RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 CERKQ8TCT0 537 aa14.84□□□□□ -0.03
BRIP1-204ENST00000579028 YEATS2Q9ULM3 1422 aa14.83□□□□□ -0.03
BRIP1-204ENST00000579028 TTC37Q6PGP7 1564 aa14.83□□□□□ -0.04
BRIP1-204ENST00000579028 CSRNP3Q8WYN3 585 aa14.82□□□□□ -0.04
BRIP1-204ENST00000579028 FER1L4A9Z1Z3 1794 aa14.81□□□□□ -0.04
BRIP1-204ENST00000579028 HECW1Q76N89 1606 aa14.8□□□□□ -0.04
BRIP1-204ENST00000579028 ARHGEF12Q9NZN5 1544 aa14.77□□□□□ -0.04
BRIP1-204ENST00000579028 MLECQ14165 292 aa14.76□□□□□ -0.05
BRIP1-204ENST00000579028 PREX1Q8TCU6 1659 aa14.76□□□□□ -0.05
BRIP1-204ENST00000579028 SCAPERQ9BY12 1400 aa14.75□□□□□ -0.05
BRIP1-204ENST00000579028 PLCH2O75038 1416 aa14.75□□□□□ -0.05
BRIP1-204ENST00000579028 ATP10AO60312 1499 aa14.74□□□□□ -0.05
BRIP1-204ENST00000579028 C9orf84Q5VXU9 1444 aa14.74□□□□□ -0.05
BRIP1-204ENST00000579028 EEA1Q15075 1411 aa14.73□□□□□ -0.05
BRIP1-204ENST00000579028 CDK13Q14004 1512 aaKnown RBP14.72□□□□□ -0.05
BRIP1-204ENST00000579028 RANGAP1P46060 587 aaPredicted RBP14.72□□□□□ -0.05
BRIP1-204ENST00000579028 STRCQ7RTU9 1775 aa14.71□□□□□ -0.05
BRIP1-204ENST00000579028 DISP3Q9P2K9 1392 aa14.7□□□□□ -0.06
BRIP1-204ENST00000579028 ILDR2Q71H61 639 aa14.69□□□□□ -0.06
BRIP1-204ENST00000579028 DMRT2Q9Y5R5 561 aa14.69□□□□□ -0.06
BRIP1-204ENST00000579028 SOCS7O14512 581 aa14.68□□□□□ -0.06
BRIP1-204ENST00000579028 CEBPAP49715 358 aaPredicted RBP14.68□□□□□ -0.06
BRIP1-204ENST00000579028 MYO5CQ9NQX4 1742 aa14.68□□□□□ -0.06
BRIP1-204ENST00000579028 UHRF1BP1Q6BDS2 1440 aa14.67□□□□□ -0.06
BRIP1-204ENST00000579028 EFCAB2Q5VUJ9 269 aa14.67□□□□□ -0.06
BRIP1-204ENST00000579028 SETD1BQ9UPS6 1966 aaKnown RBP14.67□□□□□ -0.06
BRIP1-204ENST00000579028 KDM5CP41229 1560 aa14.66□□□□□ -0.06
BRIP1-204ENST00000579028 ZNF518AQ6AHZ1 1483 aa14.66□□□□□ -0.06
BRIP1-204ENST00000579028 REREQ9P2R6 1566 aa14.64□□□□□ -0.07
BRIP1-204ENST00000579028 PTPRTO14522 1441 aa14.64□□□□□ -0.07
BRIP1-204ENST00000579028 DIP2CQ9Y2E4 1556 aa14.62□□□□□ -0.07
BRIP1-204ENST00000579028 KIF14Q15058 1648 aa14.62□□□□□ -0.07
BRIP1-204ENST00000579028 SPATA31D1Q6ZQQ2 1576 aa14.61□□□□□ -0.07
BRIP1-204ENST00000579028 C3P01024 1663 aa14.61□□□□□ -0.07
BRIP1-204ENST00000579028 FMN1Q68DA7 1419 aa14.6□□□□□ -0.07
BRIP1-204ENST00000579028 AFAP1Q8N556 730 aa14.6□□□□□ -0.07
BRIP1-204ENST00000579028 ARHGAP5Q13017 1502 aa14.6□□□□□ -0.07
BRIP1-204ENST00000579028 LTBP4Q8N2S1 1624 aa14.59□□□□□ -0.07
BRIP1-204ENST00000579028 TROQ12816 1431 aaPredicted RBP14.59□□□□□ -0.07
BRIP1-204ENST00000579028 CDK11AQ9UQ88 783 aaPredicted RBP14.59□□□□□ -0.07
BRIP1-204ENST00000579028 AGLP35573 1532 aa14.59□□□□□ -0.07
BRIP1-204ENST00000579028 IQSEC2Q5JU85 1478 aa14.58□□□□□ -0.08
BRIP1-204ENST00000579028 MLH3Q9UHC1 1453 aa14.58□□□□□ -0.08
BRIP1-204ENST00000579028 ABCA6Q8N139 1617 aa14.58□□□□□ -0.08
BRIP1-204ENST00000579028 ATP1B4Q9UN42 357 aaPredicted RBP14.56□□□□□ -0.08
BRIP1-204ENST00000579028 CLIP1P30622 1438 aa14.56□□□□□ -0.08
BRIP1-204ENST00000579028 TRAPPC8Q9Y2L5 1435 aa14.56□□□□□ -0.08
BRIP1-204ENST00000579028 ARHGAP35Q9NRY4 1499 aa14.56□□□□□ -0.08
BRIP1-204ENST00000579028 CDC42BPBQ9Y5S2 1711 aa14.55□□□□□ -0.08
BRIP1-204ENST00000579028 NCOA1Q15788 1441 aa14.55□□□□□ -0.08
BRIP1-204ENST00000579028 MYT1LQ9UL68 1186 aa14.54□□□□□ -0.08
BRIP1-204ENST00000579028 ABCC1P33527 1531 aa14.53□□□□□ -0.08
BRIP1-204ENST00000579028 CNTLNQ9NXG0 1405 aa14.53□□□□□ -0.08
BRIP1-204ENST00000579028 LRRIQ1Q96JM4 1722 aa14.52□□□□□ -0.08
BRIP1-204ENST00000579028 PREX2Q70Z35 1606 aa14.52□□□□□ -0.08
BRIP1-204ENST00000579028 ITSN2Q9NZM3 1697 aa14.52□□□□□ -0.09
BRIP1-204ENST00000579028 ESF1Q9H501 851 aaKnown RBP14.51□□□□□ -0.09
BRIP1-204ENST00000579028 KIDINS220Q9ULH0 1771 aa14.51□□□□□ -0.09
BRIP1-204ENST00000579028 NPATQ14207 1427 aa14.49□□□□□ -0.09
BRIP1-204ENST00000579028 MROH2AA6NES4 1674 aa14.49□□□□□ -0.09
BRIP1-204ENST00000579028 CAMSAP1Q5T5Y3 1602 aa14.48□□□□□ -0.09
BRIP1-204ENST00000579028 UBTFP17480 764 aaKnown RBP14.47□□□□□ -0.09
BRIP1-204ENST00000579028 CDC42BPAQ5VT25 1732 aa14.44□□□□□ -0.1
BRIP1-204ENST00000579028 SAMD9LQ8IVG5 1584 aa14.44□□□□□ -0.1
BRIP1-204ENST00000579028 ZMYM3Q14202 1370 aa14.44□□□□□ -0.1
BRIP1-204ENST00000579028 PLA2R1Q13018 1463 aa14.44□□□□□ -0.1
BRIP1-204ENST00000579028 CCDC18Q5T9S5 1454 aa14.44□□□□□ -0.1
BRIP1-204ENST00000579028 ZNF142P52746 1687 aaPredicted RBP14.43□□□□□ -0.1
BRIP1-204ENST00000579028 ZNF335Q9H4Z2 1342 aaPredicted RBP14.41□□□□□ -0.1
BRIP1-204ENST00000579028 NCKAP5LQ9HCH0 1330 aa14.41□□□□□ -0.1
BRIP1-204ENST00000579028 EHMT2Q96KQ7 1210 aa14.41□□□□□ -0.1
BRIP1-204ENST00000579028 MYO3AQ8NEV4 1616 aa14.41□□□□□ -0.1
BRIP1-204ENST00000579028 CASKIN1Q8WXD9 1431 aa14.41□□□□□ -0.1
BRIP1-204ENST00000579028 TCOF1Q13428 1488 aaKnown RBP14.4□□□□□ -0.1
BRIP1-204ENST00000579028 UBAP1LF5GYI3 381 aa14.4□□□□□ -0.1
BRIP1-204ENST00000579028 PKD2Q13563 968 aa14.4□□□□□ -0.1
BRIP1-204ENST00000579028 PLXNC1O60486 1568 aa14.39□□□□□ -0.11
BRIP1-204ENST00000579028 SUPT6HQ7KZ85 1726 aaKnown RBP14.39□□□□□ -0.11
BRIP1-204ENST00000579028 CLTCQ00610 1675 aaKnown RBP14.39□□□□□ -0.11
BRIP1-204ENST00000579028 CEP170BQ9Y4F5 1589 aaPredicted RBP14.39□□□□□ -0.11
BRIP1-204ENST00000579028 SYCP2Q9BX26 1530 aa14.38□□□□□ -0.11
BRIP1-204ENST00000579028 PTPRKQ15262 1439 aa14.38□□□□□ -0.11
BRIP1-204ENST00000579028 SPAG9O60271 1321 aaKnown RBP14.38□□□□□ -0.11
BRIP1-204ENST00000579028 ATP7AQ04656 1500 aa14.37□□□□□ -0.11
BRIP1-204ENST00000579028 INO80Q9ULG1 1556 aaPredicted RBP14.36□□□□□ -0.11
BRIP1-204ENST00000579028 A2MP01023 1474 aa14.36□□□□□ -0.11
BRIP1-204ENST00000579028 GPATCH8Q9UKJ3 1502 aaKnown RBP14.36□□□□□ -0.11
BRIP1-204ENST00000579028 KIAA1107Q9UPP5 1409 aa14.35□□□□□ -0.11
BRIP1-204ENST00000579028 ZNF777Q9ULD5 760 aaPredicted RBP14.35□□□□□ -0.11
BRIP1-204ENST00000579028 PLEKHH2Q8IVE3 1493 aa14.33□□□□□ -0.12
BRIP1-204ENST00000579028 FYCO1Q9BQS8 1478 aa14.33□□□□□ -0.12
BRIP1-204ENST00000579028 HNRNPMP52272 730 aaKnown RBP eCLIP14.33□□□□□ -0.12
BRIP1-204ENST00000579028 A2ML1A8K2U0 1454 aa14.31□□□□□ -0.12
BRIP1-204ENST00000579028 MED1Q15648 1581 aaPredicted RBP14.3□□□□□ -0.12
BRIP1-204ENST00000579028 DNMT1P26358 1616 aaKnown RBP14.3□□□□□ -0.12
BRIP1-204ENST00000579028 ADGBQ8N7X0 1667 aa14.3□□□□□ -0.12
BRIP1-204ENST00000579028 GGT6Q6P531 493 aa14.3□□□□□ -0.12
BRIP1-204ENST00000579028 CPS1P31327 1500 aa14.29□□□□□ -0.12
BRIP1-204ENST00000579028 POLR1AO95602 1720 aaPredicted RBP14.28□□□□□ -0.12
BRIP1-204ENST00000579028 HSPA1LP34931 641 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms