800 POTEIP0CG38 1075 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms