RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 CEBPAP49715 358 aaPredicted RBP19.27■□□□□ 0.68
SUPT4H1-203ENST00000579289 MLECQ14165 292 aa19.27■□□□□ 0.68
SUPT4H1-203ENST00000579289 HNRNPUL2Q1KMD3 747 aaKnown RBP19.27■□□□□ 0.68
SUPT4H1-203ENST00000579289 ATP10AO60312 1499 aa19.26■□□□□ 0.67
SUPT4H1-203ENST00000579289 PLCH2O75038 1416 aa19.25■□□□□ 0.67
SUPT4H1-203ENST00000579289 SCAPERQ9BY12 1400 aa19.25■□□□□ 0.67
SUPT4H1-203ENST00000579289 LTBP4Q8N2S1 1624 aa19.24■□□□□ 0.67
SUPT4H1-203ENST00000579289 FAM9AQ8IZU1 332 aaPredicted RBP19.23■□□□□ 0.67
SUPT4H1-203ENST00000579289 CSRNP3Q8WYN3 585 aa19.22■□□□□ 0.67
SUPT4H1-203ENST00000579289 C9orf84Q5VXU9 1444 aa19.22■□□□□ 0.67
SUPT4H1-203ENST00000579289 SPATA31D1Q6ZQQ2 1576 aa19.2■□□□□ 0.66
SUPT4H1-203ENST00000579289 CDK13Q14004 1512 aaKnown RBP19.2■□□□□ 0.66
SUPT4H1-203ENST00000579289 PTPRTO14522 1441 aa19.19■□□□□ 0.66
SUPT4H1-203ENST00000579289 KDM5CP41229 1560 aa19.16■□□□□ 0.66
SUPT4H1-203ENST00000579289 SETD1BQ9UPS6 1966 aaKnown RBP19.16■□□□□ 0.66
SUPT4H1-203ENST00000579289 DMRT2Q9Y5R5 561 aa19.16■□□□□ 0.66
SUPT4H1-203ENST00000579289 UHRF1BP1Q6BDS2 1440 aa19.14■□□□□ 0.65
SUPT4H1-203ENST00000579289 REREQ9P2R6 1566 aa19.13■□□□□ 0.65
SUPT4H1-203ENST00000579289 C3P01024 1663 aa19.12■□□□□ 0.65
SUPT4H1-203ENST00000579289 DIP2CQ9Y2E4 1556 aa19.12■□□□□ 0.65
SUPT4H1-203ENST00000579289 IQSEC2Q5JU85 1478 aa19.11■□□□□ 0.65
SUPT4H1-203ENST00000579289 AFAP1Q8N556 730 aa19.1■□□□□ 0.65
SUPT4H1-203ENST00000579289 RANGAP1P46060 587 aaPredicted RBP19.09■□□□□ 0.65
SUPT4H1-203ENST00000579289 KIF14Q15058 1648 aa19.09■□□□□ 0.65
SUPT4H1-203ENST00000579289 EFCAB2Q5VUJ9 269 aa19.08■□□□□ 0.64
SUPT4H1-203ENST00000579289 ZNF518AQ6AHZ1 1483 aa19.08■□□□□ 0.64
SUPT4H1-203ENST00000579289 NCOA1Q15788 1441 aa19.08■□□□□ 0.64
SUPT4H1-203ENST00000579289 ABCA6Q8N139 1617 aa19.07■□□□□ 0.64
SUPT4H1-203ENST00000579289 MYO5CQ9NQX4 1742 aa19.07■□□□□ 0.64
SUPT4H1-203ENST00000579289 AGLP35573 1532 aa19.06■□□□□ 0.64
SUPT4H1-203ENST00000579289 MLH3Q9UHC1 1453 aa19.05■□□□□ 0.64
SUPT4H1-203ENST00000579289 TRAPPC8Q9Y2L5 1435 aa19.04■□□□□ 0.64
SUPT4H1-203ENST00000579289 CDC42BPBQ9Y5S2 1711 aa19■□□□□ 0.63
SUPT4H1-203ENST00000579289 LRRIQ1Q96JM4 1722 aa18.99■□□□□ 0.63
SUPT4H1-203ENST00000579289 EEA1Q15075 1411 aa18.99■□□□□ 0.63
SUPT4H1-203ENST00000579289 TROQ12816 1431 aaPredicted RBP18.98■□□□□ 0.63
SUPT4H1-203ENST00000579289 KIDINS220Q9ULH0 1771 aa18.96■□□□□ 0.63
SUPT4H1-203ENST00000579289 ARHGAP35Q9NRY4 1499 aa18.96■□□□□ 0.63
SUPT4H1-203ENST00000579289 CAMSAP1Q5T5Y3 1602 aa18.96■□□□□ 0.63
SUPT4H1-203ENST00000579289 ARHGAP5Q13017 1502 aa18.95■□□□□ 0.62
SUPT4H1-203ENST00000579289 ABCC1P33527 1531 aa18.95■□□□□ 0.62
SUPT4H1-203ENST00000579289 ZNF335Q9H4Z2 1342 aaPredicted RBP18.94■□□□□ 0.62
SUPT4H1-203ENST00000579289 NPATQ14207 1427 aa18.93■□□□□ 0.62
SUPT4H1-203ENST00000579289 NCKAP5LQ9HCH0 1330 aa18.91■□□□□ 0.62
SUPT4H1-203ENST00000579289 ITSN2Q9NZM3 1697 aa18.91■□□□□ 0.62
SUPT4H1-203ENST00000579289 FMN1Q68DA7 1419 aa18.91■□□□□ 0.62
SUPT4H1-203ENST00000579289 CNTLNQ9NXG0 1405 aa18.91■□□□□ 0.62
SUPT4H1-203ENST00000579289 TCOF1Q13428 1488 aaKnown RBP18.9■□□□□ 0.62
SUPT4H1-203ENST00000579289 MROH2AA6NES4 1674 aa18.9■□□□□ 0.62
SUPT4H1-203ENST00000579289 PREX2Q70Z35 1606 aa18.89■□□□□ 0.62
SUPT4H1-203ENST00000579289 ZMYM3Q14202 1370 aa18.89■□□□□ 0.61
SUPT4H1-203ENST00000579289 PLA2R1Q13018 1463 aa18.87■□□□□ 0.61
SUPT4H1-203ENST00000579289 ZNF142P52746 1687 aaPredicted RBP18.86■□□□□ 0.61
SUPT4H1-203ENST00000579289 CDK11AQ9UQ88 783 aaPredicted RBP18.85■□□□□ 0.61
SUPT4H1-203ENST00000579289 SAMD9LQ8IVG5 1584 aa18.85■□□□□ 0.61
SUPT4H1-203ENST00000579289 PTPRKQ15262 1439 aa18.84■□□□□ 0.61
SUPT4H1-203ENST00000579289 UBAP1LF5GYI3 381 aa18.84■□□□□ 0.61
SUPT4H1-203ENST00000579289 MYO3AQ8NEV4 1616 aa18.82■□□□□ 0.6
SUPT4H1-203ENST00000579289 PLXNC1O60486 1568 aa18.82■□□□□ 0.6
SUPT4H1-203ENST00000579289 CDC42BPAQ5VT25 1732 aa18.82■□□□□ 0.6
SUPT4H1-203ENST00000579289 MED1Q15648 1581 aaPredicted RBP18.81■□□□□ 0.6
SUPT4H1-203ENST00000579289 ATP1B4Q9UN42 357 aaPredicted RBP18.8■□□□□ 0.6
SUPT4H1-203ENST00000579289 ALKQ9UM73 1620 aa18.8■□□□□ 0.6
SUPT4H1-203ENST00000579289 CLIP1P30622 1438 aa18.8■□□□□ 0.6
SUPT4H1-203ENST00000579289 CEP170BQ9Y4F5 1589 aaPredicted RBP18.8■□□□□ 0.6
SUPT4H1-203ENST00000579289 PKD2Q13563 968 aa18.79■□□□□ 0.6
SUPT4H1-203ENST00000579289 HSPA1LP34931 641 aa18.78■□□□□ 0.6
SUPT4H1-203ENST00000579289 CLTCQ00610 1675 aaKnown RBP18.78■□□□□ 0.6
SUPT4H1-203ENST00000579289 ESF1Q9H501 851 aaKnown RBP18.77■□□□□ 0.6
SUPT4H1-203ENST00000579289 MYT1LQ9UL68 1186 aa18.77■□□□□ 0.6
SUPT4H1-203ENST00000579289 SUPT6HQ7KZ85 1726 aaKnown RBP18.75■□□□□ 0.59
SUPT4H1-203ENST00000579289 NEURL4Q96JN8 1562 aa18.74■□□□□ 0.59
SUPT4H1-203ENST00000579289 INO80Q9ULG1 1556 aaPredicted RBP18.74■□□□□ 0.59
SUPT4H1-203ENST00000579289 GPATCH8Q9UKJ3 1502 aaKnown RBP18.74■□□□□ 0.59
SUPT4H1-203ENST00000579289 DNMT1P26358 1616 aaKnown RBP18.73■□□□□ 0.59
SUPT4H1-203ENST00000579289 SYCP2Q9BX26 1530 aa18.73■□□□□ 0.59
SUPT4H1-203ENST00000579289 CASKIN1Q8WXD9 1431 aa18.73■□□□□ 0.59
SUPT4H1-203ENST00000579289 ATP7AQ04656 1500 aa18.7■□□□□ 0.58
SUPT4H1-203ENST00000579289 HNRNPMP52272 730 aaKnown RBP eCLIP18.7■□□□□ 0.58
SUPT4H1-203ENST00000579289 PPP6R1Q9UPN7 881 aa18.7■□□□□ 0.58
SUPT4H1-203ENST00000579289 A2ML1A8K2U0 1454 aa18.7■□□□□ 0.58
SUPT4H1-203ENST00000579289 KIAA1107Q9UPP5 1409 aa18.69■□□□□ 0.58
SUPT4H1-203ENST00000579289 A2MP01023 1474 aa18.69■□□□□ 0.58
SUPT4H1-203ENST00000579289 CCDC18Q5T9S5 1454 aa18.69■□□□□ 0.58
SUPT4H1-203ENST00000579289 SPAG9O60271 1321 aaKnown RBP18.68■□□□□ 0.58
SUPT4H1-203ENST00000579289 VWDEQ8N2E2 1590 aa18.68■□□□□ 0.58
SUPT4H1-203ENST00000579289 SHANK2Q9UPX8 1470 aa18.67■□□□□ 0.58
SUPT4H1-203ENST00000579289 UBTFP17480 764 aaKnown RBP18.67■□□□□ 0.58
SUPT4H1-203ENST00000579289 CPS1P31327 1500 aa18.66■□□□□ 0.58
SUPT4H1-203ENST00000579289 EHMT2Q96KQ7 1210 aa18.65■□□□□ 0.58
SUPT4H1-203ENST00000579289 POLR1AO95602 1720 aaPredicted RBP18.63■□□□□ 0.57
SUPT4H1-203ENST00000579289 PIP4K2BP78356 416 aa18.62■□□□□ 0.57
SUPT4H1-203ENST00000579289 GGT6Q6P531 493 aa18.62■□□□□ 0.57
SUPT4H1-203ENST00000579289 MBD5Q9P267 1494 aa18.61■□□□□ 0.57
SUPT4H1-203ENST00000579289 ZNF777Q9ULD5 760 aaPredicted RBP18.61■□□□□ 0.57
SUPT4H1-203ENST00000579289 MED14O60244 1454 aa18.6■□□□□ 0.57
SUPT4H1-203ENST00000579289 FBXO31Q5XUX0 539 aaPredicted RBP18.6■□□□□ 0.57
SUPT4H1-203ENST00000579289 RGS17Q9UGC6 210 aaPredicted RBP18.6■□□□□ 0.57
SUPT4H1-203ENST00000579289 TOM1O60784 492 aa18.59■□□□□ 0.57
SUPT4H1-203ENST00000579289 STRCP1A6NGW2 1772 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms