RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 CAMSAP1Q5T5Y3 1602 aa11.31□□□□□ -0.6
CCDC178-209ENST00000579947 SETD1AO15047 1707 aaKnown RBP11.31□□□□□ -0.6
CCDC178-209ENST00000579947 TOM1O60784 492 aa11.3□□□□□ -0.6
CCDC178-209ENST00000579947 CARMIL1Q5VZK9 1371 aa11.3□□□□□ -0.6
CCDC178-209ENST00000579947 SCAF1Q9H7N4 1312 aaKnown RBP11.3□□□□□ -0.6
CCDC178-209ENST00000579947 KIF27Q86VH2 1401 aa11.29□□□□□ -0.6
CCDC178-209ENST00000579947 PIP4K2BP78356 416 aa11.29□□□□□ -0.6
CCDC178-209ENST00000579947 HECW1Q76N89 1606 aa11.29□□□□□ -0.6
CCDC178-209ENST00000579947 ALKQ9UM73 1620 aa11.28□□□□□ -0.6
CCDC178-209ENST00000579947 CPS1P31327 1500 aa11.28□□□□□ -0.6
CCDC178-209ENST00000579947 C9orf84Q5VXU9 1444 aa11.28□□□□□ -0.6
CCDC178-209ENST00000579947 TRAPPC8Q9Y2L5 1435 aa11.27□□□□□ -0.61
CCDC178-209ENST00000579947 ATP10AO60312 1499 aa11.27□□□□□ -0.61
CCDC178-209ENST00000579947 PLA2R1Q13018 1463 aa11.25□□□□□ -0.61
CCDC178-209ENST00000579947 PTPRKQ15262 1439 aa11.25□□□□□ -0.61
CCDC178-209ENST00000579947 ATP10BO94823 1461 aa11.25□□□□□ -0.61
CCDC178-209ENST00000579947 POTEAQ6S8J7 498 aa11.24□□□□□ -0.61
CCDC178-209ENST00000579947 GOLGA3Q08378 1498 aa11.23□□□□□ -0.61
CCDC178-209ENST00000579947 ZNF142P52746 1687 aaPredicted RBP11.23□□□□□ -0.61
CCDC178-209ENST00000579947 TCOF1Q13428 1488 aaKnown RBP11.22□□□□□ -0.61
CCDC178-209ENST00000579947 NCKAP5LQ9HCH0 1330 aa11.22□□□□□ -0.61
CCDC178-209ENST00000579947 PKD2Q13563 968 aa11.22□□□□□ -0.61
CCDC178-209ENST00000579947 REREQ9P2R6 1566 aa11.2□□□□□ -0.62
CCDC178-209ENST00000579947 RAPGEF2Q9Y4G8 1499 aa11.19□□□□□ -0.62
CCDC178-209ENST00000579947 UPF1Q92900 1129 aaKnown RBP eCLIP11.19□□□□□ -0.62
CCDC178-209ENST00000579947 NPATQ14207 1427 aa11.19□□□□□ -0.62
CCDC178-209ENST00000579947 SUPT6HQ7KZ85 1726 aaKnown RBP11.18□□□□□ -0.62
CCDC178-209ENST00000579947 AGLP35573 1532 aa11.17□□□□□ -0.62
CCDC178-209ENST00000579947 CTTNBP2Q8WZ74 1663 aa11.17□□□□□ -0.62
CCDC178-209ENST00000579947 MROH2AA6NES4 1674 aa11.16□□□□□ -0.62
CCDC178-209ENST00000579947 SHANK2Q9UPX8 1470 aa11.16□□□□□ -0.62
CCDC178-209ENST00000579947 PPP6R1Q9UPN7 881 aa11.15□□□□□ -0.62
CCDC178-209ENST00000579947 MYO3AQ8NEV4 1616 aa11.15□□□□□ -0.63
CCDC178-209ENST00000579947 CNTLNQ9NXG0 1405 aa11.14□□□□□ -0.63
CCDC178-209ENST00000579947 RNF17Q9BXT8 1623 aaKnown RBP11.13□□□□□ -0.63
CCDC178-209ENST00000579947 CEP170BQ9Y4F5 1589 aaPredicted RBP11.12□□□□□ -0.63
CCDC178-209ENST00000579947 POLR1AO95602 1720 aaPredicted RBP11.11□□□□□ -0.63
CCDC178-209ENST00000579947 VWDEQ8N2E2 1590 aa11.11□□□□□ -0.63
CCDC178-209ENST00000579947 DIP2CQ9Y2E4 1556 aa11.1□□□□□ -0.63
CCDC178-209ENST00000579947 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.1□□□□□ -0.63
CCDC178-209ENST00000579947 SCAPERQ9BY12 1400 aa11.1□□□□□ -0.63
CCDC178-209ENST00000579947 NEURL4Q96JN8 1562 aa11.09□□□□□ -0.63
CCDC178-209ENST00000579947 RAPGEF6Q8TEU7 1601 aa11.08□□□□□ -0.64
CCDC178-209ENST00000579947 KDM5CP41229 1560 aa11.08□□□□□ -0.64
CCDC178-209ENST00000579947 SYNMO15061 1565 aa11.07□□□□□ -0.64
CCDC178-209ENST00000579947 ARID3CA6NKF2 412 aa11.07□□□□□ -0.64
CCDC178-209ENST00000579947 ESF1Q9H501 851 aaKnown RBP11.05□□□□□ -0.64
CCDC178-209ENST00000579947 LRRC7Q96NW7 1537 aa11.05□□□□□ -0.64
CCDC178-209ENST00000579947 ABCA6Q8N139 1617 aa11.05□□□□□ -0.64
CCDC178-209ENST00000579947 FAM9AQ8IZU1 332 aaPredicted RBP11.04□□□□□ -0.64
CCDC178-209ENST00000579947 IFFO2Q5TF58 517 aa11.03□□□□□ -0.64
CCDC178-209ENST00000579947 ZNF518AQ6AHZ1 1483 aa11.03□□□□□ -0.64
CCDC178-209ENST00000579947 SENP3Q9H4L4 574 aaPredicted RBP11.02□□□□□ -0.64
CCDC178-209ENST00000579947 DNMT1P26358 1616 aaKnown RBP11.02□□□□□ -0.65
CCDC178-209ENST00000579947 PLCH2O75038 1416 aa11.01□□□□□ -0.65
CCDC178-209ENST00000579947 CDK12Q9NYV4 1490 aaPredicted RBP11□□□□□ -0.65
CCDC178-209ENST00000579947 STRCP1A6NGW2 1772 aa11□□□□□ -0.65
CCDC178-209ENST00000579947 A2ML1A8K2U0 1454 aa11□□□□□ -0.65
CCDC178-209ENST00000579947 NUP153P49790 1475 aaKnown RBP11□□□□□ -0.65
CCDC178-209ENST00000579947 ZMYM3Q14202 1370 aa10.99□□□□□ -0.65
CCDC178-209ENST00000579947 MLH3Q9UHC1 1453 aa10.98□□□□□ -0.65
CCDC178-209ENST00000579947 FAM135BQ49AJ0 1406 aa10.97□□□□□ -0.65
CCDC178-209ENST00000579947 CDK13Q14004 1512 aaKnown RBP10.97□□□□□ -0.65
CCDC178-209ENST00000579947 DEPDC5O75140 1603 aa10.96□□□□□ -0.65
CCDC178-209ENST00000579947 CLTCQ00610 1675 aaKnown RBP10.96□□□□□ -0.65
CCDC178-209ENST00000579947 MED14O60244 1454 aa10.96□□□□□ -0.65
CCDC178-209ENST00000579947 MYO5CQ9NQX4 1742 aa10.96□□□□□ -0.65
CCDC178-209ENST00000579947 SETBP1Q9Y6X0 1596 aa10.96□□□□□ -0.65
CCDC178-209ENST00000579947 PLEKHD1A6NEE1 506 aa10.95□□□□□ -0.66
CCDC178-209ENST00000579947 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.95□□□□□ -0.66
CCDC178-209ENST00000579947 HNRNPUL2Q1KMD3 747 aaKnown RBP10.95□□□□□ -0.66
CCDC178-209ENST00000579947 SAMD9Q5K651 1589 aa10.95□□□□□ -0.66
CCDC178-209ENST00000579947 FOXD1Q16676 465 aa10.95□□□□□ -0.66
CCDC178-209ENST00000579947 TRIM52Q96A61 297 aa10.93□□□□□ -0.66
CCDC178-209ENST00000579947 LRP5O75197 1615 aa10.93□□□□□ -0.66
CCDC178-209ENST00000579947 IQGAP1P46940 1657 aa10.93□□□□□ -0.66
CCDC178-209ENST00000579947 XIRP1Q702N8 1843 aaKnown RBP10.92□□□□□ -0.66
CCDC178-209ENST00000579947 NPHP4O75161 1426 aaPredicted RBP10.92□□□□□ -0.66
CCDC178-209ENST00000579947 ZNF772Q68DY9 489 aaPredicted RBP10.91□□□□□ -0.66
CCDC178-209ENST00000579947 ZRANB1Q9UGI0 708 aa10.91□□□□□ -0.66
CCDC178-209ENST00000579947 EFCAB2Q5VUJ9 269 aa10.91□□□□□ -0.66
CCDC178-209ENST00000579947 ROBO1Q9Y6N7 1651 aa10.9□□□□□ -0.67
CCDC178-209ENST00000579947 RBM33Q96EV2 1170 aaKnown RBP10.89□□□□□ -0.67
CCDC178-209ENST00000579947 KIDINS220Q9ULH0 1771 aa10.89□□□□□ -0.67
CCDC178-209ENST00000579947 AFAP1Q8N556 730 aa10.88□□□□□ -0.67
CCDC178-209ENST00000579947 ITSN2Q9NZM3 1697 aa10.87□□□□□ -0.67
CCDC178-209ENST00000579947 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.87□□□□□ -0.67
CCDC178-209ENST00000579947 JCADQ9P266 1359 aa10.86□□□□□ -0.67
CCDC178-209ENST00000579947 RXRBP28702 533 aa10.86□□□□□ -0.67
CCDC178-209ENST00000579947 ANKLE2Q86XL3 938 aa10.86□□□□□ -0.67
CCDC178-209ENST00000579947 PHLPP1O60346 1717 aa10.86□□□□□ -0.67
CCDC178-209ENST00000579947 ABCC1P33527 1531 aa10.86□□□□□ -0.67
CCDC178-209ENST00000579947 LRP6O75581 1613 aa10.86□□□□□ -0.67
CCDC178-209ENST00000579947 MYT1LQ9UL68 1186 aa10.85□□□□□ -0.67
CCDC178-209ENST00000579947 ZC3H13Q5T200 1668 aaKnown RBP10.85□□□□□ -0.67
CCDC178-209ENST00000579947 LRRC9Q6ZRR7 1453 aa10.85□□□□□ -0.67
CCDC178-209ENST00000579947 P3H3Q8IVL6 736 aa10.84□□□□□ -0.67
CCDC178-209ENST00000579947 KDM5DQ9BY66 1539 aa10.83□□□□□ -0.67
CCDC178-209ENST00000579947 ARHGAP5Q13017 1502 aa10.83□□□□□ -0.68
CCDC178-209ENST00000579947 RGS12O14924 1447 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms