RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 ABCC2Q92887 1545 aa14.21□□□□□ -0.13
TRAPPC8-211ENST00000582539 CDK13Q14004 1512 aaKnown RBP14.2□□□□□ -0.14
TRAPPC8-211ENST00000582539 SLC4A1APQ9BWU0 796 aaKnown RBP14.19□□□□□ -0.14
TRAPPC8-211ENST00000582539 DNMT1P26358 1616 aaKnown RBP14.18□□□□□ -0.14
TRAPPC8-211ENST00000582539 NEUROD1Q13562 356 aa14.18□□□□□ -0.14
TRAPPC8-211ENST00000582539 KIAA1107Q9UPP5 1409 aa14.18□□□□□ -0.14
TRAPPC8-211ENST00000582539 GCC2Q8IWJ2 1684 aa14.18□□□□□ -0.14
TRAPPC8-211ENST00000582539 MYT1LQ9UL68 1186 aa14.17□□□□□ -0.14
TRAPPC8-211ENST00000582539 ADGRL2O95490 1459 aa14.17□□□□□ -0.14
TRAPPC8-211ENST00000582539 CCDC141Q6ZP82 1450 aa14.17□□□□□ -0.14
TRAPPC8-211ENST00000582539 CAMSAP2Q08AD1 1489 aa14.17□□□□□ -0.14
TRAPPC8-211ENST00000582539 NAIPQ13075 1403 aa14.16□□□□□ -0.14
TRAPPC8-211ENST00000582539 ARHGEF5Q12774 1597 aa14.15□□□□□ -0.14
TRAPPC8-211ENST00000582539 RRP7BPQ9NSQ0 103 aa14.15□□□□□ -0.14
TRAPPC8-211ENST00000582539 SHROOM2Q13796 1616 aa14.15□□□□□ -0.14
TRAPPC8-211ENST00000582539 ARAP3Q8WWN8 1544 aa14.15□□□□□ -0.14
TRAPPC8-211ENST00000582539 ADGBQ8N7X0 1667 aa14.15□□□□□ -0.14
TRAPPC8-211ENST00000582539 PLB1Q6P1J6 1458 aa14.14□□□□□ -0.15
TRAPPC8-211ENST00000582539 ANP32CO43423 234 aa14.14□□□□□ -0.15
TRAPPC8-211ENST00000582539 CHD1O14646 1710 aa14.13□□□□□ -0.15
TRAPPC8-211ENST00000582539 ATP10BO94823 1461 aa14.13□□□□□ -0.15
TRAPPC8-211ENST00000582539 CHIC2Q9UKJ5 165 aa14.13□□□□□ -0.15
TRAPPC8-211ENST00000582539 ARHGAP5Q13017 1502 aa14.13□□□□□ -0.15
TRAPPC8-211ENST00000582539 GPATCH8Q9UKJ3 1502 aaKnown RBP14.13□□□□□ -0.15
TRAPPC8-211ENST00000582539 ARID3CA6NKF2 412 aa14.13□□□□□ -0.15
TRAPPC8-211ENST00000582539 EIF4G2P78344 907 aaKnown RBP eCLIP14.12□□□□□ -0.15
TRAPPC8-211ENST00000582539 C9orf84Q5VXU9 1444 aa14.11□□□□□ -0.15
TRAPPC8-211ENST00000582539 MPHOSPH9Q99550 1183 aa14.11□□□□□ -0.15
TRAPPC8-211ENST00000582539 ANKRD50Q9ULJ7 1429 aa14.11□□□□□ -0.15
TRAPPC8-211ENST00000582539 CFAP74Q9C0B2 1584 aa14.1□□□□□ -0.15
TRAPPC8-211ENST00000582539 ABCC5O15440 1437 aa14.09□□□□□ -0.15
TRAPPC8-211ENST00000582539 PPP1R15AO75807 674 aaPredicted RBP14.08□□□□□ -0.15
TRAPPC8-211ENST00000582539 CLASP1Q7Z460 1538 aa14.08□□□□□ -0.16
TRAPPC8-211ENST00000582539 ARID4BQ4LE39 1312 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC8-211ENST00000582539 KIF15Q9NS87 1388 aa14.06□□□□□ -0.16
TRAPPC8-211ENST00000582539 WDR7Q9Y4E6 1490 aa14.05□□□□□ -0.16
TRAPPC8-211ENST00000582539 RTEL1-TNFRSF6BF6WH68 1400 aa14.05□□□□□ -0.16
TRAPPC8-211ENST00000582539 SPAG9O60271 1321 aaKnown RBP14.05□□□□□ -0.16
TRAPPC8-211ENST00000582539 PLCH2O75038 1416 aa14.05□□□□□ -0.16
TRAPPC8-211ENST00000582539 KDM5BQ9UGL1 1544 aa14.04□□□□□ -0.16
TRAPPC8-211ENST00000582539 ROCK2O75116 1388 aaKnown RBP14.04□□□□□ -0.16
TRAPPC8-211ENST00000582539 CDCA8Q53HL2 280 aa14.04□□□□□ -0.16
TRAPPC8-211ENST00000582539 NUP155O75694 1391 aa14.04□□□□□ -0.16
TRAPPC8-211ENST00000582539 NCOA1Q15788 1441 aa14.04□□□□□ -0.16
TRAPPC8-211ENST00000582539 ABCC10Q5T3U5 1492 aa14.03□□□□□ -0.16
TRAPPC8-211ENST00000582539 ERBINQ96RT1 1412 aa14.03□□□□□ -0.16
TRAPPC8-211ENST00000582539 MAST1Q9Y2H9 1570 aa14.03□□□□□ -0.16
TRAPPC8-211ENST00000582539 DUOX2Q9NRD8 1548 aa14.02□□□□□ -0.16
TRAPPC8-211ENST00000582539 KCNH8Q96L42 1107 aa14.02□□□□□ -0.16
TRAPPC8-211ENST00000582539 PREX2Q70Z35 1606 aa14.01□□□□□ -0.17
TRAPPC8-211ENST00000582539 MYO5CQ9NQX4 1742 aa14.01□□□□□ -0.17
TRAPPC8-211ENST00000582539 NEFLP07196 543 aa14.01□□□□□ -0.17
TRAPPC8-211ENST00000582539 CCER2I3L3R5 266 aa14□□□□□ -0.17
TRAPPC8-211ENST00000582539 MAGI3Q5TCQ9 1506 aa13.99□□□□□ -0.17
TRAPPC8-211ENST00000582539 MAPKBP1O60336 1514 aa13.96□□□□□ -0.17
TRAPPC8-211ENST00000582539 CCDC144AA2RUR9 1427 aa13.96□□□□□ -0.17
TRAPPC8-211ENST00000582539 PKD2Q13563 968 aa13.96□□□□□ -0.17
TRAPPC8-211ENST00000582539 KDM5DQ9BY66 1539 aa13.95□□□□□ -0.18
TRAPPC8-211ENST00000582539 CROCC2H7BZ55 1655 aa13.95□□□□□ -0.18
TRAPPC8-211ENST00000582539 ARHGEF12Q9NZN5 1544 aa13.95□□□□□ -0.18
TRAPPC8-211ENST00000582539 TEX14Q8IWB6 1497 aa13.94□□□□□ -0.18
TRAPPC8-211ENST00000582539 RPRD2Q5VT52 1461 aaKnown RBP13.94□□□□□ -0.18
TRAPPC8-211ENST00000582539 PLXNC1O60486 1568 aa13.94□□□□□ -0.18
TRAPPC8-211ENST00000582539 EIF3AQ14152 1382 aaKnown RBP13.93□□□□□ -0.18
TRAPPC8-211ENST00000582539 HNRNPMP52272 730 aaKnown RBP eCLIP13.92□□□□□ -0.183e-6■■■■□ 19.4
TRAPPC8-211ENST00000582539 LRRIQ1Q96JM4 1722 aa13.92□□□□□ -0.18
TRAPPC8-211ENST00000582539 ANKRD30BQ9BXX2 1392 aa13.91□□□□□ -0.18
TRAPPC8-211ENST00000582539 KTN1Q86UP2 1357 aaKnown RBP13.91□□□□□ -0.18
TRAPPC8-211ENST00000582539 SIN3AQ96ST3 1273 aa13.9□□□□□ -0.18
TRAPPC8-211ENST00000582539 ZCCHC11Q5TAX3 1644 aaKnown RBP13.9□□□□□ -0.18
TRAPPC8-211ENST00000582539 PPP6R1Q9UPN7 881 aa13.9□□□□□ -0.18
TRAPPC8-211ENST00000582539 NEO1Q92859 1461 aa13.9□□□□□ -0.18
TRAPPC8-211ENST00000582539 CDC42BPAQ5VT25 1732 aa13.89□□□□□ -0.19
TRAPPC8-211ENST00000582539 ESF1Q9H501 851 aaKnown RBP13.88□□□□□ -0.19
TRAPPC8-211ENST00000582539 ZNF518AQ6AHZ1 1483 aa13.88□□□□□ -0.19
TRAPPC8-211ENST00000582539 PTPRKQ15262 1439 aa13.88□□□□□ -0.19
TRAPPC8-211ENST00000582539 FANCAO15360 1455 aa13.88□□□□□ -0.19
TRAPPC8-211ENST00000582539 ADGRL1O94910 1474 aa13.87□□□□□ -0.19
TRAPPC8-211ENST00000582539 EIF2AK4Q9P2K8 1649 aaKnown RBP13.87□□□□□ -0.19
TRAPPC8-211ENST00000582539 SCAPERQ9BY12 1400 aa13.87□□□□□ -0.19
TRAPPC8-211ENST00000582539 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.86□□□□□ -0.195e-7■■■■□ 21.6
TRAPPC8-211ENST00000582539 HDGFP51858 240 aaKnown RBP13.85□□□□□ -0.19
TRAPPC8-211ENST00000582539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.85□□□□□ -0.193e-6■□□□□ 9.2
TRAPPC8-211ENST00000582539 ASXL2Q76L83 1435 aa13.85□□□□□ -0.19
TRAPPC8-211ENST00000582539 SYCP2Q9BX26 1530 aa13.85□□□□□ -0.19
TRAPPC8-211ENST00000582539 ZNF644Q9H582 1327 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC8-211ENST00000582539 CD109Q6YHK3 1445 aa13.84□□□□□ -0.19
TRAPPC8-211ENST00000582539 ABCC1P33527 1531 aa13.84□□□□□ -0.19
TRAPPC8-211ENST00000582539 L3MBTL2Q969R5 705 aa13.83□□□□□ -0.19
TRAPPC8-211ENST00000582539 CARD11Q9BXL7 1154 aa13.83□□□□□ -0.2
TRAPPC8-211ENST00000582539 MBD5Q9P267 1494 aa13.82□□□□□ -0.2
TRAPPC8-211ENST00000582539 ABCA9Q8IUA7 1624 aa13.82□□□□□ -0.2
TRAPPC8-211ENST00000582539 SAMD9LQ8IVG5 1584 aa13.82□□□□□ -0.2
TRAPPC8-211ENST00000582539 RPGRIP1LQ68CZ1 1315 aa13.81□□□□□ -0.2
TRAPPC8-211ENST00000582539 DENND4BO75064 1496 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC8-211ENST00000582539 DHX29Q7Z478 1369 aaKnown RBP13.81□□□□□ -0.2
TRAPPC8-211ENST00000582539 FAM135AQ9P2D6 1515 aa13.81□□□□□ -0.2
TRAPPC8-211ENST00000582539 ZNF326Q5BKZ1 582 aaKnown RBP13.8□□□□□ -0.2
TRAPPC8-211ENST00000582539 UNC13BO14795 1591 aa13.79□□□□□ -0.2
TRAPPC8-211ENST00000582539 TMF1P82094 1093 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms