RNA–Protein interactions for RNA: ENST00000578887.1

RBFOX3-201, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 2,694 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-201ENST00000578887 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.28■□□□□ 0.68
RBFOX3-201ENST00000578887 KLHL34Q8N239 644 aa19.28■□□□□ 0.68
RBFOX3-201ENST00000578887 KIAA0586Q9BVV6 1533 aa19.27■□□□□ 0.68
RBFOX3-201ENST00000578887 FAM9BQ8IZU0 186 aa19.27■□□□□ 0.68
RBFOX3-201ENST00000578887 MTUS2Q5JR59 1369 aa19.27■□□□□ 0.67
RBFOX3-201ENST00000578887 FMN1Q68DA7 1419 aa19.26■□□□□ 0.67
RBFOX3-201ENST00000578887 FOXD1Q16676 465 aa19.25■□□□□ 0.67
RBFOX3-201ENST00000578887 UGGT2Q9NYU1 1516 aa19.24■□□□□ 0.67
RBFOX3-201ENST00000578887 EIF5BO60841 1220 aaKnown RBP19.24■□□□□ 0.67
RBFOX3-201ENST00000578887 DENND4BO75064 1496 aaPredicted RBP19.22■□□□□ 0.67
RBFOX3-201ENST00000578887 SENP3-EIF4A1A0A087X0R7 540 aa19.21■□□□□ 0.67
RBFOX3-201ENST00000578887 PPP4R2Q9NY27 417 aa19.21■□□□□ 0.67
RBFOX3-201ENST00000578887 LRRIQ1Q96JM4 1722 aa19.21■□□□□ 0.67
RBFOX3-201ENST00000578887 NUP160Q12769 1436 aa19.2■□□□□ 0.66
RBFOX3-201ENST00000578887 CNGB1Q14028 1251 aaPredicted RBP19.19■□□□□ 0.66
RBFOX3-201ENST00000578887 DISP1Q96F81 1524 aa19.19■□□□□ 0.66
RBFOX3-201ENST00000578887 NCOA2Q15596 1464 aa19.19■□□□□ 0.66
RBFOX3-201ENST00000578887 KIAA0556O60303 1618 aa19.17■□□□□ 0.66
RBFOX3-201ENST00000578887 PRKRIP1Q9H875 184 aaPredicted RBP19.17■□□□□ 0.66
RBFOX3-201ENST00000578887 CHD1O14646 1710 aa19.17■□□□□ 0.66
RBFOX3-201ENST00000578887 MRS2Q9HD23 443 aa19.17■□□□□ 0.66
RBFOX3-201ENST00000578887 EIF4G2P78344 907 aaKnown RBP eCLIP19.16■□□□□ 0.66
RBFOX3-201ENST00000578887 L3MBTL2Q969R5 705 aa19.16■□□□□ 0.66
RBFOX3-201ENST00000578887 MYOM3Q5VTT5 1437 aa19.15■□□□□ 0.66
RBFOX3-201ENST00000578887 KDM6BO15054 1643 aa19.14■□□□□ 0.66
RBFOX3-201ENST00000578887 CNTLNQ9NXG0 1405 aa19.14■□□□□ 0.65
RBFOX3-201ENST00000578887 PAK3O75914 559 aaPredicted RBP19.13■□□□□ 0.65
RBFOX3-201ENST00000578887 ARID3CA6NKF2 412 aa19.11■□□□□ 0.65
RBFOX3-201ENST00000578887 NBPF8Q3BBV2 869 aa19.11■□□□□ 0.65
RBFOX3-201ENST00000578887 JPH4Q96JJ6 628 aa19.1■□□□□ 0.65
RBFOX3-201ENST00000578887 DEKP35659 375 aaKnown RBP19.1■□□□□ 0.65
RBFOX3-201ENST00000578887 TAOK2Q9UL54 1235 aa19.1■□□□□ 0.65
RBFOX3-201ENST00000578887 CCDC7Q96M83 1385 aa19.09■□□□□ 0.65
RBFOX3-201ENST00000578887 NBR1Q14596 966 aa19.09■□□□□ 0.65
RBFOX3-201ENST00000578887 MAGI3Q5TCQ9 1506 aa19.09■□□□□ 0.65
RBFOX3-201ENST00000578887 MPHOSPH9Q99550 1183 aa19.08■□□□□ 0.64
RBFOX3-201ENST00000578887 AEBP2Q6ZN18 517 aaPredicted RBP19.08■□□□□ 0.64
RBFOX3-201ENST00000578887 HECW1Q76N89 1606 aa19.07■□□□□ 0.64
RBFOX3-201ENST00000578887 ZBED9Q6R2W3 1325 aa19.07■□□□□ 0.64
RBFOX3-201ENST00000578887 ERICH6BQ5W0A0 696 aa19.06■□□□□ 0.64
RBFOX3-201ENST00000578887 AKNAQ7Z591 1439 aa19.06■□□□□ 0.64
RBFOX3-201ENST00000578887 NCOA1Q15788 1441 aa19.05■□□□□ 0.64
RBFOX3-201ENST00000578887 CDK13Q14004 1512 aaKnown RBP19.04■□□□□ 0.64
RBFOX3-201ENST00000578887 KIF7Q2M1P5 1343 aa19.03■□□□□ 0.64
RBFOX3-201ENST00000578887 EPRSP07814 1512 aaKnown RBP19.03■□□□□ 0.64
RBFOX3-201ENST00000578887 CARMIL2Q6F5E8 1435 aa19.02■□□□□ 0.63
RBFOX3-201ENST00000578887 RAPGEF6Q8TEU7 1601 aa19■□□□□ 0.63
RBFOX3-201ENST00000578887 SUPT6HQ7KZ85 1726 aaKnown RBP19■□□□□ 0.63
RBFOX3-201ENST00000578887 NOP58Q9Y2X3 529 aaKnown RBP19■□□□□ 0.63
RBFOX3-201ENST00000578887 POLR3GLQ9BT43 218 aa18.98■□□□□ 0.63
RBFOX3-201ENST00000578887 PLB1Q6P1J6 1458 aa18.98■□□□□ 0.63
RBFOX3-201ENST00000578887 NUP153P49790 1475 aaKnown RBP18.98■□□□□ 0.63
RBFOX3-201ENST00000578887 PRG4Q92954 1404 aaPredicted RBP18.97■□□□□ 0.63
RBFOX3-201ENST00000578887 EHBP1L1Q8N3D4 1523 aa18.97■□□□□ 0.63
RBFOX3-201ENST00000578887 ARHGEF11O15085 1522 aa18.95■□□□□ 0.62
RBFOX3-201ENST00000578887 PLEKHG5O94827 1062 aa18.95■□□□□ 0.62
RBFOX3-201ENST00000578887 HOMEZQ8IX15 550 aa18.93■□□□□ 0.62
RBFOX3-201ENST00000578887 GCC2Q8IWJ2 1684 aa18.93■□□□□ 0.62
RBFOX3-201ENST00000578887 SPATA31E1Q6ZUB1 1445 aa18.93■□□□□ 0.62
RBFOX3-201ENST00000578887 SHROOM2Q13796 1616 aa18.92■□□□□ 0.62
RBFOX3-201ENST00000578887 ANKRD30BQ9BXX2 1392 aa18.92■□□□□ 0.62
RBFOX3-201ENST00000578887 PODXL2Q9NZ53 605 aa18.92■□□□□ 0.62
RBFOX3-201ENST00000578887 ZNF644Q9H582 1327 aaPredicted RBP18.91■□□□□ 0.62
RBFOX3-201ENST00000578887 CCDC136Q96JN2 1154 aa18.9■□□□□ 0.62
RBFOX3-201ENST00000578887 TCOF1Q13428 1488 aaKnown RBP18.9■□□□□ 0.62
RBFOX3-201ENST00000578887 TEX14Q8IWB6 1497 aa18.9■□□□□ 0.62
RBFOX3-201ENST00000578887 ERCC6L2Q5T890 1561 aa18.9■□□□□ 0.62
RBFOX3-201ENST00000578887 ZNF326Q5BKZ1 582 aaKnown RBP18.89■□□□□ 0.62
RBFOX3-201ENST00000578887 DHX29Q7Z478 1369 aaKnown RBP18.89■□□□□ 0.61
RBFOX3-201ENST00000578887 TPRNQ4KMQ1 711 aa18.88■□□□□ 0.61
RBFOX3-201ENST00000578887 RPRD2Q5VT52 1461 aaKnown RBP18.88■□□□□ 0.61
RBFOX3-201ENST00000578887 CLASP1Q7Z460 1538 aa18.87■□□□□ 0.61
RBFOX3-201ENST00000578887 ABCA8O94911 1581 aa18.87■□□□□ 0.61
RBFOX3-201ENST00000578887 SMG6Q86US8 1419 aaKnown RBP18.87■□□□□ 0.61
RBFOX3-201ENST00000578887 SLC4A1APQ9BWU0 796 aaKnown RBP18.87■□□□□ 0.61
RBFOX3-201ENST00000578887 NUDCQ9Y266 331 aa18.87■□□□□ 0.61
RBFOX3-201ENST00000578887 PTPRGP23470 1445 aa18.85■□□□□ 0.61
RBFOX3-201ENST00000578887 RNF123Q5XPI4 1314 aa18.83■□□□□ 0.61
RBFOX3-201ENST00000578887 IPO9Q96P70 1041 aaKnown RBP18.83■□□□□ 0.6
RBFOX3-201ENST00000578887 MYT1LQ9UL68 1186 aa18.81■□□□□ 0.6
RBFOX3-201ENST00000578887 BCORL1Q5H9F3 1711 aa18.81■□□□□ 0.6
RBFOX3-201ENST00000578887 ANP32AP39687 249 aaKnown RBP18.79■□□□□ 0.6
RBFOX3-201ENST00000578887 NPM2Q86SE8 214 aaKnown RBP18.78■□□□□ 0.6
RBFOX3-201ENST00000578887 PNISRQ8TF01 805 aaKnown RBP18.78■□□□□ 0.6
RBFOX3-201ENST00000578887 PHF23Q9BUL5 403 aaPredicted RBP18.78■□□□□ 0.6
RBFOX3-201ENST00000578887 SALL2Q9Y467 1007 aaPredicted RBP18.78■□□□□ 0.6
RBFOX3-201ENST00000578887 ATP10BO94823 1461 aa18.78■□□□□ 0.6
RBFOX3-201ENST00000578887 ABCC5O15440 1437 aa18.78■□□□□ 0.6
RBFOX3-201ENST00000578887 DAPK1P53355 1430 aa18.78■□□□□ 0.6
RBFOX3-201ENST00000578887 TROQ12816 1431 aaPredicted RBP18.77■□□□□ 0.6
RBFOX3-201ENST00000578887 USP47Q96K76 1375 aa18.77■□□□□ 0.59
RBFOX3-201ENST00000578887 ZBTB47Q9UFB7 747 aaPredicted RBP18.77■□□□□ 0.59
RBFOX3-201ENST00000578887 MIA2Q96PC5 1412 aa18.76■□□□□ 0.59
RBFOX3-201ENST00000578887 KIF14Q15058 1648 aa18.75■□□□□ 0.59
RBFOX3-201ENST00000578887 EXOC6Q8TAG9 804 aa18.74■□□□□ 0.59
RBFOX3-201ENST00000578887 SKAP1Q86WV1 359 aa18.74■□□□□ 0.59
RBFOX3-201ENST00000578887 POLR1AO95602 1720 aaPredicted RBP18.73■□□□□ 0.59
RBFOX3-201ENST00000578887 TMC1Q8TDI8 760 aa18.73■□□□□ 0.59
RBFOX3-201ENST00000578887 IL27Q8NEV9 243 aa18.71■□□□□ 0.59
RBFOX3-201ENST00000578887 PZPP20742 1482 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms