RNA–Protein interactions for RNA: ENST00000578780.2

RTTN-202, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-202ENST00000578780 ABCC2Q92887 1545 aa14.45□□□□□ -0.1
RTTN-202ENST00000578780 GPATCH8Q9UKJ3 1502 aaKnown RBP14.44□□□□□ -0.1
RTTN-202ENST00000578780 OSCARQ8IYS5 282 aa14.44□□□□□ -0.1
RTTN-202ENST00000578780 CFDP1Q9UEE9 299 aaPredicted RBP14.44□□□□□ -0.1
RTTN-202ENST00000578780 ZNF644Q9H582 1327 aaPredicted RBP14.44□□□□□ -0.1
RTTN-202ENST00000578780 HFM1A2PYH4 1435 aa14.44□□□□□ -0.1
RTTN-202ENST00000578780 ZNF316A6NFI3 1004 aaPredicted RBP14.43□□□□□ -0.1
RTTN-202ENST00000578780 CHIC2Q9UKJ5 165 aa14.42□□□□□ -0.1
RTTN-202ENST00000578780 ITSN2Q9NZM3 1697 aa14.42□□□□□ -0.1
RTTN-202ENST00000578780 NAIPQ13075 1403 aa14.41□□□□□ -0.1
RTTN-202ENST00000578780 ABCC10Q5T3U5 1492 aa14.41□□□□□ -0.1
RTTN-202ENST00000578780 RRP7BPQ9NSQ0 103 aa14.4□□□□□ -0.11
RTTN-202ENST00000578780 ZNF777Q9ULD5 760 aaPredicted RBP14.4□□□□□ -0.11
RTTN-202ENST00000578780 UHRF1BP1LA0JNW5 1464 aa14.39□□□□□ -0.11
RTTN-202ENST00000578780 DAPK1P53355 1430 aa14.39□□□□□ -0.11
RTTN-202ENST00000578780 CAMSAP2Q08AD1 1489 aa14.38□□□□□ -0.11
RTTN-202ENST00000578780 ABCC5O15440 1437 aa14.38□□□□□ -0.11
RTTN-202ENST00000578780 DNMT1P26358 1616 aaKnown RBP14.37□□□□□ -0.11
RTTN-202ENST00000578780 CDC42BPAQ5VT25 1732 aa14.36□□□□□ -0.11
RTTN-202ENST00000578780 MAPKBP1O60336 1514 aa14.36□□□□□ -0.11
RTTN-202ENST00000578780 AKNAQ7Z591 1439 aa14.36□□□□□ -0.11
RTTN-202ENST00000578780 KDM5BQ9UGL1 1544 aa14.35□□□□□ -0.11
RTTN-202ENST00000578780 ZCCHC11Q5TAX3 1644 aaKnown RBP14.35□□□□□ -0.11
RTTN-202ENST00000578780 ROCK1Q13464 1354 aa14.33□□□□□ -0.12
RTTN-202ENST00000578780 KCNH8Q96L42 1107 aa14.33□□□□□ -0.12
RTTN-202ENST00000578780 GCC2Q8IWJ2 1684 aa14.33□□□□□ -0.12
RTTN-202ENST00000578780 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.3□□□□□ -0.12
RTTN-202ENST00000578780 TTC37Q6PGP7 1564 aa14.29□□□□□ -0.12
RTTN-202ENST00000578780 PREX2Q70Z35 1606 aa14.29□□□□□ -0.12
RTTN-202ENST00000578780 KDM6BO15054 1643 aa14.28□□□□□ -0.12
RTTN-202ENST00000578780 TRIM52Q96A61 297 aa14.27□□□□□ -0.12
RTTN-202ENST00000578780 SIN3AQ96ST3 1273 aa14.27□□□□□ -0.12
RTTN-202ENST00000578780 CDC42BPBQ9Y5S2 1711 aa14.27□□□□□ -0.12
RTTN-202ENST00000578780 HNRNPMP52272 730 aaKnown RBP eCLIP14.27□□□□□ -0.13
RTTN-202ENST00000578780 UBE2Q2Q8WVN8 375 aa14.27□□□□□ -0.13
RTTN-202ENST00000578780 NCOA1Q15788 1441 aa14.26□□□□□ -0.13
RTTN-202ENST00000578780 MSH5O43196 834 aa14.26□□□□□ -0.13
RTTN-202ENST00000578780 RBM19Q9Y4C8 960 aaKnown RBP14.26□□□□□ -0.13
RTTN-202ENST00000578780 CROCC2H7BZ55 1655 aa14.26□□□□□ -0.13
RTTN-202ENST00000578780 ARHGAP5Q13017 1502 aa14.25□□□□□ -0.13
RTTN-202ENST00000578780 SAMD9LQ8IVG5 1584 aa14.25□□□□□ -0.13
RTTN-202ENST00000578780 TSPY4P0CV99 314 aa14.25□□□□□ -0.13
RTTN-202ENST00000578780 TSPY10P0CW01 314 aa14.25□□□□□ -0.13
RTTN-202ENST00000578780 ADGRL2O95490 1459 aa14.24□□□□□ -0.13
RTTN-202ENST00000578780 ANKRD30AQ9BXX3 1397 aa14.24□□□□□ -0.13
RTTN-202ENST00000578780 ADGBQ8N7X0 1667 aa14.24□□□□□ -0.13
RTTN-202ENST00000578780 SALL2Q9Y467 1007 aaPredicted RBP14.24□□□□□ -0.13
RTTN-202ENST00000578780 MYO5CQ9NQX4 1742 aa14.24□□□□□ -0.13
RTTN-202ENST00000578780 MBD5Q9P267 1494 aa14.24□□□□□ -0.13
RTTN-202ENST00000578780 C9orf84Q5VXU9 1444 aa14.23□□□□□ -0.13
RTTN-202ENST00000578780 SHANK2Q9UPX8 1470 aa14.23□□□□□ -0.13
RTTN-202ENST00000578780 ARHGEF5Q12774 1597 aa14.22□□□□□ -0.13
RTTN-202ENST00000578780 WDR7Q9Y4E6 1490 aa14.22□□□□□ -0.13
RTTN-202ENST00000578780 RSPH4AQ5TD94 716 aa14.22□□□□□ -0.13
RTTN-202ENST00000578780 PLCH2O75038 1416 aa14.22□□□□□ -0.13
RTTN-202ENST00000578780 NPM1P06748 294 aaKnown RBP eCLIP14.21□□□□□ -0.13
RTTN-202ENST00000578780 MPHOSPH9Q99550 1183 aa14.21□□□□□ -0.13
RTTN-202ENST00000578780 CCDC141Q6ZP82 1450 aa14.21□□□□□ -0.14
RTTN-202ENST00000578780 EFCAB2Q5VUJ9 269 aa14.2□□□□□ -0.14
RTTN-202ENST00000578780 TIMELESSQ9UNS1 1208 aa14.19□□□□□ -0.14
RTTN-202ENST00000578780 SYCP2Q9BX26 1530 aa14.19□□□□□ -0.14
RTTN-202ENST00000578780 ASXL2Q76L83 1435 aa14.19□□□□□ -0.14
RTTN-202ENST00000578780 PLEKHH2Q8IVE3 1493 aa14.18□□□□□ -0.14
RTTN-202ENST00000578780 DENND4BO75064 1496 aaPredicted RBP14.18□□□□□ -0.14
RTTN-202ENST00000578780 KIAA1107Q9UPP5 1409 aa14.18□□□□□ -0.14
RTTN-202ENST00000578780 ANKRD50Q9ULJ7 1429 aa14.17□□□□□ -0.14
RTTN-202ENST00000578780 KIF15Q9NS87 1388 aa14.15□□□□□ -0.14
RTTN-202ENST00000578780 SLC4A1APQ9BWU0 796 aaKnown RBP14.15□□□□□ -0.14
RTTN-202ENST00000578780 DEKP35659 375 aaKnown RBP14.14□□□□□ -0.15
RTTN-202ENST00000578780 CCDC136Q96JN2 1154 aa14.14□□□□□ -0.15
RTTN-202ENST00000578780 ARHGEF12Q9NZN5 1544 aa14.14□□□□□ -0.15
RTTN-202ENST00000578780 FOXD1Q16676 465 aa14.14□□□□□ -0.15
RTTN-202ENST00000578780 TONSLQ96HA7 1378 aa14.14□□□□□ -0.15
RTTN-202ENST00000578780 ARAP3Q8WWN8 1544 aa14.13□□□□□ -0.15
RTTN-202ENST00000578780 ABCA9Q8IUA7 1624 aa14.13□□□□□ -0.15
RTTN-202ENST00000578780 MAST1Q9Y2H9 1570 aa14.12□□□□□ -0.15
RTTN-202ENST00000578780 ABCC1P33527 1531 aa14.12□□□□□ -0.15
RTTN-202ENST00000578780 PZPP20742 1482 aa14.11□□□□□ -0.15
RTTN-202ENST00000578780 PPP1R15AO75807 674 aaPredicted RBP14.11□□□□□ -0.15
RTTN-202ENST00000578780 CYB5RLQ6IPT4 315 aa14.1□□□□□ -0.15
RTTN-202ENST00000578780 MYT1LQ9UL68 1186 aa14.1□□□□□ -0.15
RTTN-202ENST00000578780 FANCAO15360 1455 aa14.09□□□□□ -0.15
RTTN-202ENST00000578780 TRAPPC8Q9Y2L5 1435 aa14.09□□□□□ -0.15
RTTN-202ENST00000578780 NUP155O75694 1391 aa14.09□□□□□ -0.15
RTTN-202ENST00000578780 ERICH6BQ5W0A0 696 aa14.08□□□□□ -0.16
RTTN-202ENST00000578780 BCANQ96GW7 911 aa14.08□□□□□ -0.16
RTTN-202ENST00000578780 ANKRD30BQ9BXX2 1392 aa14.08□□□□□ -0.16
RTTN-202ENST00000578780 AFAP1Q8N556 730 aa14.07□□□□□ -0.16
RTTN-202ENST00000578780 RIMBP3CA6NJZ7 1639 aa14.06□□□□□ -0.16
RTTN-202ENST00000578780 RIMBP3BA6NNM3 1639 aa14.06□□□□□ -0.16
RTTN-202ENST00000578780 RIMBP3Q9UFD9 1639 aa14.06□□□□□ -0.16
RTTN-202ENST00000578780 PKD2Q13563 968 aa14.06□□□□□ -0.16
RTTN-202ENST00000578780 PLXNC1O60486 1568 aa14.06□□□□□ -0.16
RTTN-202ENST00000578780 EIF5BO60841 1220 aaKnown RBP14.05□□□□□ -0.16
RTTN-202ENST00000578780 SPAG9O60271 1321 aaKnown RBP14.05□□□□□ -0.16
RTTN-202ENST00000578780 SLC24A1O60721 1099 aa14.04□□□□□ -0.16
RTTN-202ENST00000578780 KDM5DQ9BY66 1539 aa14.04□□□□□ -0.16
RTTN-202ENST00000578780 ADGRL1O94910 1474 aa14.04□□□□□ -0.16
RTTN-202ENST00000578780 CD109Q6YHK3 1445 aa14.03□□□□□ -0.16
RTTN-202ENST00000578780 SCAPERQ9BY12 1400 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms