RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 CCDC7Q96M83 1385 aa18.9■□□□□ 0.62
RNF43-205ENST00000581868 SLC4A1APQ9BWU0 796 aaKnown RBP18.89■□□□□ 0.62
RNF43-205ENST00000581868 MRS2Q9HD23 443 aa18.89■□□□□ 0.61
RNF43-205ENST00000581868 PBRM1Q86U86 1689 aa18.89■□□□□ 0.61
RNF43-205ENST00000581868 WDR62O43379 1518 aa18.89■□□□□ 0.61
RNF43-205ENST00000581868 ANKRD30BQ9BXX2 1392 aa18.88■□□□□ 0.61
RNF43-205ENST00000581868 DAPK1P53355 1430 aa18.87■□□□□ 0.61
RNF43-205ENST00000581868 NCOA1Q15788 1441 aa18.87■□□□□ 0.61
RNF43-205ENST00000581868 CDK11AQ9UQ88 783 aaPredicted RBP18.87■□□□□ 0.61
RNF43-205ENST00000581868 ADAMTS12P58397 1594 aa18.85■□□□□ 0.61
RNF43-205ENST00000581868 ABCC5O15440 1437 aa18.84■□□□□ 0.61
RNF43-205ENST00000581868 CNGB1Q14028 1251 aaPredicted RBP18.84■□□□□ 0.61
RNF43-205ENST00000581868 RPRD2Q5VT52 1461 aaKnown RBP18.83■□□□□ 0.61
RNF43-205ENST00000581868 ROCK1Q13464 1354 aa18.83■□□□□ 0.6
RNF43-205ENST00000581868 KIF7Q2M1P5 1343 aa18.82■□□□□ 0.6
RNF43-205ENST00000581868 POLR3GLQ9BT43 218 aa18.8■□□□□ 0.6
RNF43-205ENST00000581868 TEX14Q8IWB6 1497 aa18.79■□□□□ 0.6
RNF43-205ENST00000581868 MSH5O43196 834 aa18.79■□□□□ 0.6
RNF43-205ENST00000581868 ZNF326Q5BKZ1 582 aaKnown RBP18.79■□□□□ 0.6
RNF43-205ENST00000581868 PPP4R2Q9NY27 417 aa18.79■□□□□ 0.6
RNF43-205ENST00000581868 ZNF777Q9ULD5 760 aaPredicted RBP18.78■□□□□ 0.6
RNF43-205ENST00000581868 ZNF608Q9ULD9 1512 aaPredicted RBP18.77■□□□□ 0.6
RNF43-205ENST00000581868 DNMT1P26358 1616 aaKnown RBP18.77■□□□□ 0.6
RNF43-205ENST00000581868 NUP153P49790 1475 aaKnown RBP18.76■□□□□ 0.59
RNF43-205ENST00000581868 CFDP1Q9UEE9 299 aaPredicted RBP18.76■□□□□ 0.59
RNF43-205ENST00000581868 ZBED9Q6R2W3 1325 aa18.76■□□□□ 0.59
RNF43-205ENST00000581868 ERICH6BQ5W0A0 696 aa18.75■□□□□ 0.59
RNF43-205ENST00000581868 DISP1Q96F81 1524 aa18.75■□□□□ 0.59
RNF43-205ENST00000581868 SPATA31E1Q6ZUB1 1445 aa18.75■□□□□ 0.59
RNF43-205ENST00000581868 MRC2Q9UBG0 1479 aa18.75■□□□□ 0.59
RNF43-205ENST00000581868 B4GALNT3Q6L9W6 998 aa18.74■□□□□ 0.59
RNF43-205ENST00000581868 KIAA0586Q9BVV6 1533 aa18.73■□□□□ 0.59
RNF43-205ENST00000581868 PRG4Q92954 1404 aaPredicted RBP18.73■□□□□ 0.59
RNF43-205ENST00000581868 KIAA0556O60303 1618 aa18.73■□□□□ 0.59
RNF43-205ENST00000581868 PZPP20742 1482 aa18.7■□□□□ 0.58
RNF43-205ENST00000581868 FANCIQ9NVI1 1328 aa18.7■□□□□ 0.58
RNF43-205ENST00000581868 RAPGEF6Q8TEU7 1601 aa18.7■□□□□ 0.58
RNF43-205ENST00000581868 PKD2Q13563 968 aa18.7■□□□□ 0.58
RNF43-205ENST00000581868 SENP3-EIF4A1A0A087X0R7 540 aa18.68■□□□□ 0.58
RNF43-205ENST00000581868 CAMSAP2Q08AD1 1489 aa18.68■□□□□ 0.58
RNF43-205ENST00000581868 IFT140Q96RY7 1462 aa18.67■□□□□ 0.58
RNF43-205ENST00000581868 ERICH6Q7L0X2 663 aa18.67■□□□□ 0.58
RNF43-205ENST00000581868 USP47Q96K76 1375 aa18.66■□□□□ 0.58
RNF43-205ENST00000581868 TROQ12816 1431 aaPredicted RBP18.66■□□□□ 0.58
RNF43-205ENST00000581868 FBLN2P98095 1184 aa18.65■□□□□ 0.58
RNF43-205ENST00000581868 KIAA1107Q9UPP5 1409 aa18.64■□□□□ 0.57
RNF43-205ENST00000581868 GRIN2AQ12879 1464 aa18.64■□□□□ 0.57
RNF43-205ENST00000581868 PLB1Q6P1J6 1458 aa18.64■□□□□ 0.57
RNF43-205ENST00000581868 DHX29Q7Z478 1369 aaKnown RBP18.63■□□□□ 0.57
RNF43-205ENST00000581868 GPATCH8Q9UKJ3 1502 aaKnown RBP18.63■□□□□ 0.57
RNF43-205ENST00000581868 CHMP7Q8WUX9 453 aaPredicted RBP18.63■□□□□ 0.57
RNF43-205ENST00000581868 ANKRD30AQ9BXX3 1397 aa18.61■□□□□ 0.57
RNF43-205ENST00000581868 POLR1AO95602 1720 aaPredicted RBP18.6■□□□□ 0.57
RNF43-205ENST00000581868 MBD5Q9P267 1494 aa18.59■□□□□ 0.57
RNF43-205ENST00000581868 KDM2AQ9Y2K7 1162 aa18.59■□□□□ 0.57
RNF43-205ENST00000581868 KIF14Q15058 1648 aa18.58■□□□□ 0.57
RNF43-205ENST00000581868 BCORL1Q5H9F3 1711 aa18.58■□□□□ 0.57
RNF43-205ENST00000581868 ANKRD50Q9ULJ7 1429 aa18.57■□□□□ 0.56
RNF43-205ENST00000581868 CARD11Q9BXL7 1154 aa18.57■□□□□ 0.56
RNF43-205ENST00000581868 NUP155O75694 1391 aa18.57■□□□□ 0.56
RNF43-205ENST00000581868 NUDCQ9Y266 331 aa18.56■□□□□ 0.56
RNF43-205ENST00000581868 SMG6Q86US8 1419 aaKnown RBP18.56■□□□□ 0.56
RNF43-205ENST00000581868 TMC1Q8TDI8 760 aa18.56■□□□□ 0.56
RNF43-205ENST00000581868 ADGBQ8N7X0 1667 aa18.55■□□□□ 0.56
RNF43-205ENST00000581868 ITSN2Q9NZM3 1697 aa18.55■□□□□ 0.56
RNF43-205ENST00000581868 ADGRL2O95490 1459 aa18.55■□□□□ 0.56
RNF43-205ENST00000581868 EIF4G3O43432 1585 aaKnown RBP18.54■□□□□ 0.56
RNF43-205ENST00000581868 PLEKHD1A6NEE1 506 aa18.54■□□□□ 0.56
RNF43-205ENST00000581868 BCL11AQ9H165 835 aa18.54■□□□□ 0.56
RNF43-205ENST00000581868 JPH4Q96JJ6 628 aa18.53■□□□□ 0.56
RNF43-205ENST00000581868 PNISRQ8TF01 805 aaKnown RBP18.53■□□□□ 0.56
RNF43-205ENST00000581868 ARID4BQ4LE39 1312 aaPredicted RBP18.52■□□□□ 0.55
RNF43-205ENST00000581868 KDM5CP41229 1560 aa18.52■□□□□ 0.55
RNF43-205ENST00000581868 ST20-MTHFSA0A0A6YYL1 179 aa18.52■□□□□ 0.55
RNF43-205ENST00000581868 TSPY4P0CV99 314 aa18.51■□□□□ 0.55
RNF43-205ENST00000581868 TSPY10P0CW01 314 aa18.51■□□□□ 0.55
RNF43-205ENST00000581868 DCAF11Q8TEB1 546 aa18.51■□□□□ 0.55
RNF43-205ENST00000581868 CCDC136Q96JN2 1154 aa18.51■□□□□ 0.55
RNF43-205ENST00000581868 CARMIL2Q6F5E8 1435 aa18.5■□□□□ 0.55
RNF43-205ENST00000581868 CEP170Q5SW79 1584 aa18.5■□□□□ 0.55
RNF43-205ENST00000581868 HNRNPMP52272 730 aaKnown RBP eCLIP18.49■□□□□ 0.552e-6■■■□□ 19.1
RNF43-205ENST00000581868 CROCC2H7BZ55 1655 aa18.49■□□□□ 0.55
RNF43-205ENST00000581868 C9orf84Q5VXU9 1444 aa18.48■□□□□ 0.55
RNF43-205ENST00000581868 ROCK2O75116 1388 aaKnown RBP18.48■□□□□ 0.55
RNF43-205ENST00000581868 UHRF1BP1Q6BDS2 1440 aa18.47■□□□□ 0.55
RNF43-205ENST00000581868 RALGAPBQ86X10 1494 aa18.47■□□□□ 0.55
RNF43-205ENST00000581868 ADCY10Q96PN6 1610 aa18.47■□□□□ 0.55
RNF43-205ENST00000581868 MAGI1Q96QZ7 1491 aaPredicted RBP18.46■□□□□ 0.55
RNF43-205ENST00000581868 SYNJ2O15056 1496 aa18.45■□□□□ 0.54
RNF43-205ENST00000581868 KIF15Q9NS87 1388 aa18.45■□□□□ 0.54
RNF43-205ENST00000581868 RNF123Q5XPI4 1314 aa18.45■□□□□ 0.54
RNF43-205ENST00000581868 SALL2Q9Y467 1007 aaPredicted RBP18.43■□□□□ 0.54
RNF43-205ENST00000581868 ERCC6Q03468 1493 aa18.42■□□□□ 0.54
RNF43-205ENST00000581868 ATP10BO94823 1461 aa18.41■□□□□ 0.54
RNF43-205ENST00000581868 MYBBP1AQ9BQG0 1328 aaKnown RBP18.41■□□□□ 0.54
RNF43-205ENST00000581868 CDC42BPAQ5VT25 1732 aa18.41■□□□□ 0.54
RNF43-205ENST00000581868 ABCC10Q5T3U5 1492 aa18.4■□□□□ 0.54
RNF43-205ENST00000581868 RALBP1Q15311 655 aa18.39■□□□□ 0.54
RNF43-205ENST00000581868 RGL3Q3MIN7 710 aa18.39■□□□□ 0.54
RNF43-205ENST00000581868 ARHGEF12Q9NZN5 1544 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms