RNA–Protein interactions for RNA: ENST00000579469.1

SMIM6-202, Transcript of small integral membrane protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM6, Length 957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM6-202ENST00000579469 CDK13Q14004 1512 aaKnown RBP19.52■□□□□ 0.72
SMIM6-202ENST00000579469 ATP1B4Q9UN42 357 aaPredicted RBP19.5■□□□□ 0.71
SMIM6-202ENST00000579469 SCAPERQ9BY12 1400 aa19.5■□□□□ 0.71
SMIM6-202ENST00000579469 MYO5CQ9NQX4 1742 aa19.48■□□□□ 0.71
SMIM6-202ENST00000579469 PLCH2O75038 1416 aa19.47■□□□□ 0.71
SMIM6-202ENST00000579469 EHMT2Q96KQ7 1210 aa19.45■□□□□ 0.7
SMIM6-202ENST00000579469 ATP10AO60312 1499 aa19.44■□□□□ 0.7
SMIM6-202ENST00000579469 EFCAB2Q5VUJ9 269 aa19.44■□□□□ 0.7
SMIM6-202ENST00000579469 CERKQ8TCT0 537 aa19.43■□□□□ 0.7
SMIM6-202ENST00000579469 UBTFP17480 764 aaKnown RBP19.42■□□□□ 0.7
SMIM6-202ENST00000579469 CDK11AQ9UQ88 783 aaPredicted RBP19.42■□□□□ 0.7
SMIM6-202ENST00000579469 PREX1Q8TCU6 1659 aa19.42■□□□□ 0.7
SMIM6-202ENST00000579469 C9orf84Q5VXU9 1444 aa19.42■□□□□ 0.7
SMIM6-202ENST00000579469 FMN1Q68DA7 1419 aa19.41■□□□□ 0.7
SMIM6-202ENST00000579469 MYT1LQ9UL68 1186 aa19.4■□□□□ 0.7
SMIM6-202ENST00000579469 ARHGEF12Q9NZN5 1544 aa19.4■□□□□ 0.7
SMIM6-202ENST00000579469 KIF14Q15058 1648 aa19.38■□□□□ 0.69
SMIM6-202ENST00000579469 CEBPAP49715 358 aaPredicted RBP19.37■□□□□ 0.69
SMIM6-202ENST00000579469 ARHGAP5Q13017 1502 aa19.36■□□□□ 0.69
SMIM6-202ENST00000579469 SETD1BQ9UPS6 1966 aaKnown RBP19.36■□□□□ 0.69
SMIM6-202ENST00000579469 ZNF518AQ6AHZ1 1483 aa19.35■□□□□ 0.69
SMIM6-202ENST00000579469 CLIP1P30622 1438 aa19.34■□□□□ 0.69
SMIM6-202ENST00000579469 AFAP1Q8N556 730 aa19.33■□□□□ 0.68
SMIM6-202ENST00000579469 ARHGAP35Q9NRY4 1499 aa19.33■□□□□ 0.68
SMIM6-202ENST00000579469 DMRT2Q9Y5R5 561 aa19.32■□□□□ 0.68
SMIM6-202ENST00000579469 TROQ12816 1431 aaPredicted RBP19.32■□□□□ 0.68
SMIM6-202ENST00000579469 STRCQ7RTU9 1775 aa19.32■□□□□ 0.68
SMIM6-202ENST00000579469 LRRIQ1Q96JM4 1722 aa19.31■□□□□ 0.68
SMIM6-202ENST00000579469 KDM5CP41229 1560 aa19.31■□□□□ 0.68
SMIM6-202ENST00000579469 UHRF1BP1Q6BDS2 1440 aa19.3■□□□□ 0.68
SMIM6-202ENST00000579469 CDC42BPBQ9Y5S2 1711 aa19.3■□□□□ 0.68
SMIM6-202ENST00000579469 DIP2CQ9Y2E4 1556 aa19.28■□□□□ 0.68
SMIM6-202ENST00000579469 ESF1Q9H501 851 aaKnown RBP19.28■□□□□ 0.68
SMIM6-202ENST00000579469 C3P01024 1663 aa19.27■□□□□ 0.67
SMIM6-202ENST00000579469 ABCA6Q8N139 1617 aa19.25■□□□□ 0.67
SMIM6-202ENST00000579469 REREQ9P2R6 1566 aa19.24■□□□□ 0.67
SMIM6-202ENST00000579469 PREX2Q70Z35 1606 aa19.23■□□□□ 0.67
SMIM6-202ENST00000579469 MLH3Q9UHC1 1453 aa19.22■□□□□ 0.67
SMIM6-202ENST00000579469 ITSN2Q9NZM3 1697 aa19.22■□□□□ 0.67
SMIM6-202ENST00000579469 ABCC1P33527 1531 aa19.2■□□□□ 0.66
SMIM6-202ENST00000579469 DISP3Q9P2K9 1392 aa19.19■□□□□ 0.66
SMIM6-202ENST00000579469 TRAPPC8Q9Y2L5 1435 aa19.19■□□□□ 0.66
SMIM6-202ENST00000579469 AGLP35573 1532 aa19.19■□□□□ 0.66
SMIM6-202ENST00000579469 CCDC18Q5T9S5 1454 aa19.18■□□□□ 0.66
SMIM6-202ENST00000579469 CDC42BPAQ5VT25 1732 aa19.18■□□□□ 0.66
SMIM6-202ENST00000579469 KIDINS220Q9ULH0 1771 aa19.18■□□□□ 0.66
SMIM6-202ENST00000579469 PTPRTO14522 1441 aa19.17■□□□□ 0.66
SMIM6-202ENST00000579469 ZNF777Q9ULD5 760 aaPredicted RBP19.14■□□□□ 0.65
SMIM6-202ENST00000579469 CASKIN1Q8WXD9 1431 aa19.14■□□□□ 0.65
SMIM6-202ENST00000579469 CNTLNQ9NXG0 1405 aa19.14■□□□□ 0.65
SMIM6-202ENST00000579469 SUPT6HQ7KZ85 1726 aaKnown RBP19.11■□□□□ 0.65
SMIM6-202ENST00000579469 MROH2AA6NES4 1674 aa19.11■□□□□ 0.65
SMIM6-202ENST00000579469 ILDR2Q71H61 639 aa19.1■□□□□ 0.65
SMIM6-202ENST00000579469 SAMD9LQ8IVG5 1584 aa19.09■□□□□ 0.65
SMIM6-202ENST00000579469 NCOA1Q15788 1441 aa19.08■□□□□ 0.65
SMIM6-202ENST00000579469 CAMSAP1Q5T5Y3 1602 aa19.07■□□□□ 0.64
SMIM6-202ENST00000579469 LTBP4Q8N2S1 1624 aa19.07■□□□□ 0.64
SMIM6-202ENST00000579469 SPAG9O60271 1321 aaKnown RBP19.07■□□□□ 0.64
SMIM6-202ENST00000579469 SYCP2Q9BX26 1530 aa19.06■□□□□ 0.64
SMIM6-202ENST00000579469 FYCO1Q9BQS8 1478 aa19.06■□□□□ 0.64
SMIM6-202ENST00000579469 SOCS7O14512 581 aa19.06■□□□□ 0.64
SMIM6-202ENST00000579469 HNRNPMP52272 730 aaKnown RBP eCLIP19.06■□□□□ 0.64
SMIM6-202ENST00000579469 NPATQ14207 1427 aa19.06■□□□□ 0.64
SMIM6-202ENST00000579469 SPATA31D1Q6ZQQ2 1576 aa19.06■□□□□ 0.64
SMIM6-202ENST00000579469 ZMYM3Q14202 1370 aa19.06■□□□□ 0.64
SMIM6-202ENST00000579469 CLTCQ00610 1675 aaKnown RBP19.05■□□□□ 0.64
SMIM6-202ENST00000579469 IQSEC2Q5JU85 1478 aa19.04■□□□□ 0.64
SMIM6-202ENST00000579469 ATP7AQ04656 1500 aa19.02■□□□□ 0.64
SMIM6-202ENST00000579469 GPATCH8Q9UKJ3 1502 aaKnown RBP19.02■□□□□ 0.64
SMIM6-202ENST00000579469 NCKAP5LQ9HCH0 1330 aa19.01■□□□□ 0.63
SMIM6-202ENST00000579469 CFDP1Q9UEE9 299 aaPredicted RBP19■□□□□ 0.63
SMIM6-202ENST00000579469 PLEKHH2Q8IVE3 1493 aa18.99■□□□□ 0.63
SMIM6-202ENST00000579469 GGT6Q6P531 493 aa18.99■□□□□ 0.63
SMIM6-202ENST00000579469 MYO3AQ8NEV4 1616 aa18.99■□□□□ 0.63
SMIM6-202ENST00000579469 ZNF142P52746 1687 aaPredicted RBP18.98■□□□□ 0.63
SMIM6-202ENST00000579469 A2MP01023 1474 aa18.98■□□□□ 0.63
SMIM6-202ENST00000579469 CCNB3Q8WWL7 1395 aa18.98■□□□□ 0.63
SMIM6-202ENST00000579469 INO80Q9ULG1 1556 aaPredicted RBP18.98■□□□□ 0.63
SMIM6-202ENST00000579469 KIAA1107Q9UPP5 1409 aa18.97■□□□□ 0.63
SMIM6-202ENST00000579469 ZNF335Q9H4Z2 1342 aaPredicted RBP18.97■□□□□ 0.63
SMIM6-202ENST00000579469 ADGBQ8N7X0 1667 aa18.96■□□□□ 0.63
SMIM6-202ENST00000579469 PKD2Q13563 968 aa18.96■□□□□ 0.63
SMIM6-202ENST00000579469 PLXNC1O60486 1568 aa18.96■□□□□ 0.63
SMIM6-202ENST00000579469 UBAP1LF5GYI3 381 aa18.95■□□□□ 0.62
SMIM6-202ENST00000579469 CEP170BQ9Y4F5 1589 aaPredicted RBP18.94■□□□□ 0.62
SMIM6-202ENST00000579469 MTUS2Q5JR59 1369 aa18.93■□□□□ 0.62
SMIM6-202ENST00000579469 PTPRKQ15262 1439 aa18.93■□□□□ 0.62
SMIM6-202ENST00000579469 PLA2R1Q13018 1463 aa18.93■□□□□ 0.62
SMIM6-202ENST00000579469 PPP6R1Q9UPN7 881 aa18.91■□□□□ 0.62
SMIM6-202ENST00000579469 TCOF1Q13428 1488 aaKnown RBP18.89■□□□□ 0.61
SMIM6-202ENST00000579469 ZNF644Q9H582 1327 aaPredicted RBP18.87■□□□□ 0.61
SMIM6-202ENST00000579469 TIAM1Q13009 1591 aa18.86■□□□□ 0.61
SMIM6-202ENST00000579469 POLR1AO95602 1720 aaPredicted RBP18.86■□□□□ 0.61
SMIM6-202ENST00000579469 DNMT1P26358 1616 aaKnown RBP18.85■□□□□ 0.61
SMIM6-202ENST00000579469 A2ML1A8K2U0 1454 aa18.85■□□□□ 0.61
SMIM6-202ENST00000579469 SENP3Q9H4L4 574 aaPredicted RBP18.85■□□□□ 0.61
SMIM6-202ENST00000579469 SCAF1Q9H7N4 1312 aaKnown RBP18.83■□□□□ 0.61
SMIM6-202ENST00000579469 RTEL1-TNFRSF6BF6WH68 1400 aa18.83■□□□□ 0.6
SMIM6-202ENST00000579469 EHBP1L1Q8N3D4 1523 aa18.82■□□□□ 0.6
SMIM6-202ENST00000579469 MBD5Q9P267 1494 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms