RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 SLKQ9H2G2 1235 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC8-207ENST00000580104 ST20-MTHFSA0A0A6YYL1 179 aa17.58■□□□□ 0.4
TRAPPC8-207ENST00000580104 ROCK2O75116 1388 aaKnown RBP17.58■□□□□ 0.4
TRAPPC8-207ENST00000580104 IGF1RP08069 1367 aa17.58■□□□□ 0.4
TRAPPC8-207ENST00000580104 PDE4AP27815 886 aa17.58■□□□□ 0.4
TRAPPC8-207ENST00000580104 SYNJ1O43426 1573 aa17.57■□□□□ 0.4
TRAPPC8-207ENST00000580104 NCLP19338 710 aaKnown RBP17.57■□□□□ 0.4
TRAPPC8-207ENST00000580104 RRBP1Q9P2E9 1410 aaKnown RBP17.57■□□□□ 0.4
TRAPPC8-207ENST00000580104 CFAP53Q96M91 514 aa17.55■□□□□ 0.4
TRAPPC8-207ENST00000580104 NLRP13Q86W25 1043 aa17.54■□□□□ 0.4
TRAPPC8-207ENST00000580104 MYH16Q9H6N6 1097 aa17.54■□□□□ 0.4
TRAPPC8-207ENST00000580104 CCDC184Q52MB2 194 aa17.53■□□□□ 0.4
TRAPPC8-207ENST00000580104 LRRC9Q6ZRR7 1453 aa17.52■□□□□ 0.4
TRAPPC8-207ENST00000580104 RRP1P56182 461 aaKnown RBP17.52■□□□□ 0.39
TRAPPC8-207ENST00000580104 CADPSQ9ULU8 1353 aa17.51■□□□□ 0.39
TRAPPC8-207ENST00000580104 KIF7Q2M1P5 1343 aa17.51■□□□□ 0.39
TRAPPC8-207ENST00000580104 GZF1Q9H116 711 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC8-207ENST00000580104 CCDC146Q8IYE0 955 aa17.5■□□□□ 0.39
TRAPPC8-207ENST00000580104 CCDC7Q96M83 1385 aa17.5■□□□□ 0.39
TRAPPC8-207ENST00000580104 U2SURPO15042 1029 aaKnown RBP17.49■□□□□ 0.39
TRAPPC8-207ENST00000580104 PAK3O75914 559 aaPredicted RBP17.49■□□□□ 0.39
TRAPPC8-207ENST00000580104 WDR97A6NE52 1622 aa17.49■□□□□ 0.39
TRAPPC8-207ENST00000580104 FGD6Q6ZV73 1430 aa17.49■□□□□ 0.39
TRAPPC8-207ENST00000580104 GOLGA6L22H0YM25 854 aa17.49■□□□□ 0.39
TRAPPC8-207ENST00000580104 TPRNQ4KMQ1 711 aa17.49■□□□□ 0.39
TRAPPC8-207ENST00000580104 MSH5O43196 834 aa17.48■□□□□ 0.39
TRAPPC8-207ENST00000580104 USP47Q96K76 1375 aa17.48■□□□□ 0.39
TRAPPC8-207ENST00000580104 MYBBP1AQ9BQG0 1328 aaKnown RBP17.48■□□□□ 0.39
TRAPPC8-207ENST00000580104 CRBNQ96SW2 442 aa17.47■□□□□ 0.39
TRAPPC8-207ENST00000580104 UACAQ9BZF9 1416 aa17.46■□□□□ 0.39
TRAPPC8-207ENST00000580104 PDE3BQ13370 1112 aa17.45■□□□□ 0.38
TRAPPC8-207ENST00000580104 KIF15Q9NS87 1388 aa17.45■□□□□ 0.38
TRAPPC8-207ENST00000580104 ARID4BQ4LE39 1312 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC8-207ENST00000580104 HNRNPMP52272 730 aaKnown RBP eCLIP17.45■□□□□ 0.383e-6■■■■□ 19.4
TRAPPC8-207ENST00000580104 ANKRD30AQ9BXX3 1397 aa17.45■□□□□ 0.38
TRAPPC8-207ENST00000580104 MAPK8IP3Q9UPT6 1336 aa17.45■□□□□ 0.38
TRAPPC8-207ENST00000580104 GOLGA2Q08379 1002 aa17.45■□□□□ 0.38
TRAPPC8-207ENST00000580104 HSP90AB1P08238 724 aaKnown RBP17.44■□□□□ 0.38
TRAPPC8-207ENST00000580104 CNTLNQ9NXG0 1405 aa17.44■□□□□ 0.38
TRAPPC8-207ENST00000580104 NPM1P06748 294 aaKnown RBP eCLIP17.44■□□□□ 0.38
TRAPPC8-207ENST00000580104 PLPPR3Q6T4P5 718 aa17.44■□□□□ 0.38
TRAPPC8-207ENST00000580104 CLUAP1Q96AJ1 413 aa17.43■□□□□ 0.38
TRAPPC8-207ENST00000580104 ZNF644Q9H582 1327 aaPredicted RBP17.43■□□□□ 0.38
TRAPPC8-207ENST00000580104 PANK3Q9H999 370 aa17.43■□□□□ 0.38
TRAPPC8-207ENST00000580104 MORC1Q86VD1 984 aa17.42■□□□□ 0.38
TRAPPC8-207ENST00000580104 SAFB2Q14151 953 aaKnown RBP eCLIP17.41■□□□□ 0.38
TRAPPC8-207ENST00000580104 HSCBQ8IWL3 235 aa17.4■□□□□ 0.38
TRAPPC8-207ENST00000580104 L1TD1Q5T7N2 865 aaKnown RBP17.4■□□□□ 0.38
TRAPPC8-207ENST00000580104 USP35Q9P2H5 1018 aa17.4■□□□□ 0.38
TRAPPC8-207ENST00000580104 PRXQ9BXM0 1461 aa17.39■□□□□ 0.38
TRAPPC8-207ENST00000580104 AKNAQ7Z591 1439 aa17.39■□□□□ 0.37
TRAPPC8-207ENST00000580104 GSE1Q14687 1217 aa17.39■□□□□ 0.37
TRAPPC8-207ENST00000580104 FGD5Q6ZNL6 1462 aa17.38■□□□□ 0.37
TRAPPC8-207ENST00000580104 ESF1Q9H501 851 aaKnown RBP17.37■□□□□ 0.37
TRAPPC8-207ENST00000580104 MYOM3Q5VTT5 1437 aa17.37■□□□□ 0.37
TRAPPC8-207ENST00000580104 RAD54L2Q9Y4B4 1467 aa17.36■□□□□ 0.37
TRAPPC8-207ENST00000580104 ERICH3Q5RHP9 1530 aa17.36■□□□□ 0.37
TRAPPC8-207ENST00000580104 PTMAP06454 111 aaKnown RBP17.36■□□□□ 0.37
TRAPPC8-207ENST00000580104 NBPF8Q3BBV2 869 aa17.36■□□□□ 0.37
TRAPPC8-207ENST00000580104 MFAP1P55081 439 aaKnown RBP17.35■□□□□ 0.37
TRAPPC8-207ENST00000580104 FAM161AQ3B820 660 aa17.35■□□□□ 0.37
TRAPPC8-207ENST00000580104 CDCA7LQ96GN5 454 aa17.35■□□□□ 0.37
TRAPPC8-207ENST00000580104 BCL2L13Q9BXK5 485 aa17.33■□□□□ 0.37
TRAPPC8-207ENST00000580104 RRP7AQ9Y3A4 280 aaKnown RBP17.33■□□□□ 0.37
TRAPPC8-207ENST00000580104 U2AF1L5P0DN76 240 aaPredicted RBP17.33■□□□□ 0.37
TRAPPC8-207ENST00000580104 U2AF1Q01081 240 aaKnown RBP eCLIP17.33■□□□□ 0.374e-6■□□□□ 8.3
TRAPPC8-207ENST00000580104 CENPQQ7L2Z9 268 aaPredicted RBP17.33■□□□□ 0.37
TRAPPC8-207ENST00000580104 DNTTIP2Q5QJE6 756 aaKnown RBP17.32■□□□□ 0.36
TRAPPC8-207ENST00000580104 MS4A1P11836 297 aa17.31■□□□□ 0.36
TRAPPC8-207ENST00000580104 ITPRIPQ8IWB1 547 aa17.31■□□□□ 0.36
TRAPPC8-207ENST00000580104 IL27Q8NEV9 243 aa17.31■□□□□ 0.36
TRAPPC8-207ENST00000580104 FANCD2Q9BXW9 1451 aa17.31■□□□□ 0.36
TRAPPC8-207ENST00000580104 PLEKHG5O94827 1062 aa17.31■□□□□ 0.36
TRAPPC8-207ENST00000580104 RWDD1Q9H446 243 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC8-207ENST00000580104 NCOA2Q15596 1464 aa17.3■□□□□ 0.36
TRAPPC8-207ENST00000580104 POGKQ9P215 609 aa17.3■□□□□ 0.36
TRAPPC8-207ENST00000580104 CENPJQ9HC77 1338 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC8-207ENST00000580104 PNNQ9H307 717 aaKnown RBP17.3■□□□□ 0.36
TRAPPC8-207ENST00000580104 COG6Q9Y2V7 657 aa17.29■□□□□ 0.36
TRAPPC8-207ENST00000580104 APAF1O14727 1248 aa17.28■□□□□ 0.36
TRAPPC8-207ENST00000580104 C11orf95C9JLR9 678 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC8-207ENST00000580104 APBB1O00213 710 aa17.28■□□□□ 0.36
TRAPPC8-207ENST00000580104 PLCB2Q00722 1185 aa17.28■□□□□ 0.36
TRAPPC8-207ENST00000580104 CASKIN1Q8WXD9 1431 aa17.28■□□□□ 0.36
TRAPPC8-207ENST00000580104 GOLGA6L3A6NEY3 463 aa17.27■□□□□ 0.36
TRAPPC8-207ENST00000580104 FOXD4L1Q9NU39 408 aa17.27■□□□□ 0.36
TRAPPC8-207ENST00000580104 SRPK2P78362 688 aaKnown RBP17.27■□□□□ 0.36
TRAPPC8-207ENST00000580104 CASC1Q6TDU7 716 aa17.27■□□□□ 0.36
TRAPPC8-207ENST00000580104 NFKBIBQ15653 356 aa17.26■□□□□ 0.35
TRAPPC8-207ENST00000580104 CFTRP13569 1480 aa17.26■□□□□ 0.35
TRAPPC8-207ENST00000580104 ZBTB7CA1YPR0 619 aa17.26■□□□□ 0.35
TRAPPC8-207ENST00000580104 PMFBP1Q8TBY8 1022 aa17.25■□□□□ 0.35
TRAPPC8-207ENST00000580104 PDS5BQ9NTI5 1447 aa17.25■□□□□ 0.35
TRAPPC8-207ENST00000580104 STK26Q9P289 416 aa17.25■□□□□ 0.35
TRAPPC8-207ENST00000580104 TIAM1Q13009 1591 aa17.25■□□□□ 0.35
TRAPPC8-207ENST00000580104 ANO8Q9HCE9 1232 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC8-207ENST00000580104 SMC4Q9NTJ3 1288 aa17.24■□□□□ 0.35
TRAPPC8-207ENST00000580104 CCDC144AA2RUR9 1427 aa17.24■□□□□ 0.35
TRAPPC8-207ENST00000580104 TOP2BQ02880 1626 aa17.23■□□□□ 0.35
TRAPPC8-207ENST00000580104 PNISRQ8TF01 805 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms