RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 ASXL2Q76L83 1435 aa13.98□□□□□ -0.17
PPP4R1-225ENST00000583438 PTPRGP23470 1445 aa13.97□□□□□ -0.17
PPP4R1-225ENST00000583438 KIAA0556O60303 1618 aa13.97□□□□□ -0.17
PPP4R1-225ENST00000583438 CHRDL2Q6WN34 429 aa13.96□□□□□ -0.17
PPP4R1-225ENST00000583438 CTTNBP2Q8WZ74 1663 aa13.95□□□□□ -0.18
PPP4R1-225ENST00000583438 UHRF1BP1LA0JNW5 1464 aa13.95□□□□□ -0.18
PPP4R1-225ENST00000583438 FXR2P51116 673 aaKnown RBP eCLIP13.95□□□□□ -0.183e-9■■■■■ 34.7
PPP4R1-225ENST00000583438 NUBP1P53384 320 aa13.95□□□□□ -0.18
PPP4R1-225ENST00000583438 TNIKQ9UKE5 1360 aa13.95□□□□□ -0.18
PPP4R1-225ENST00000583438 UGGT2Q9NYU1 1516 aa13.95□□□□□ -0.18
PPP4R1-225ENST00000583438 TTBK1Q5TCY1 1321 aaPredicted RBP13.94□□□□□ -0.18
PPP4R1-225ENST00000583438 KDM5BQ9UGL1 1544 aa13.93□□□□□ -0.18
PPP4R1-225ENST00000583438 EPRSP07814 1512 aaKnown RBP13.91□□□□□ -0.18
PPP4R1-225ENST00000583438 NPM1P06748 294 aaKnown RBP eCLIP13.91□□□□□ -0.18
PPP4R1-225ENST00000583438 CIZ1Q9ULV3 898 aaPredicted RBP13.91□□□□□ -0.18
PPP4R1-225ENST00000583438 UACAQ9BZF9 1416 aa13.9□□□□□ -0.18
PPP4R1-225ENST00000583438 PRKAR2AP13861 404 aaKnown RBP13.9□□□□□ -0.18
PPP4R1-225ENST00000583438 PLB1Q6P1J6 1458 aa13.89□□□□□ -0.19
PPP4R1-225ENST00000583438 ADGRL1O94910 1474 aa13.88□□□□□ -0.19
PPP4R1-225ENST00000583438 CARMIL2Q6F5E8 1435 aa13.88□□□□□ -0.19
PPP4R1-225ENST00000583438 ECM2O94769 699 aaPredicted RBP13.87□□□□□ -0.19
PPP4R1-225ENST00000583438 PIP4P2Q8N4L2 257 aa13.87□□□□□ -0.19
PPP4R1-225ENST00000583438 RAPGEF2Q9Y4G8 1499 aa13.87□□□□□ -0.19
PPP4R1-225ENST00000583438 ABCA8O94911 1581 aa13.86□□□□□ -0.19
PPP4R1-225ENST00000583438 RASEFQ8IZ41 740 aa13.85□□□□□ -0.19
PPP4R1-225ENST00000583438 FARP1Q9Y4F1 1045 aaPredicted RBP13.85□□□□□ -0.19
PPP4R1-225ENST00000583438 DCAF8Q5TAQ9 597 aa13.82□□□□□ -0.2
PPP4R1-225ENST00000583438 GSE1Q14687 1217 aa13.81□□□□□ -0.2
PPP4R1-225ENST00000583438 CFAP43Q8NDM7 1665 aa13.81□□□□□ -0.2
PPP4R1-225ENST00000583438 WDR7Q9Y4E6 1490 aa13.8□□□□□ -0.2
PPP4R1-225ENST00000583438 HECW2Q9P2P5 1572 aa13.8□□□□□ -0.2
PPP4R1-225ENST00000583438 KIF21BO75037 1637 aa13.79□□□□□ -0.2
PPP4R1-225ENST00000583438 FAM212AQ96EL1 285 aa13.78□□□□□ -0.2
PPP4R1-225ENST00000583438 RGL2O15211 777 aa13.77□□□□□ -0.21
PPP4R1-225ENST00000583438 PRXQ9BXM0 1461 aa13.76□□□□□ -0.21
PPP4R1-225ENST00000583438 TEX14Q8IWB6 1497 aa13.74□□□□□ -0.21
PPP4R1-225ENST00000583438 MAGI3Q5TCQ9 1506 aa13.73□□□□□ -0.21
PPP4R1-225ENST00000583438 SAMD9Q5K651 1589 aa13.71□□□□□ -0.21
PPP4R1-225ENST00000583438 ILDR1Q86SU0 546 aaPredicted RBP13.71□□□□□ -0.21
PPP4R1-225ENST00000583438 FRMPD1Q5SYB0 1578 aa13.71□□□□□ -0.22
PPP4R1-225ENST00000583438 ABCA9Q8IUA7 1624 aa13.69□□□□□ -0.22
PPP4R1-225ENST00000583438 SIGLEC1Q9BZZ2 1709 aa13.68□□□□□ -0.22
PPP4R1-225ENST00000583438 TSPYL2Q9H2G4 693 aaPredicted RBP13.68□□□□□ -0.22
PPP4R1-225ENST00000583438 CD109Q6YHK3 1445 aa13.67□□□□□ -0.22
PPP4R1-225ENST00000583438 ATP10BO94823 1461 aa13.67□□□□□ -0.22
PPP4R1-225ENST00000583438 GOLGA3Q08378 1498 aa13.67□□□□□ -0.22
PPP4R1-225ENST00000583438 ADAMTSL3P82987 1691 aa13.66□□□□□ -0.22
PPP4R1-225ENST00000583438 RNF25Q96BH1 459 aaPredicted RBP13.65□□□□□ -0.22
PPP4R1-225ENST00000583438 RAPGEF6Q8TEU7 1601 aa13.64□□□□□ -0.23
PPP4R1-225ENST00000583438 ARID3CA6NKF2 412 aa13.64□□□□□ -0.23
PPP4R1-225ENST00000583438 ARAP3Q8WWN8 1544 aa13.64□□□□□ -0.23
PPP4R1-225ENST00000583438 PYGBP11216 843 aa13.62□□□□□ -0.23
PPP4R1-225ENST00000583438 CHRM1P11229 460 aaPredicted RBP13.62□□□□□ -0.23
PPP4R1-225ENST00000583438 KCNH8Q96L42 1107 aa13.62□□□□□ -0.23
PPP4R1-225ENST00000583438 RICTORQ6R327 1708 aa13.61□□□□□ -0.23
PPP4R1-225ENST00000583438 BCORL1Q5H9F3 1711 aa13.6□□□□□ -0.23
PPP4R1-225ENST00000583438 P3H3Q8IVL6 736 aa13.6□□□□□ -0.23
PPP4R1-225ENST00000583438 MADDQ8WXG6 1647 aa13.6□□□□□ -0.23
PPP4R1-225ENST00000583438 NUP153P49790 1475 aaKnown RBP13.6□□□□□ -0.23
PPP4R1-225ENST00000583438 CCDC61Q9Y6R9 512 aa13.57□□□□□ -0.24
PPP4R1-225ENST00000583438 TTC37Q6PGP7 1564 aa13.56□□□□□ -0.24
PPP4R1-225ENST00000583438 RIMS1Q86UR5 1692 aaKnown RBP13.54□□□□□ -0.24
PPP4R1-225ENST00000583438 RIOK3O14730 519 aaKnown RBP13.54□□□□□ -0.24
PPP4R1-225ENST00000583438 FHOD3Q2V2M9 1422 aa13.54□□□□□ -0.24
PPP4R1-225ENST00000583438 PTPRMP28827 1452 aa13.54□□□□□ -0.24
PPP4R1-225ENST00000583438 ARHGEF40Q8TER5 1519 aa13.54□□□□□ -0.24
PPP4R1-225ENST00000583438 LRRIQ1Q96JM4 1722 aa13.53□□□□□ -0.24
PPP4R1-225ENST00000583438 PAK3O75914 559 aaPredicted RBP13.52□□□□□ -0.25
PPP4R1-225ENST00000583438 RAPGEF3O95398 923 aa13.52□□□□□ -0.25
PPP4R1-225ENST00000583438 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.52□□□□□ -0.25
PPP4R1-225ENST00000583438 CD44P16070 742 aaKnown RBP13.51□□□□□ -0.25
PPP4R1-225ENST00000583438 NEO1Q92859 1461 aa13.5□□□□□ -0.25
PPP4R1-225ENST00000583438 CHGAP10645 457 aaKnown RBP13.5□□□□□ -0.25
PPP4R1-225ENST00000583438 CDK13Q14004 1512 aaKnown RBP13.49□□□□□ -0.25
PPP4R1-225ENST00000583438 LMTK3Q96Q04 1460 aa13.48□□□□□ -0.25
PPP4R1-225ENST00000583438 ZRANB1Q9UGI0 708 aa13.48□□□□□ -0.25
PPP4R1-225ENST00000583438 PCF11O94913 1555 aaKnown RBP13.47□□□□□ -0.25
PPP4R1-225ENST00000583438 SLC24A1O60721 1099 aa13.47□□□□□ -0.25
PPP4R1-225ENST00000583438 ZMYM4Q5VZL5 1548 aa13.46□□□□□ -0.25
PPP4R1-225ENST00000583438 C19orf67A6NJJ6 358 aa13.46□□□□□ -0.25
PPP4R1-225ENST00000583438 BBXQ8WY36 941 aaPredicted RBP13.45□□□□□ -0.26
PPP4R1-225ENST00000583438 YEATS2Q9ULM3 1422 aa13.45□□□□□ -0.26
PPP4R1-225ENST00000583438 KIF14Q15058 1648 aa13.44□□□□□ -0.26
PPP4R1-225ENST00000583438 VGFO15240 615 aaPredicted RBP13.44□□□□□ -0.26
PPP4R1-225ENST00000583438 HECW1Q76N89 1606 aa13.43□□□□□ -0.26
PPP4R1-225ENST00000583438 FER1L4A9Z1Z3 1794 aa13.43□□□□□ -0.26
PPP4R1-225ENST00000583438 RANGAP1P46060 587 aaPredicted RBP13.43□□□□□ -0.26
PPP4R1-225ENST00000583438 HS6ST3Q8IZP7 471 aa13.43□□□□□ -0.26
PPP4R1-225ENST00000583438 CFAP74Q9C0B2 1584 aa13.43□□□□□ -0.26
PPP4R1-225ENST00000583438 PLCB2Q00722 1185 aa13.42□□□□□ -0.26
PPP4R1-225ENST00000583438 KIF12Q96FN5 646 aa13.42□□□□□ -0.26
PPP4R1-225ENST00000583438 PCDHB8Q9UN66 801 aa13.42□□□□□ -0.26
PPP4R1-225ENST00000583438 PCDHB13Q9Y5F0 798 aa13.42□□□□□ -0.26
PPP4R1-225ENST00000583438 FANCAO15360 1455 aa13.42□□□□□ -0.26
PPP4R1-225ENST00000583438 EFCAB5A4FU69 1503 aa13.41□□□□□ -0.26
PPP4R1-225ENST00000583438 MAP3K13O43283 966 aa13.41□□□□□ -0.26
PPP4R1-225ENST00000583438 PHF12Q96QT6 1004 aa13.41□□□□□ -0.26
PPP4R1-225ENST00000583438 TAOK2Q9UL54 1235 aa13.41□□□□□ -0.26
PPP4R1-225ENST00000583438 AKNAQ7Z591 1439 aa13.4□□□□□ -0.26
PPP4R1-225ENST00000583438 MYO5CQ9NQX4 1742 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms