RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 ATP1B4Q9UN42 357 aaPredicted RBP14.2□□□□□ -0.14
CASC3-206ENST00000579238 CDK11AQ9UQ88 783 aaPredicted RBP14.2□□□□□ -0.14
CASC3-206ENST00000579238 SIGLEC1Q9BZZ2 1709 aa14.19□□□□□ -0.14
CASC3-206ENST00000579238 HSPA2P54652 639 aa14.19□□□□□ -0.14
CASC3-206ENST00000579238 MLECQ14165 292 aa14.19□□□□□ -0.14
CASC3-206ENST00000579238 PLPPR3Q6T4P5 718 aa14.19□□□□□ -0.14
CASC3-206ENST00000579238 ATP10AO60312 1499 aa14.18□□□□□ -0.14
CASC3-206ENST00000579238 ARHGAP35Q9NRY4 1499 aa14.18□□□□□ -0.14
CASC3-206ENST00000579238 EHMT2Q96KQ7 1210 aa14.17□□□□□ -0.14
CASC3-206ENST00000579238 C9orf84Q5VXU9 1444 aa14.16□□□□□ -0.14
CASC3-206ENST00000579238 TROQ12816 1431 aaPredicted RBP14.15□□□□□ -0.14
CASC3-206ENST00000579238 MYO5CQ9NQX4 1742 aa14.15□□□□□ -0.14
CASC3-206ENST00000579238 ARHGEF12Q9NZN5 1544 aa14.15□□□□□ -0.14
CASC3-206ENST00000579238 FER1L4A9Z1Z3 1794 aa14.14□□□□□ -0.15
CASC3-206ENST00000579238 KIF14Q15058 1648 aa14.14□□□□□ -0.15
CASC3-206ENST00000579238 ZNF518AQ6AHZ1 1483 aa14.13□□□□□ -0.15
CASC3-206ENST00000579238 CLIP1P30622 1438 aa14.13□□□□□ -0.15
CASC3-206ENST00000579238 ARHGAP5Q13017 1502 aa14.11□□□□□ -0.15
CASC3-206ENST00000579238 AFAP1Q8N556 730 aa14.11□□□□□ -0.15
CASC3-206ENST00000579238 KDM5CP41229 1560 aa14.1□□□□□ -0.15
CASC3-206ENST00000579238 CHIC1Q5VXU3 224 aa14.09□□□□□ -0.15
CASC3-206ENST00000579238 CEBPAP49715 358 aaPredicted RBP14.08□□□□□ -0.16
CASC3-206ENST00000579238 CERKQ8TCT0 537 aa14.08□□□□□ -0.16
CASC3-206ENST00000579238 MYT1LQ9UL68 1186 aa14.08□□□□□ -0.16
CASC3-206ENST00000579238 REREQ9P2R6 1566 aa14.06□□□□□ -0.16
CASC3-206ENST00000579238 PREX1Q8TCU6 1659 aa14.06□□□□□ -0.16
CASC3-206ENST00000579238 MLH3Q9UHC1 1453 aa14.06□□□□□ -0.16
CASC3-206ENST00000579238 DIP2CQ9Y2E4 1556 aa14.05□□□□□ -0.16
CASC3-206ENST00000579238 LRRIQ1Q96JM4 1722 aa14.05□□□□□ -0.16
CASC3-206ENST00000579238 CASKIN1Q8WXD9 1431 aa14.05□□□□□ -0.16
CASC3-206ENST00000579238 CCDC18Q5T9S5 1454 aa14.05□□□□□ -0.16
CASC3-206ENST00000579238 DMRT2Q9Y5R5 561 aa14.04□□□□□ -0.16
CASC3-206ENST00000579238 UHRF1BP1Q6BDS2 1440 aa14.04□□□□□ -0.16
CASC3-206ENST00000579238 CDC42BPBQ9Y5S2 1711 aa14.04□□□□□ -0.16
CASC3-206ENST00000579238 TRAPPC8Q9Y2L5 1435 aa14.03□□□□□ -0.16
CASC3-206ENST00000579238 ABCC1P33527 1531 aa14.03□□□□□ -0.16
CASC3-206ENST00000579238 PREX2Q70Z35 1606 aa14.03□□□□□ -0.16
CASC3-206ENST00000579238 SETD1BQ9UPS6 1966 aaKnown RBP14.03□□□□□ -0.16
CASC3-206ENST00000579238 ABCA6Q8N139 1617 aa14.02□□□□□ -0.16
CASC3-206ENST00000579238 AGLP35573 1532 aa14.02□□□□□ -0.16
CASC3-206ENST00000579238 ESF1Q9H501 851 aaKnown RBP14□□□□□ -0.17
CASC3-206ENST00000579238 STRCQ7RTU9 1775 aa13.99□□□□□ -0.17
CASC3-206ENST00000579238 ITSN2Q9NZM3 1697 aa13.98□□□□□ -0.17
CASC3-206ENST00000579238 FYCO1Q9BQS8 1478 aa13.98□□□□□ -0.17
CASC3-206ENST00000579238 C3P01024 1663 aa13.97□□□□□ -0.17
CASC3-206ENST00000579238 CNTLNQ9NXG0 1405 aa13.97□□□□□ -0.17
CASC3-206ENST00000579238 KIDINS220Q9ULH0 1771 aa13.96□□□□□ -0.17
CASC3-206ENST00000579238 CDC42BPAQ5VT25 1732 aa13.96□□□□□ -0.17
CASC3-206ENST00000579238 PTPRTO14522 1441 aa13.96□□□□□ -0.18
CASC3-206ENST00000579238 SAMD9LQ8IVG5 1584 aa13.94□□□□□ -0.18
CASC3-206ENST00000579238 ZNF777Q9ULD5 760 aaPredicted RBP13.94□□□□□ -0.18
CASC3-206ENST00000579238 GPATCH8Q9UKJ3 1502 aaKnown RBP13.93□□□□□ -0.18
CASC3-206ENST00000579238 SPAG9O60271 1321 aaKnown RBP13.92□□□□□ -0.18
CASC3-206ENST00000579238 SYCP2Q9BX26 1530 aa13.92□□□□□ -0.18
CASC3-206ENST00000579238 NPATQ14207 1427 aa13.91□□□□□ -0.18
CASC3-206ENST00000579238 KIAA1107Q9UPP5 1409 aa13.91□□□□□ -0.18
CASC3-206ENST00000579238 HNRNPMP52272 730 aaKnown RBP eCLIP13.91□□□□□ -0.18
CASC3-206ENST00000579238 NCOA1Q15788 1441 aa13.9□□□□□ -0.18
CASC3-206ENST00000579238 CFDP1Q9UEE9 299 aaPredicted RBP13.9□□□□□ -0.18
CASC3-206ENST00000579238 ZMYM3Q14202 1370 aa13.9□□□□□ -0.18
CASC3-206ENST00000579238 PLEKHH2Q8IVE3 1493 aa13.9□□□□□ -0.18
CASC3-206ENST00000579238 MROH2AA6NES4 1674 aa13.89□□□□□ -0.19
CASC3-206ENST00000579238 CCNB3Q8WWL7 1395 aa13.88□□□□□ -0.19
CASC3-206ENST00000579238 ATP7AQ04656 1500 aa13.88□□□□□ -0.19
CASC3-206ENST00000579238 A2MP01023 1474 aa13.87□□□□□ -0.19
CASC3-206ENST00000579238 LTBP4Q8N2S1 1624 aa13.86□□□□□ -0.19
CASC3-206ENST00000579238 MTUS2Q5JR59 1369 aa13.86□□□□□ -0.19
CASC3-206ENST00000579238 PLXNC1O60486 1568 aa13.86□□□□□ -0.19
CASC3-206ENST00000579238 IQSEC2Q5JU85 1478 aa13.86□□□□□ -0.19
CASC3-206ENST00000579238 SUPT6HQ7KZ85 1726 aaKnown RBP13.85□□□□□ -0.19
CASC3-206ENST00000579238 INO80Q9ULG1 1556 aaPredicted RBP13.85□□□□□ -0.19
CASC3-206ENST00000579238 CAMSAP1Q5T5Y3 1602 aa13.85□□□□□ -0.19
CASC3-206ENST00000579238 DISP3Q9P2K9 1392 aa13.84□□□□□ -0.19
CASC3-206ENST00000579238 PPP6R1Q9UPN7 881 aa13.84□□□□□ -0.19
CASC3-206ENST00000579238 GGT6Q6P531 493 aa13.83□□□□□ -0.2
CASC3-206ENST00000579238 PTPRKQ15262 1439 aa13.82□□□□□ -0.2
CASC3-206ENST00000579238 NCKAP5LQ9HCH0 1330 aa13.82□□□□□ -0.2
CASC3-206ENST00000579238 CLTCQ00610 1675 aaKnown RBP13.82□□□□□ -0.2
CASC3-206ENST00000579238 PKD2Q13563 968 aa13.81□□□□□ -0.2
CASC3-206ENST00000579238 PLA2R1Q13018 1463 aa13.8□□□□□ -0.2
CASC3-206ENST00000579238 ZNF644Q9H582 1327 aaPredicted RBP13.8□□□□□ -0.2
CASC3-206ENST00000579238 RTEL1-TNFRSF6BF6WH68 1400 aa13.8□□□□□ -0.2
CASC3-206ENST00000579238 MBD5Q9P267 1494 aa13.8□□□□□ -0.2
CASC3-206ENST00000579238 TIAM1Q13009 1591 aa13.79□□□□□ -0.2
CASC3-206ENST00000579238 MYO3AQ8NEV4 1616 aa13.79□□□□□ -0.2
CASC3-206ENST00000579238 ZNF142P52746 1687 aaPredicted RBP13.79□□□□□ -0.2
CASC3-206ENST00000579238 ILDR2Q71H61 639 aa13.79□□□□□ -0.2
CASC3-206ENST00000579238 EHBP1L1Q8N3D4 1523 aa13.79□□□□□ -0.2
CASC3-206ENST00000579238 CEP170BQ9Y4F5 1589 aaPredicted RBP13.79□□□□□ -0.2
CASC3-206ENST00000579238 ADGBQ8N7X0 1667 aa13.79□□□□□ -0.2
CASC3-206ENST00000579238 ZNF335Q9H4Z2 1342 aaPredicted RBP13.78□□□□□ -0.2
CASC3-206ENST00000579238 CEP162Q5TB80 1403 aa13.78□□□□□ -0.2
CASC3-206ENST00000579238 TCOF1Q13428 1488 aaKnown RBP13.78□□□□□ -0.2
CASC3-206ENST00000579238 DHX29Q7Z478 1369 aaKnown RBP13.77□□□□□ -0.21
CASC3-206ENST00000579238 SOCS7O14512 581 aa13.75□□□□□ -0.21
CASC3-206ENST00000579238 SPATA31D1Q6ZQQ2 1576 aa13.75□□□□□ -0.21
CASC3-206ENST00000579238 A2ML1A8K2U0 1454 aa13.74□□□□□ -0.21
CASC3-206ENST00000579238 UBAP1LF5GYI3 381 aa13.74□□□□□ -0.21
CASC3-206ENST00000579238 RSPH4AQ5TD94 716 aa13.74□□□□□ -0.21
CASC3-206ENST00000579238 KIF3BO15066 747 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 174.3 ms