RNA–Protein interactions for RNA: ENST00000580219.5

SNX11-206, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-206ENST00000580219 CEP162Q5TB80 1403 aa15.5■□□□□ 0.07
SNX11-206ENST00000580219 SIGLEC1Q9BZZ2 1709 aa15.49■□□□□ 0.07
SNX11-206ENST00000580219 RAPGEF2Q9Y4G8 1499 aa15.49■□□□□ 0.07
SNX11-206ENST00000580219 EHMT2Q96KQ7 1210 aa15.48■□□□□ 0.07
SNX11-206ENST00000580219 UBTFP17480 764 aaKnown RBP15.47■□□□□ 0.07
SNX11-206ENST00000580219 POGZQ7Z3K3 1410 aa15.46■□□□□ 0.07
SNX11-206ENST00000580219 SLC4A2P04920 1241 aa15.46■□□□□ 0.07
SNX11-206ENST00000580219 HSPA1LP34931 641 aa15.46■□□□□ 0.07
SNX11-206ENST00000580219 FANCAO15360 1455 aa15.46■□□□□ 0.06
SNX11-206ENST00000580219 IQGAP2Q13576 1575 aa15.45■□□□□ 0.06
SNX11-206ENST00000580219 DISP1Q96F81 1524 aa15.45■□□□□ 0.06
SNX11-206ENST00000580219 SLC4A1APQ9BWU0 796 aaKnown RBP15.44■□□□□ 0.06
SNX11-206ENST00000580219 PHLDB1Q86UU1 1377 aa15.42■□□□□ 0.06
SNX11-206ENST00000580219 UHRF1BP1Q6BDS2 1440 aa15.42■□□□□ 0.06
SNX11-206ENST00000580219 SETD1BQ9UPS6 1966 aaKnown RBP15.4■□□□□ 0.06
SNX11-206ENST00000580219 CACNB1Q02641 598 aaPredicted RBP15.38■□□□□ 0.05
SNX11-206ENST00000580219 C1QBPQ07021 282 aaKnown RBP15.38■□□□□ 0.05
SNX11-206ENST00000580219 MLECQ14165 292 aa15.38■□□□□ 0.05
SNX11-206ENST00000580219 RICTORQ6R327 1708 aa15.37■□□□□ 0.05
SNX11-206ENST00000580219 CTTNBP2Q8WZ74 1663 aa15.36■□□□□ 0.05
SNX11-206ENST00000580219 NEO1Q92859 1461 aa15.36■□□□□ 0.05
SNX11-206ENST00000580219 ABCA9Q8IUA7 1624 aa15.35■□□□□ 0.05
SNX11-206ENST00000580219 CLIP1P30622 1438 aa15.35■□□□□ 0.05
SNX11-206ENST00000580219 TRIM26Q12899 539 aaPredicted RBP15.35■□□□□ 0.05
SNX11-206ENST00000580219 KIAA0556O60303 1618 aa15.35■□□□□ 0.05
SNX11-206ENST00000580219 CEBPAP49715 358 aaPredicted RBP15.34■□□□□ 0.05
SNX11-206ENST00000580219 AKNAQ7Z591 1439 aa15.33■□□□□ 0.04
SNX11-206ENST00000580219 PIP4K2BP78356 416 aa15.32■□□□□ 0.04
SNX11-206ENST00000580219 U3KPZ7 1027 aaPredicted RBP15.32■□□□□ 0.04
SNX11-206ENST00000580219 ZNF335Q9H4Z2 1342 aaPredicted RBP15.32■□□□□ 0.04
SNX11-206ENST00000580219 ARHGEF12Q9NZN5 1544 aa15.32■□□□□ 0.04
SNX11-206ENST00000580219 SETD1AO15047 1707 aaKnown RBP15.31■□□□□ 0.04
SNX11-206ENST00000580219 NCOA1Q15788 1441 aa15.29■□□□□ 0.04
SNX11-206ENST00000580219 ZFYVE16Q7Z3T8 1539 aa15.28■□□□□ 0.04
SNX11-206ENST00000580219 PCGF6Q9BYE7 350 aa15.28■□□□□ 0.04
SNX11-206ENST00000580219 VPS8Q8N3P4 1428 aa15.27■□□□□ 0.04
SNX11-206ENST00000580219 RGS17Q9UGC6 210 aaPredicted RBP15.27■□□□□ 0.04
SNX11-206ENST00000580219 EFCAB5A4FU69 1503 aa15.27■□□□□ 0.03
SNX11-206ENST00000580219 UGGT2Q9NYU1 1516 aa15.27■□□□□ 0.03
SNX11-206ENST00000580219 ABCA8O94911 1581 aa15.26■□□□□ 0.03
SNX11-206ENST00000580219 ZMYM4Q5VZL5 1548 aa15.25■□□□□ 0.03
SNX11-206ENST00000580219 DENND4BO75064 1496 aaPredicted RBP15.25■□□□□ 0.03
SNX11-206ENST00000580219 C3P01024 1663 aa15.22■□□□□ 0.03
SNX11-206ENST00000580219 CAMSAP1Q5T5Y3 1602 aa15.21■□□□□ 0.03
SNX11-206ENST00000580219 FHOD3Q2V2M9 1422 aa15.21■□□□□ 0.03
SNX11-206ENST00000580219 TOM1O60784 492 aa15.19■□□□□ 0.02
SNX11-206ENST00000580219 SAMD9Q5K651 1589 aa15.18■□□□□ 0.02
SNX11-206ENST00000580219 ARHGAP35Q9NRY4 1499 aa15.16■□□□□ 0.02
SNX11-206ENST00000580219 HECW1Q76N89 1606 aa15.15■□□□□ 0.02
SNX11-206ENST00000580219 RANGAP1P46060 587 aaPredicted RBP15.15■□□□□ 0.02
SNX11-206ENST00000580219 MAGI2Q86UL8 1455 aa15.14■□□□□ 0.01
SNX11-206ENST00000580219 POTEAQ6S8J7 498 aa15.14■□□□□ 0.01
SNX11-206ENST00000580219 CFAP74Q9C0B2 1584 aa15.14■□□□□ 0.01
SNX11-206ENST00000580219 ARID3CA6NKF2 412 aa15.13■□□□□ 0.01
SNX11-206ENST00000580219 SUPT6HQ7KZ85 1726 aaKnown RBP15.12■□□□□ 0.01
SNX11-206ENST00000580219 NCKAP5LQ9HCH0 1330 aa15.12■□□□□ 0.01
SNX11-206ENST00000580219 ALKQ9UM73 1620 aa15.11■□□□□ 0.01
SNX11-206ENST00000580219 C9orf84Q5VXU9 1444 aa15.09■□□□□ 0.01
SNX11-206ENST00000580219 TRAPPC8Q9Y2L5 1435 aa15.09■□□□□ 0.01
SNX11-206ENST00000580219 ATP10BO94823 1461 aa15.08■□□□□ 0.01
SNX11-206ENST00000580219 APLP2Q06481 763 aa15.08■□□□□ 0
SNX11-206ENST00000580219 P3H3Q8IVL6 736 aa15.08■□□□□ 0
SNX11-206ENST00000580219 ATP10AO60312 1499 aa15.08■□□□□ 0
SNX11-206ENST00000580219 UPF1Q92900 1129 aaKnown RBP eCLIP15.05■□□□□ -0
SNX11-206ENST00000580219 FOXD4L1Q9NU39 408 aa15.05■□□□□ -0
SNX11-206ENST00000580219 CPS1P31327 1500 aa15.05■□□□□ -0
SNX11-206ENST00000580219 MAP3K1Q13233 1512 aa15.05■□□□□ -0
SNX11-206ENST00000580219 PTPRKQ15262 1439 aa15.04■□□□□ -0
SNX11-206ENST00000580219 ZBTB22O15209 634 aa15.04■□□□□ -0
SNX11-206ENST00000580219 HRCP23327 699 aa15.03■□□□□ -0
SNX11-206ENST00000580219 PPARGC1BQ86YN6 1023 aaKnown RBP15.02■□□□□ -0
SNX11-206ENST00000580219 ZNF142P52746 1687 aaPredicted RBP15.01□□□□□ -0.01
SNX11-206ENST00000580219 PLA2R1Q13018 1463 aa15.01□□□□□ -0.01
SNX11-206ENST00000580219 TCOF1Q13428 1488 aaKnown RBP15.01□□□□□ -0.01
SNX11-206ENST00000580219 PKD2Q13563 968 aa15□□□□□ -0.01
SNX11-206ENST00000580219 SPINK5Q9NQ38 1064 aaPredicted RBP15□□□□□ -0.01
SNX11-206ENST00000580219 FMN1Q68DA7 1419 aa15□□□□□ -0.01
SNX11-206ENST00000580219 MYCNP04198 464 aaPredicted RBP14.98□□□□□ -0.01
SNX11-206ENST00000580219 FYCO1Q9BQS8 1478 aa14.96□□□□□ -0.01
SNX11-206ENST00000580219 MYO3AQ8NEV4 1616 aa14.96□□□□□ -0.01
SNX11-206ENST00000580219 RAPGEF6Q8TEU7 1601 aa14.96□□□□□ -0.01
SNX11-206ENST00000580219 SHANK2Q9UPX8 1470 aa14.95□□□□□ -0.02
SNX11-206ENST00000580219 CASKIN1Q8WXD9 1431 aa14.94□□□□□ -0.02
SNX11-206ENST00000580219 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.94□□□□□ -0.02
SNX11-206ENST00000580219 HNRNPUL2Q1KMD3 747 aaKnown RBP14.94□□□□□ -0.02
SNX11-206ENST00000580219 POLR1AO95602 1720 aaPredicted RBP14.94□□□□□ -0.02
SNX11-206ENST00000580219 TIAM1Q13009 1591 aa14.94□□□□□ -0.02
SNX11-206ENST00000580219 ESF1Q9H501 851 aaKnown RBP14.93□□□□□ -0.02
SNX11-206ENST00000580219 CEP170BQ9Y4F5 1589 aaPredicted RBP14.93□□□□□ -0.02
SNX11-206ENST00000580219 SCAPERQ9BY12 1400 aa14.92□□□□□ -0.02
SNX11-206ENST00000580219 RNF17Q9BXT8 1623 aaKnown RBP14.91□□□□□ -0.02
SNX11-206ENST00000580219 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.91□□□□□ -0.02
SNX11-206ENST00000580219 NPATQ14207 1427 aa14.91□□□□□ -0.02
SNX11-206ENST00000580219 NUP153P49790 1475 aaKnown RBP14.9□□□□□ -0.02
SNX11-206ENST00000580219 SAMD1Q6SPF0 538 aaPredicted RBP14.9□□□□□ -0.02
SNX11-206ENST00000580219 MROH2AA6NES4 1674 aa14.9□□□□□ -0.02
SNX11-206ENST00000580219 CAPN15O75808 1086 aa14.89□□□□□ -0.03
SNX11-206ENST00000580219 DIP2CQ9Y2E4 1556 aa14.89□□□□□ -0.03
SNX11-206ENST00000580219 AGLP35573 1532 aa14.88□□□□□ -0.03
SNX11-206ENST00000580219 ZEB1P37275 1124 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms