RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 KIF20AO95235 890 aa12.18□□□□□ -0.46
SKA2-207ENST00000583380 IPO4Q8TEX9 1081 aaKnown RBP12.18□□□□□ -0.46
SKA2-207ENST00000583380 KTN1Q86UP2 1357 aaKnown RBP12.18□□□□□ -0.46
SKA2-207ENST00000583380 RSPH4AQ5TD94 716 aa12.17□□□□□ -0.46
SKA2-207ENST00000583380 RRAGDQ9NQL2 400 aaPredicted RBP12.17□□□□□ -0.46
SKA2-207ENST00000583380 SYNJ1O43426 1573 aa12.17□□□□□ -0.46
SKA2-207ENST00000583380 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.16□□□□□ -0.46
SKA2-207ENST00000583380 NPM2Q86SE8 214 aaKnown RBP12.16□□□□□ -0.46
SKA2-207ENST00000583380 A0A0U1RQG5 324 aaPredicted RBP12.15□□□□□ -0.46
SKA2-207ENST00000583380 GTPBP4Q9BZE4 634 aaKnown RBP12.15□□□□□ -0.46
SKA2-207ENST00000583380 INSRP06213 1382 aa12.15□□□□□ -0.46
SKA2-207ENST00000583380 MROH2BQ7Z745 1585 aa12.14□□□□□ -0.47
SKA2-207ENST00000583380 PRKRIP1Q9H875 184 aaPredicted RBP12.14□□□□□ -0.47
SKA2-207ENST00000583380 MRS2Q9HD23 443 aa12.14□□□□□ -0.47
SKA2-207ENST00000583380 FSD2A1L4K1 749 aa12.13□□□□□ -0.47
SKA2-207ENST00000583380 ESPNB1AK53 854 aa12.13□□□□□ -0.47
SKA2-207ENST00000583380 MYH16Q9H6N6 1097 aa12.13□□□□□ -0.47
SKA2-207ENST00000583380 HS1BP3Q53T59 392 aa12.12□□□□□ -0.47
SKA2-207ENST00000583380 DCAF11Q8TEB1 546 aa12.12□□□□□ -0.47
SKA2-207ENST00000583380 PHLDB1Q86UU1 1377 aa12.12□□□□□ -0.47
SKA2-207ENST00000583380 FAM161AQ3B820 660 aa12.11□□□□□ -0.47
SKA2-207ENST00000583380 ABCA5Q8WWZ7 1642 aa12.11□□□□□ -0.47
SKA2-207ENST00000583380 EIF4G2P78344 907 aaKnown RBP eCLIP12.1□□□□□ -0.476e-6■■■■□ 25.1
SKA2-207ENST00000583380 SCAPERQ9BY12 1400 aa12.1□□□□□ -0.47
SKA2-207ENST00000583380 LETM1O95202 739 aaPredicted RBP12.09□□□□□ -0.47
SKA2-207ENST00000583380 CSPP1Q1MSJ5 1256 aa12.09□□□□□ -0.47
SKA2-207ENST00000583380 SCRIBQ14160 1630 aa12.08□□□□□ -0.48
SKA2-207ENST00000583380 ZMYM3Q14202 1370 aa12.08□□□□□ -0.48
SKA2-207ENST00000583380 ZMYM4Q5VZL5 1548 aa12.08□□□□□ -0.48
SKA2-207ENST00000583380 WIZO95785 1651 aa12.08□□□□□ -0.48
SKA2-207ENST00000583380 DYNC1I1O14576 645 aa12.07□□□□□ -0.48
SKA2-207ENST00000583380 RRP1P56182 461 aaKnown RBP12.07□□□□□ -0.48
SKA2-207ENST00000583380 CENPQQ7L2Z9 268 aaPredicted RBP12.07□□□□□ -0.48
SKA2-207ENST00000583380 NAP1L2Q9ULW6 460 aaPredicted RBP12.07□□□□□ -0.48
SKA2-207ENST00000583380 FRAT2O75474 233 aaPredicted RBP12.06□□□□□ -0.48
SKA2-207ENST00000583380 OFD1O75665 1012 aa12.06□□□□□ -0.48
SKA2-207ENST00000583380 MCM5P33992 734 aa12.06□□□□□ -0.48
SKA2-207ENST00000583380 BBXQ8WY36 941 aaPredicted RBP12.06□□□□□ -0.48
SKA2-207ENST00000583380 BCL11BQ9C0K0 894 aaPredicted RBP12.06□□□□□ -0.48
SKA2-207ENST00000583380 CCDC18Q5T9S5 1454 aa12.06□□□□□ -0.48
SKA2-207ENST00000583380 DMTNQ08495 405 aa12.05□□□□□ -0.48
SKA2-207ENST00000583380 SKOR2Q2VWA4 1001 aaPredicted RBP12.05□□□□□ -0.48
SKA2-207ENST00000583380 NCOA1Q15788 1441 aa12.04□□□□□ -0.48
SKA2-207ENST00000583380 DDX11L8A8MPP1 907 aa12.04□□□□□ -0.48
SKA2-207ENST00000583380 ROCK2O75116 1388 aaKnown RBP12.04□□□□□ -0.48
SKA2-207ENST00000583380 UACAQ9BZF9 1416 aa12.03□□□□□ -0.48
SKA2-207ENST00000583380 BRD2P25440 801 aaKnown RBP12.03□□□□□ -0.48
SKA2-207ENST00000583380 POLR1AO95602 1720 aaPredicted RBP12.03□□□□□ -0.48
SKA2-207ENST00000583380 ARAP1Q96P48 1450 aa12.02□□□□□ -0.48
SKA2-207ENST00000583380 XRCC6P12956 609 aaKnown RBP eCLIP12.02□□□□□ -0.49
SKA2-207ENST00000583380 CCDC173Q0VFZ6 552 aa12.02□□□□□ -0.49
SKA2-207ENST00000583380 FAM9BQ8IZU0 186 aa12.02□□□□□ -0.49
SKA2-207ENST00000583380 CCDC7Q96M83 1385 aa12.01□□□□□ -0.49
SKA2-207ENST00000583380 AKNAQ7Z591 1439 aa12.01□□□□□ -0.49
SKA2-207ENST00000583380 SLC20A2Q08357 652 aa12□□□□□ -0.49
SKA2-207ENST00000583380 ZSCAN30Q86W11 494 aa12□□□□□ -0.49
SKA2-207ENST00000583380 FTSJ3Q8IY81 847 aaKnown RBP12□□□□□ -0.49
SKA2-207ENST00000583380 TSPYL1Q9H0U9 437 aa12□□□□□ -0.49
SKA2-207ENST00000583380 UPF2Q9HAU5 1272 aaKnown RBP12□□□□□ -0.49
SKA2-207ENST00000583380 RCAN3Q9UKA8 241 aa12□□□□□ -0.49
SKA2-207ENST00000583380 PLEKHH2Q8IVE3 1493 aa12□□□□□ -0.49
SKA2-207ENST00000583380 RGS3P49796 1198 aa11.99□□□□□ -0.49
SKA2-207ENST00000583380 KIAA1211Q6ZU35 1233 aa11.99□□□□□ -0.49
SKA2-207ENST00000583380 RUSC2Q8N2Y8 1516 aa11.99□□□□□ -0.49
SKA2-207ENST00000583380 MSNP26038 577 aaKnown RBP11.98□□□□□ -0.49
SKA2-207ENST00000583380 FAM193AP78312 1265 aa11.98□□□□□ -0.49
SKA2-207ENST00000583380 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.98□□□□□ -0.49
SKA2-207ENST00000583380 CECR2Q9BXF3 1484 aa11.97□□□□□ -0.49
SKA2-207ENST00000583380 RAPGEF2Q9Y4G8 1499 aa11.97□□□□□ -0.49
SKA2-207ENST00000583380 CCDC94Q9BW85 323 aaPredicted RBP11.97□□□□□ -0.49
SKA2-207ENST00000583380 BCCIPQ9P287 314 aaKnown RBP eCLIP11.97□□□□□ -0.49
SKA2-207ENST00000583380 PRXQ9BXM0 1461 aa11.96□□□□□ -0.49
SKA2-207ENST00000583380 EIF3AQ14152 1382 aaKnown RBP11.96□□□□□ -0.49
SKA2-207ENST00000583380 CDK11BP21127 795 aaKnown RBP11.96□□□□□ -0.49
SKA2-207ENST00000583380 TEX2Q8IWB9 1127 aa11.96□□□□□ -0.49
SKA2-207ENST00000583380 STAC3Q96MF2 364 aa11.96□□□□□ -0.49
SKA2-207ENST00000583380 SIN3AQ96ST3 1273 aa11.96□□□□□ -0.49
SKA2-207ENST00000583380 GRPEL1Q9HAV7 217 aa11.96□□□□□ -0.49
SKA2-207ENST00000583380 MIA2Q96PC5 1412 aa11.95□□□□□ -0.5
SKA2-207ENST00000583380 BRD4O60885 1362 aaPredicted RBP11.95□□□□□ -0.5
SKA2-207ENST00000583380 MAPK8IP3Q9UPT6 1336 aa11.95□□□□□ -0.5
SKA2-207ENST00000583380 GTF2E1P29083 439 aaPredicted RBP11.95□□□□□ -0.5
SKA2-207ENST00000583380 IBTKQ9P2D0 1353 aaPredicted RBP11.94□□□□□ -0.5
SKA2-207ENST00000583380 TIAM1Q13009 1591 aa11.94□□□□□ -0.5
SKA2-207ENST00000583380 HMGN5P82970 282 aaKnown RBP11.94□□□□□ -0.5
SKA2-207ENST00000583380 PPP1R9BQ96SB3 815 aa11.94□□□□□ -0.5
SKA2-207ENST00000583380 HSPA5P11021 654 aaKnown RBP11.93□□□□□ -0.5
SKA2-207ENST00000583380 KANK4Q5T7N3 995 aaPredicted RBP11.93□□□□□ -0.5
SKA2-207ENST00000583380 CREBRFQ8IUR6 639 aa11.93□□□□□ -0.5
SKA2-207ENST00000583380 POGKQ9P215 609 aa11.93□□□□□ -0.5
SKA2-207ENST00000583380 NINLQ9Y2I6 1382 aa11.92□□□□□ -0.5
SKA2-207ENST00000583380 ZNF500O60304 480 aaPredicted RBP11.92□□□□□ -0.5
SKA2-207ENST00000583380 MCM4P33991 863 aa11.92□□□□□ -0.5
SKA2-207ENST00000583380 RALBP1Q15311 655 aa11.92□□□□□ -0.5
SKA2-207ENST00000583380 PPP4R3BQ5MIZ7 849 aa11.92□□□□□ -0.5
SKA2-207ENST00000583380 ARID3AQ99856 593 aa11.92□□□□□ -0.5
SKA2-207ENST00000583380 CHMP5Q9NZZ3 219 aa11.92□□□□□ -0.5
SKA2-207ENST00000583380 HFM1A2PYH4 1435 aa11.92□□□□□ -0.5
SKA2-207ENST00000583380 LRPPRCP42704 1394 aaKnown RBP11.92□□□□□ -0.5
SKA2-207ENST00000583380 DNAJC2Q99543 621 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms