RNA–Protein interactions for RNA: ENST00000578998.1

RBFOX3-202, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 3,072 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-202ENST00000578998 PRKRIP1Q9H875 184 aaPredicted RBP18.13■□□□□ 0.49
RBFOX3-202ENST00000578998 ZNF608Q9ULD9 1512 aaPredicted RBP18.12■□□□□ 0.49
RBFOX3-202ENST00000578998 CFDP1Q9UEE9 299 aaPredicted RBP18.12■□□□□ 0.49
RBFOX3-202ENST00000578998 TARBP1Q13395 1621 aaKnown RBP18.11■□□□□ 0.49
RBFOX3-202ENST00000578998 CCDC7Q96M83 1385 aa18.11■□□□□ 0.49
RBFOX3-202ENST00000578998 ARHGEF11O15085 1522 aa18.1■□□□□ 0.49
RBFOX3-202ENST00000578998 CDK11AQ9UQ88 783 aaPredicted RBP18.1■□□□□ 0.49
RBFOX3-202ENST00000578998 TCOF1Q13428 1488 aaKnown RBP18.09■□□□□ 0.49
RBFOX3-202ENST00000578998 CNTLNQ9NXG0 1405 aa18.09■□□□□ 0.49
RBFOX3-202ENST00000578998 KIF7Q2M1P5 1343 aa18.08■□□□□ 0.49
RBFOX3-202ENST00000578998 DAPK1P53355 1430 aa18.08■□□□□ 0.48
RBFOX3-202ENST00000578998 B4GALNT3Q6L9W6 998 aa18.07■□□□□ 0.48
RBFOX3-202ENST00000578998 MIA2Q96PC5 1412 aa18.07■□□□□ 0.48
RBFOX3-202ENST00000578998 ABCC5O15440 1437 aa18.06■□□□□ 0.48
RBFOX3-202ENST00000578998 ANKRD30BQ9BXX2 1392 aa18.06■□□□□ 0.48
RBFOX3-202ENST00000578998 CHMP7Q8WUX9 453 aaPredicted RBP18.06■□□□□ 0.48
RBFOX3-202ENST00000578998 PRG4Q92954 1404 aaPredicted RBP18.06■□□□□ 0.48
RBFOX3-202ENST00000578998 KDM2AQ9Y2K7 1162 aa18.05■□□□□ 0.48
RBFOX3-202ENST00000578998 WDR62O43379 1518 aa18.04■□□□□ 0.48
RBFOX3-202ENST00000578998 PKD2Q13563 968 aa18.04■□□□□ 0.48
RBFOX3-202ENST00000578998 PBRM1Q86U86 1689 aa18.04■□□□□ 0.48
RBFOX3-202ENST00000578998 GCC2Q8IWJ2 1684 aa18.02■□□□□ 0.48
RBFOX3-202ENST00000578998 ADAMTS12P58397 1594 aa18.02■□□□□ 0.48
RBFOX3-202ENST00000578998 NCOA1Q15788 1441 aa18.01■□□□□ 0.47
RBFOX3-202ENST00000578998 PRKCSHP14314 528 aaPredicted RBP18■□□□□ 0.47
RBFOX3-202ENST00000578998 NUP153P49790 1475 aaKnown RBP17.99■□□□□ 0.47
RBFOX3-202ENST00000578998 MRC2Q9UBG0 1479 aa17.99■□□□□ 0.47
RBFOX3-202ENST00000578998 MSH5O43196 834 aa17.99■□□□□ 0.47
RBFOX3-202ENST00000578998 RPRD2Q5VT52 1461 aaKnown RBP17.99■□□□□ 0.47
RBFOX3-202ENST00000578998 AKNAQ7Z591 1439 aa17.98■□□□□ 0.47
RBFOX3-202ENST00000578998 ERICH6Q7L0X2 663 aa17.97■□□□□ 0.47
RBFOX3-202ENST00000578998 PPP4R2Q9NY27 417 aa17.97■□□□□ 0.47
RBFOX3-202ENST00000578998 PLB1Q6P1J6 1458 aa17.96■□□□□ 0.47
RBFOX3-202ENST00000578998 DISP1Q96F81 1524 aa17.96■□□□□ 0.47
RBFOX3-202ENST00000578998 SALL2Q9Y467 1007 aaPredicted RBP17.95■□□□□ 0.46
RBFOX3-202ENST00000578998 ROCK1Q13464 1354 aa17.94■□□□□ 0.46
RBFOX3-202ENST00000578998 TEX14Q8IWB6 1497 aa17.94■□□□□ 0.46
RBFOX3-202ENST00000578998 KIAA0586Q9BVV6 1533 aa17.93■□□□□ 0.46
RBFOX3-202ENST00000578998 USP47Q96K76 1375 aa17.93■□□□□ 0.46
RBFOX3-202ENST00000578998 ZBED9Q6R2W3 1325 aa17.92■□□□□ 0.46
RBFOX3-202ENST00000578998 CARD11Q9BXL7 1154 aa17.92■□□□□ 0.46
RBFOX3-202ENST00000578998 KIAA0556O60303 1618 aa17.91■□□□□ 0.46
RBFOX3-202ENST00000578998 JPH4Q96JJ6 628 aa17.91■□□□□ 0.46
RBFOX3-202ENST00000578998 NUP155O75694 1391 aa17.91■□□□□ 0.46
RBFOX3-202ENST00000578998 PLEKHD1A6NEE1 506 aa17.9■□□□□ 0.46
RBFOX3-202ENST00000578998 CAMSAP2Q08AD1 1489 aa17.9■□□□□ 0.46
RBFOX3-202ENST00000578998 HNRNPMP52272 730 aaKnown RBP eCLIP17.9■□□□□ 0.46
RBFOX3-202ENST00000578998 TMC1Q8TDI8 760 aa17.89■□□□□ 0.45
RBFOX3-202ENST00000578998 DNMT1P26358 1616 aaKnown RBP17.89■□□□□ 0.45
RBFOX3-202ENST00000578998 DCAF11Q8TEB1 546 aa17.89■□□□□ 0.45
RBFOX3-202ENST00000578998 TROQ12816 1431 aaPredicted RBP17.89■□□□□ 0.45
RBFOX3-202ENST00000578998 PZPP20742 1482 aa17.88■□□□□ 0.45
RBFOX3-202ENST00000578998 GRIN2AQ12879 1464 aa17.88■□□□□ 0.45
RBFOX3-202ENST00000578998 IFT140Q96RY7 1462 aa17.88■□□□□ 0.45
RBFOX3-202ENST00000578998 RAPGEF6Q8TEU7 1601 aa17.88■□□□□ 0.45
RBFOX3-202ENST00000578998 RGL3Q3MIN7 710 aa17.87■□□□□ 0.45
RBFOX3-202ENST00000578998 TSPY4P0CV99 314 aa17.87■□□□□ 0.45
RBFOX3-202ENST00000578998 TSPY10P0CW01 314 aa17.87■□□□□ 0.45
RBFOX3-202ENST00000578998 SPATA31E1Q6ZUB1 1445 aa17.87■□□□□ 0.45
RBFOX3-202ENST00000578998 ANKRD30AQ9BXX3 1397 aa17.86■□□□□ 0.45
RBFOX3-202ENST00000578998 ERCC6Q03468 1493 aa17.86■□□□□ 0.45
RBFOX3-202ENST00000578998 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.86■□□□□ 0.45
RBFOX3-202ENST00000578998 ST20-MTHFSA0A0A6YYL1 179 aa17.85■□□□□ 0.45
RBFOX3-202ENST00000578998 GPATCH8Q9UKJ3 1502 aaKnown RBP17.85■□□□□ 0.45
RBFOX3-202ENST00000578998 KIAA1107Q9UPP5 1409 aa17.84■□□□□ 0.45
RBFOX3-202ENST00000578998 ANKRD50Q9ULJ7 1429 aa17.84■□□□□ 0.45
RBFOX3-202ENST00000578998 KIF14Q15058 1648 aa17.83■□□□□ 0.45
RBFOX3-202ENST00000578998 DHX29Q7Z478 1369 aaKnown RBP17.81■□□□□ 0.44
RBFOX3-202ENST00000578998 CCDC136Q96JN2 1154 aa17.81■□□□□ 0.44
RBFOX3-202ENST00000578998 SLC24A1O60721 1099 aa17.79■□□□□ 0.44
RBFOX3-202ENST00000578998 EIF4G3O43432 1585 aaKnown RBP17.79■□□□□ 0.44
RBFOX3-202ENST00000578998 NUDCQ9Y266 331 aa17.78■□□□□ 0.44
RBFOX3-202ENST00000578998 ERICH6BQ5W0A0 696 aa17.78■□□□□ 0.44
RBFOX3-202ENST00000578998 CARMIL2Q6F5E8 1435 aa17.78■□□□□ 0.44
RBFOX3-202ENST00000578998 FANCIQ9NVI1 1328 aa17.77■□□□□ 0.43
RBFOX3-202ENST00000578998 BCORL1Q5H9F3 1711 aa17.76■□□□□ 0.43
RBFOX3-202ENST00000578998 PNISRQ8TF01 805 aaKnown RBP17.75■□□□□ 0.43
RBFOX3-202ENST00000578998 C9orf84Q5VXU9 1444 aa17.75■□□□□ 0.43
RBFOX3-202ENST00000578998 CEP170Q5SW79 1584 aa17.74■□□□□ 0.43
RBFOX3-202ENST00000578998 KIF15Q9NS87 1388 aa17.73■□□□□ 0.43
RBFOX3-202ENST00000578998 ROCK2O75116 1388 aaKnown RBP17.72■□□□□ 0.43
RBFOX3-202ENST00000578998 NBPF1Q3BBV0 1214 aa17.72■□□□□ 0.43
RBFOX3-202ENST00000578998 CC2D1BQ5T0F9 858 aaKnown RBP17.71■□□□□ 0.43
RBFOX3-202ENST00000578998 NBR1Q14596 966 aa17.7■□□□□ 0.42
RBFOX3-202ENST00000578998 SYNJ2O15056 1496 aa17.69■□□□□ 0.42
RBFOX3-202ENST00000578998 SMG6Q86US8 1419 aaKnown RBP17.69■□□□□ 0.42
RBFOX3-202ENST00000578998 BCL11AQ9H165 835 aa17.69■□□□□ 0.42
RBFOX3-202ENST00000578998 MBD5Q9P267 1494 aa17.69■□□□□ 0.42
RBFOX3-202ENST00000578998 ATP10BO94823 1461 aa17.68■□□□□ 0.42
RBFOX3-202ENST00000578998 ITSN2Q9NZM3 1697 aa17.67■□□□□ 0.42
RBFOX3-202ENST00000578998 MAGI1Q96QZ7 1491 aaPredicted RBP17.67■□□□□ 0.42
RBFOX3-202ENST00000578998 ADGRL2O95490 1459 aa17.66■□□□□ 0.42
RBFOX3-202ENST00000578998 NPM2Q86SE8 214 aaKnown RBP17.66■□□□□ 0.42
RBFOX3-202ENST00000578998 MYBBP1AQ9BQG0 1328 aaKnown RBP17.64■□□□□ 0.41
RBFOX3-202ENST00000578998 ADGBQ8N7X0 1667 aa17.64■□□□□ 0.41
RBFOX3-202ENST00000578998 PAK3O75914 559 aaPredicted RBP17.64■□□□□ 0.41
RBFOX3-202ENST00000578998 KDM5CP41229 1560 aa17.64■□□□□ 0.41
RBFOX3-202ENST00000578998 EXOC6Q8TAG9 804 aa17.63■□□□□ 0.41
RBFOX3-202ENST00000578998 CDCA7LQ96GN5 454 aa17.63■□□□□ 0.41
RBFOX3-202ENST00000578998 PTPRGP23470 1445 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms