RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 DAPK1P53355 1430 aa19.43■□□□□ 0.7
SRSF1-205ENST00000582730 FOXD1Q16676 465 aa19.42■□□□□ 0.7
SRSF1-205ENST00000582730 GCC2Q8IWJ2 1684 aa19.42■□□□□ 0.7
SRSF1-205ENST00000582730 MPHOSPH9Q99550 1183 aa19.4■□□□□ 0.7
SRSF1-205ENST00000582730 AKNAQ7Z591 1439 aa19.4■□□□□ 0.7
SRSF1-205ENST00000582730 ABCC5O15440 1437 aa19.39■□□□□ 0.69
SRSF1-205ENST00000582730 PLEKHD1A6NEE1 506 aa19.38■□□□□ 0.69
SRSF1-205ENST00000582730 KIF14Q15058 1648 aa19.35■□□□□ 0.69
SRSF1-205ENST00000582730 DNMT1P26358 1616 aaKnown RBP19.35■□□□□ 0.69
SRSF1-205ENST00000582730 KCNH8Q96L42 1107 aa19.34■□□□□ 0.69
SRSF1-205ENST00000582730 CAMSAP2Q08AD1 1489 aa19.34■□□□□ 0.69
SRSF1-205ENST00000582730 ROCK1Q13464 1354 aa19.33■□□□□ 0.68
SRSF1-205ENST00000582730 GPATCH8Q9UKJ3 1502 aaKnown RBP19.32■□□□□ 0.68
SRSF1-205ENST00000582730 DENND4BO75064 1496 aaPredicted RBP19.32■□□□□ 0.68
SRSF1-205ENST00000582730 SLC4A1APQ9BWU0 796 aaKnown RBP19.32■□□□□ 0.68
SRSF1-205ENST00000582730 PTPRGP23470 1445 aa19.29■□□□□ 0.68
SRSF1-205ENST00000582730 ITSN2Q9NZM3 1697 aa19.29■□□□□ 0.68
SRSF1-205ENST00000582730 ATP10BO94823 1461 aa19.28■□□□□ 0.68
SRSF1-205ENST00000582730 ABCA8O94911 1581 aa19.27■□□□□ 0.68
SRSF1-205ENST00000582730 L3MBTL2Q969R5 705 aa19.26■□□□□ 0.67
SRSF1-205ENST00000582730 ANP32CO43423 234 aa19.25■□□□□ 0.67
SRSF1-205ENST00000582730 SUPT16HQ9Y5B9 1047 aaKnown RBP19.23■□□□□ 0.67
SRSF1-205ENST00000582730 ADCY10Q96PN6 1610 aa19.23■□□□□ 0.67
SRSF1-205ENST00000582730 KDM5BQ9UGL1 1544 aa19.23■□□□□ 0.67
SRSF1-205ENST00000582730 NCOA1Q15788 1441 aa19.22■□□□□ 0.67
SRSF1-205ENST00000582730 CHD1O14646 1710 aa19.22■□□□□ 0.67
SRSF1-205ENST00000582730 ANKRD30AQ9BXX3 1397 aa19.21■□□□□ 0.67
SRSF1-205ENST00000582730 HSPA5P11021 654 aaKnown RBP19.2■□□□□ 0.66
SRSF1-205ENST00000582730 ANKRD30BQ9BXX2 1392 aa19.2■□□□□ 0.66
SRSF1-205ENST00000582730 TSPY4P0CV99 314 aa19.19■□□□□ 0.66
SRSF1-205ENST00000582730 TSPY10P0CW01 314 aa19.19■□□□□ 0.66
SRSF1-205ENST00000582730 HNRNPMP52272 730 aaKnown RBP eCLIP19.18■□□□□ 0.66
SRSF1-205ENST00000582730 EIF4G2P78344 907 aaKnown RBP eCLIP19.18■□□□□ 0.66
SRSF1-205ENST00000582730 ABCC10Q5T3U5 1492 aa19.16■□□□□ 0.66
SRSF1-205ENST00000582730 CDC42BPAQ5VT25 1732 aa19.16■□□□□ 0.66
SRSF1-205ENST00000582730 ADGBQ8N7X0 1667 aa19.16■□□□□ 0.66
SRSF1-205ENST00000582730 PKD2Q13563 968 aa19.15■□□□□ 0.66
SRSF1-205ENST00000582730 ANKRD50Q9ULJ7 1429 aa19.15■□□□□ 0.66
SRSF1-205ENST00000582730 RPRD2Q5VT52 1461 aaKnown RBP19.14■□□□□ 0.66
SRSF1-205ENST00000582730 C9orf84Q5VXU9 1444 aa19.14■□□□□ 0.65
SRSF1-205ENST00000582730 ZNF326Q5BKZ1 582 aaKnown RBP19.14■□□□□ 0.65
SRSF1-205ENST00000582730 PZPP20742 1482 aa19.13■□□□□ 0.65
SRSF1-205ENST00000582730 ADGRL2O95490 1459 aa19.13■□□□□ 0.65
SRSF1-205ENST00000582730 CROCC2H7BZ55 1655 aa19.12■□□□□ 0.65
SRSF1-205ENST00000582730 NBPF8Q3BBV2 869 aa19.12■□□□□ 0.65
SRSF1-205ENST00000582730 NUP155O75694 1391 aa19.1■□□□□ 0.65
SRSF1-205ENST00000582730 WASHC2AQ641Q2 1341 aa19.1■□□□□ 0.65
SRSF1-205ENST00000582730 TSHZ2Q9NRE2 1034 aa19.1■□□□□ 0.65
SRSF1-205ENST00000582730 ERCC6L2Q5T890 1561 aa19.09■□□□□ 0.65
SRSF1-205ENST00000582730 CCER2I3L3R5 266 aa19.08■□□□□ 0.64
SRSF1-205ENST00000582730 KIF15Q9NS87 1388 aa19.08■□□□□ 0.64
SRSF1-205ENST00000582730 KIAA1107Q9UPP5 1409 aa19.07■□□□□ 0.64
SRSF1-205ENST00000582730 TEX14Q8IWB6 1497 aa19.07■□□□□ 0.64
SRSF1-205ENST00000582730 SHANK2Q9UPX8 1470 aa19.04■□□□□ 0.64
SRSF1-205ENST00000582730 ARHGAP5Q13017 1502 aa19.02■□□□□ 0.64
SRSF1-205ENST00000582730 ANP32EQ9BTT0 268 aa19.02■□□□□ 0.64
SRSF1-205ENST00000582730 SHROOM2Q13796 1616 aa19.02■□□□□ 0.63
SRSF1-205ENST00000582730 CCDC141Q6ZP82 1450 aa19.01■□□□□ 0.63
SRSF1-205ENST00000582730 C11orf95C9JLR9 678 aaPredicted RBP19.01■□□□□ 0.63
SRSF1-205ENST00000582730 SAMD9LQ8IVG5 1584 aa19.01■□□□□ 0.63
SRSF1-205ENST00000582730 POLR3GLQ9BT43 218 aa19■□□□□ 0.63
SRSF1-205ENST00000582730 MBD5Q9P267 1494 aa19■□□□□ 0.63
SRSF1-205ENST00000582730 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.99■□□□□ 0.631e-15■■□□□ 13.7
SRSF1-205ENST00000582730 ABCC2Q92887 1545 aa18.99■□□□□ 0.63
SRSF1-205ENST00000582730 PREX2Q70Z35 1606 aa18.99■□□□□ 0.63
SRSF1-205ENST00000582730 CDC42BPBQ9Y5S2 1711 aa18.99■□□□□ 0.63
SRSF1-205ENST00000582730 TTC37Q6PGP7 1564 aa18.98■□□□□ 0.63
SRSF1-205ENST00000582730 SYCP2Q9BX26 1530 aa18.98■□□□□ 0.63
SRSF1-205ENST00000582730 KDM2AQ9Y2K7 1162 aa18.98■□□□□ 0.63
SRSF1-205ENST00000582730 CCDC7Q96M83 1385 aa18.97■□□□□ 0.63
SRSF1-205ENST00000582730 ARHGEF5Q12774 1597 aa18.97■□□□□ 0.63
SRSF1-205ENST00000582730 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.96■□□□□ 0.634e-20■□□□□ 9.3
SRSF1-205ENST00000582730 RSPH4AQ5TD94 716 aa18.96■□□□□ 0.63
SRSF1-205ENST00000582730 CNGB1Q14028 1251 aaPredicted RBP18.95■□□□□ 0.62
SRSF1-205ENST00000582730 CNTLNQ9NXG0 1405 aa18.94■□□□□ 0.62
SRSF1-205ENST00000582730 KIF7Q2M1P5 1343 aa18.92■□□□□ 0.62
SRSF1-205ENST00000582730 HNRNPUQ00839 825 aaKnown RBP eCLIP18.9■□□□□ 0.62
SRSF1-205ENST00000582730 USP47Q96K76 1375 aa18.9■□□□□ 0.62
SRSF1-205ENST00000582730 DCAF11Q8TEB1 546 aa18.9■□□□□ 0.62
SRSF1-205ENST00000582730 BCANQ96GW7 911 aa18.89■□□□□ 0.61
SRSF1-205ENST00000582730 CLASP1Q7Z460 1538 aa18.88■□□□□ 0.61
SRSF1-205ENST00000582730 MYO5CQ9NQX4 1742 aa18.88■□□□□ 0.61
SRSF1-205ENST00000582730 SPATA31E1Q6ZUB1 1445 aa18.88■□□□□ 0.61
SRSF1-205ENST00000582730 EFCAB2Q5VUJ9 269 aa18.87■□□□□ 0.61
SRSF1-205ENST00000582730 CARD11Q9BXL7 1154 aa18.87■□□□□ 0.61
SRSF1-205ENST00000582730 RGL3Q3MIN7 710 aa18.87■□□□□ 0.61
SRSF1-205ENST00000582730 ZCCHC11Q5TAX3 1644 aaKnown RBP18.86■□□□□ 0.61
SRSF1-205ENST00000582730 KDM5DQ9BY66 1539 aa18.86■□□□□ 0.61
SRSF1-205ENST00000582730 FAM135AQ9P2D6 1515 aa18.86■□□□□ 0.61
SRSF1-205ENST00000582730 FKBP8Q14318 412 aa18.86■□□□□ 0.61
SRSF1-205ENST00000582730 CCDC184Q52MB2 194 aa18.85■□□□□ 0.61
SRSF1-205ENST00000582730 PLEKHH2Q8IVE3 1493 aa18.84■□□□□ 0.61
SRSF1-205ENST00000582730 PRKRIP1Q9H875 184 aaPredicted RBP18.84■□□□□ 0.61
SRSF1-205ENST00000582730 NEFLP07196 543 aa18.84■□□□□ 0.61
SRSF1-205ENST00000582730 MRS2Q9HD23 443 aa18.83■□□□□ 0.6
SRSF1-205ENST00000582730 PLCH2O75038 1416 aa18.83■□□□□ 0.6
SRSF1-205ENST00000582730 FAM9BQ8IZU0 186 aa18.83■□□□□ 0.6
SRSF1-205ENST00000582730 CCDC144AA2RUR9 1427 aa18.82■□□□□ 0.6
SRSF1-205ENST00000582730 ARHGEF12Q9NZN5 1544 aa18.82■□□□□ 0.6
SRSF1-205ENST00000582730 BCL11AQ9H165 835 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms