RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 KIF13AQ9H1H9 1805 aa16.28■□□□□ 0.2
CCDC47-203ENST00000580986 SUPT6HQ7KZ85 1726 aaKnown RBP16.28■□□□□ 0.2
CCDC47-203ENST00000580986 MAP3K4Q9Y6R4 1608 aa16.27■□□□□ 0.19
CCDC47-203ENST00000580986 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.26■□□□□ 0.192e-9■■■■□ 23.9
CCDC47-203ENST00000580986 ARAP3Q8WWN8 1544 aa16.25■□□□□ 0.19
CCDC47-203ENST00000580986 TTC37Q6PGP7 1564 aa16.23■□□□□ 0.19
CCDC47-203ENST00000580986 KANK4Q5T7N3 995 aaPredicted RBP16.21■□□□□ 0.19
CCDC47-203ENST00000580986 MYO5CQ9NQX4 1742 aa16.21■□□□□ 0.19
CCDC47-203ENST00000580986 NCOA2Q15596 1464 aa16.21■□□□□ 0.19
CCDC47-203ENST00000580986 ITSN2Q9NZM3 1697 aa16.21■□□□□ 0.18
CCDC47-203ENST00000580986 PREX2Q70Z35 1606 aa16.19■□□□□ 0.18
CCDC47-203ENST00000580986 CDC42BPAQ5VT25 1732 aa16.19■□□□□ 0.18
CCDC47-203ENST00000580986 FAM69CQ0P6D2 419 aa16.18■□□□□ 0.18
CCDC47-203ENST00000580986 KCNH8Q96L42 1107 aa16.18■□□□□ 0.18
CCDC47-203ENST00000580986 PLCH2O75038 1416 aa16.18■□□□□ 0.18
CCDC47-203ENST00000580986 CD109Q6YHK3 1445 aa16.18■□□□□ 0.18
CCDC47-203ENST00000580986 CFAP74Q9C0B2 1584 aa16.17■□□□□ 0.18
CCDC47-203ENST00000580986 PPRC1Q5VV67 1664 aaKnown RBP16.16■□□□□ 0.18
CCDC47-203ENST00000580986 TEX14Q8IWB6 1497 aa16.16■□□□□ 0.18
CCDC47-203ENST00000580986 GPATCH8Q9UKJ3 1502 aaKnown RBP16.15■□□□□ 0.18
CCDC47-203ENST00000580986 CDC42BPBQ9Y5S2 1711 aa16.14■□□□□ 0.17
CCDC47-203ENST00000580986 PHLDB1Q86UU1 1377 aa16.13■□□□□ 0.17
CCDC47-203ENST00000580986 CCNB3Q8WWL7 1395 aa16.13■□□□□ 0.17
CCDC47-203ENST00000580986 MYOM3Q5VTT5 1437 aa16.13■□□□□ 0.17
CCDC47-203ENST00000580986 MIA2Q96PC5 1412 aa16.13■□□□□ 0.17
CCDC47-203ENST00000580986 NEO1Q92859 1461 aa16.13■□□□□ 0.17
CCDC47-203ENST00000580986 FANCAO15360 1455 aa16.1■□□□□ 0.17
CCDC47-203ENST00000580986 ARHGAP5Q13017 1502 aa16.09■□□□□ 0.17
CCDC47-203ENST00000580986 TRHP20396 242 aaPredicted RBP16.09■□□□□ 0.17
CCDC47-203ENST00000580986 PLEKHH2Q8IVE3 1493 aa16.08■□□□□ 0.16
CCDC47-203ENST00000580986 EFCAB2Q5VUJ9 269 aa16.07■□□□□ 0.16
CCDC47-203ENST00000580986 FGD6Q6ZV73 1430 aa16.07■□□□□ 0.16
CCDC47-203ENST00000580986 TSPOAP1O95153 1857 aa16.07■□□□□ 0.16
CCDC47-203ENST00000580986 SAMD9LQ8IVG5 1584 aa16.05■□□□□ 0.16
CCDC47-203ENST00000580986 ABCC1P33527 1531 aa16.05■□□□□ 0.16
CCDC47-203ENST00000580986 TCOF1Q13428 1488 aaKnown RBP16.05■□□□□ 0.16
CCDC47-203ENST00000580986 KIAA1107Q9UPP5 1409 aa16.05■□□□□ 0.16
CCDC47-203ENST00000580986 CFDP1Q9UEE9 299 aaPredicted RBP16.05■□□□□ 0.16
CCDC47-203ENST00000580986 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.04■□□□□ 0.16
CCDC47-203ENST00000580986 AKNAQ7Z591 1439 aa16.03■□□□□ 0.16
CCDC47-203ENST00000580986 RRBP1Q9P2E9 1410 aaKnown RBP16.03■□□□□ 0.16
CCDC47-203ENST00000580986 PTPN23Q9H3S7 1636 aa16.03■□□□□ 0.16
CCDC47-203ENST00000580986 U3KPZ7 1027 aaPredicted RBP16.02■□□□□ 0.16
CCDC47-203ENST00000580986 CAMSAP2Q08AD1 1489 aa16.02■□□□□ 0.15
CCDC47-203ENST00000580986 ADGRL1O94910 1474 aa16.01■□□□□ 0.15
CCDC47-203ENST00000580986 ARHGEF5Q12774 1597 aa16■□□□□ 0.15
CCDC47-203ENST00000580986 MBD5Q9P267 1494 aa15.98■□□□□ 0.15
CCDC47-203ENST00000580986 RICTORQ6R327 1708 aa15.98■□□□□ 0.15
CCDC47-203ENST00000580986 SYCP2Q9BX26 1530 aa15.98■□□□□ 0.15
CCDC47-203ENST00000580986 ZNF518AQ6AHZ1 1483 aa15.97■□□□□ 0.15
CCDC47-203ENST00000580986 KDM5CP41229 1560 aa15.97■□□□□ 0.15
CCDC47-203ENST00000580986 POGZQ7Z3K3 1410 aa15.97■□□□□ 0.15
CCDC47-203ENST00000580986 RSPH4AQ5TD94 716 aa15.97■□□□□ 0.15
CCDC47-203ENST00000580986 DENND4BO75064 1496 aaPredicted RBP15.97■□□□□ 0.15
CCDC47-203ENST00000580986 SCAPERQ9BY12 1400 aa15.96■□□□□ 0.15
CCDC47-203ENST00000580986 ZMYM4Q5VZL5 1548 aa15.96■□□□□ 0.15
CCDC47-203ENST00000580986 PPARGC1BQ86YN6 1023 aaKnown RBP15.96■□□□□ 0.15
CCDC47-203ENST00000580986 KDM6BO15054 1643 aa15.96■□□□□ 0.15
CCDC47-203ENST00000580986 DNMT1P26358 1616 aaKnown RBP15.96■□□□□ 0.15
CCDC47-203ENST00000580986 ARHGEF12Q9NZN5 1544 aa15.95■□□□□ 0.14
CCDC47-203ENST00000580986 CCDC141Q6ZP82 1450 aa15.95■□□□□ 0.14
CCDC47-203ENST00000580986 FRMPD1Q5SYB0 1578 aa15.95■□□□□ 0.14
CCDC47-203ENST00000580986 CROCC2H7BZ55 1655 aa15.93■□□□□ 0.14
CCDC47-203ENST00000580986 SHANK2Q9UPX8 1470 aa15.93■□□□□ 0.14
CCDC47-203ENST00000580986 KCNA4P22459 653 aa15.93■□□□□ 0.14
CCDC47-203ENST00000580986 ZNF644Q9H582 1327 aaPredicted RBP15.93■□□□□ 0.14
CCDC47-203ENST00000580986 MAST1Q9Y2H9 1570 aa15.92■□□□□ 0.14
CCDC47-203ENST00000580986 MAGI2Q86UL8 1455 aa15.92■□□□□ 0.14
CCDC47-203ENST00000580986 COL17A1Q9UMD9 1497 aaPredicted RBP15.92■□□□□ 0.14
CCDC47-203ENST00000580986 ZNF777Q9ULD5 760 aaPredicted RBP15.91■□□□□ 0.14
CCDC47-203ENST00000580986 MLH3Q9UHC1 1453 aa15.91■□□□□ 0.14
CCDC47-203ENST00000580986 CAPN15O75808 1086 aa15.9■□□□□ 0.14
CCDC47-203ENST00000580986 RTEL1-TNFRSF6BF6WH68 1400 aa15.9■□□□□ 0.14
CCDC47-203ENST00000580986 TRAPPC8Q9Y2L5 1435 aa15.9■□□□□ 0.14
CCDC47-203ENST00000580986 INO80Q9ULG1 1556 aaPredicted RBP15.9■□□□□ 0.14
CCDC47-203ENST00000580986 HECW2Q9P2P5 1572 aa15.89■□□□□ 0.13
CCDC47-203ENST00000580986 DAPK1P53355 1430 aa15.89■□□□□ 0.13
CCDC47-203ENST00000580986 ABCC5O15440 1437 aa15.88■□□□□ 0.13
CCDC47-203ENST00000580986 ZFYVE16Q7Z3T8 1539 aa15.88■□□□□ 0.13
CCDC47-203ENST00000580986 HNRNPMP52272 730 aaKnown RBP eCLIP15.87■□□□□ 0.13
CCDC47-203ENST00000580986 ADGRL2O95490 1459 aa15.86■□□□□ 0.13
CCDC47-203ENST00000580986 SPINK5Q9NQ38 1064 aaPredicted RBP15.86■□□□□ 0.13
CCDC47-203ENST00000580986 PLXNC1O60486 1568 aa15.86■□□□□ 0.13
CCDC47-203ENST00000580986 KIDINS220Q9ULH0 1771 aa15.85■□□□□ 0.13
CCDC47-203ENST00000580986 ATP7AQ04656 1500 aa15.85■□□□□ 0.13
CCDC47-203ENST00000580986 FAM50AQ14320 339 aaKnown RBP15.85■□□□□ 0.13
CCDC47-203ENST00000580986 ADGBQ8N7X0 1667 aa15.85■□□□□ 0.13
CCDC47-203ENST00000580986 ARHGEF40Q8TER5 1519 aa15.84■□□□□ 0.13
CCDC47-203ENST00000580986 RAPGEF3O95398 923 aa15.84■□□□□ 0.13
CCDC47-203ENST00000580986 C9orf84Q5VXU9 1444 aa15.84■□□□□ 0.13
CCDC47-203ENST00000580986 REREQ9P2R6 1566 aa15.83■□□□□ 0.13
CCDC47-203ENST00000580986 TSPY4P0CV99 314 aa15.83■□□□□ 0.12
CCDC47-203ENST00000580986 TSPY10P0CW01 314 aa15.83■□□□□ 0.12
CCDC47-203ENST00000580986 AFAP1Q8N556 730 aa15.83■□□□□ 0.12
CCDC47-203ENST00000580986 ROCK1Q13464 1354 aa15.83■□□□□ 0.12
CCDC47-203ENST00000580986 SPAG9O60271 1321 aaKnown RBP15.82■□□□□ 0.12
CCDC47-203ENST00000580986 DIP2CQ9Y2E4 1556 aa15.8■□□□□ 0.12
CCDC47-203ENST00000580986 DSG3P32926 999 aa15.8■□□□□ 0.12
CCDC47-203ENST00000580986 ABCA6Q8N139 1617 aa15.79■□□□□ 0.12
CCDC47-203ENST00000580986 PTPRKQ15262 1439 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms