RNA–Protein interactions for RNA: ENST00000578567.1

CCDC58P1-201, Transcript of coiled-coil domain containing 58 pseudogene 1, humanhuman

BASIC

Gene CCDC58P1, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58P1-201ENST00000578567 RAPGEF3O95398 923 aa13.83□□□□□ -0.2
CCDC58P1-201ENST00000578567 DISP1Q96F81 1524 aa13.83□□□□□ -0.2
CCDC58P1-201ENST00000578567 MED1Q15648 1581 aaPredicted RBP13.8□□□□□ -0.2
CCDC58P1-201ENST00000578567 ATXN8OSP0DMR3 200 aa13.8□□□□□ -0.2
CCDC58P1-201ENST00000578567 POTEHQ6S545 545 aa13.8□□□□□ -0.2
CCDC58P1-201ENST00000578567 IGF1RP08069 1367 aa13.79□□□□□ -0.2
CCDC58P1-201ENST00000578567 PHLDB1Q86UU1 1377 aa13.78□□□□□ -0.2
CCDC58P1-201ENST00000578567 PTPRTO14522 1441 aa13.78□□□□□ -0.2
CCDC58P1-201ENST00000578567 FRMPD1Q5SYB0 1578 aa13.77□□□□□ -0.21
CCDC58P1-201ENST00000578567 ZBTB12Q9Y330 459 aaPredicted RBP13.77□□□□□ -0.21
CCDC58P1-201ENST00000578567 PREX1Q8TCU6 1659 aa13.75□□□□□ -0.21
CCDC58P1-201ENST00000578567 IQGAP2Q13576 1575 aa13.75□□□□□ -0.21
CCDC58P1-201ENST00000578567 TTC37Q6PGP7 1564 aa13.73□□□□□ -0.21
CCDC58P1-201ENST00000578567 ARHGEF40Q8TER5 1519 aa13.71□□□□□ -0.21
CCDC58P1-201ENST00000578567 SIGLEC1Q9BZZ2 1709 aa13.71□□□□□ -0.21
CCDC58P1-201ENST00000578567 UBAP1LF5GYI3 381 aa13.71□□□□□ -0.21
CCDC58P1-201ENST00000578567 POGZQ7Z3K3 1410 aa13.7□□□□□ -0.22
CCDC58P1-201ENST00000578567 NEO1Q92859 1461 aa13.68□□□□□ -0.22
CCDC58P1-201ENST00000578567 FER1L4A9Z1Z3 1794 aa13.68□□□□□ -0.22
CCDC58P1-201ENST00000578567 FANCAO15360 1455 aa13.67□□□□□ -0.22
CCDC58P1-201ENST00000578567 UGGT2Q9NYU1 1516 aa13.66□□□□□ -0.22
CCDC58P1-201ENST00000578567 KIAA0556O60303 1618 aa13.66□□□□□ -0.22
CCDC58P1-201ENST00000578567 HSPA1LP34931 641 aa13.66□□□□□ -0.22
CCDC58P1-201ENST00000578567 CEBPAP49715 358 aaPredicted RBP13.65□□□□□ -0.22
CCDC58P1-201ENST00000578567 CARMIL1Q5VZK9 1371 aa13.65□□□□□ -0.22
CCDC58P1-201ENST00000578567 ABCA9Q8IUA7 1624 aa13.64□□□□□ -0.23
CCDC58P1-201ENST00000578567 MLECQ14165 292 aa13.64□□□□□ -0.23
CCDC58P1-201ENST00000578567 UHRF1BP1Q6BDS2 1440 aa13.64□□□□□ -0.23
CCDC58P1-201ENST00000578567 ABCA8O94911 1581 aa13.62□□□□□ -0.23
CCDC58P1-201ENST00000578567 AKNAQ7Z591 1439 aa13.61□□□□□ -0.23
CCDC58P1-201ENST00000578567 RICTORQ6R327 1708 aa13.61□□□□□ -0.23
CCDC58P1-201ENST00000578567 ARHGEF12Q9NZN5 1544 aa13.6□□□□□ -0.23
CCDC58P1-201ENST00000578567 KIF27Q86VH2 1401 aa13.6□□□□□ -0.23
CCDC58P1-201ENST00000578567 SETD1BQ9UPS6 1966 aaKnown RBP13.6□□□□□ -0.23
CCDC58P1-201ENST00000578567 FHOD3Q2V2M9 1422 aa13.58□□□□□ -0.24
CCDC58P1-201ENST00000578567 DENND4BO75064 1496 aaPredicted RBP13.57□□□□□ -0.24
CCDC58P1-201ENST00000578567 AKT1S1Q96B36 256 aa13.57□□□□□ -0.24
CCDC58P1-201ENST00000578567 ZNF335Q9H4Z2 1342 aaPredicted RBP13.57□□□□□ -0.24
CCDC58P1-201ENST00000578567 NCOA1Q15788 1441 aa13.56□□□□□ -0.24
CCDC58P1-201ENST00000578567 RGS17Q9UGC6 210 aaPredicted RBP13.55□□□□□ -0.24
CCDC58P1-201ENST00000578567 ZFYVE16Q7Z3T8 1539 aa13.54□□□□□ -0.24
CCDC58P1-201ENST00000578567 ZMYM4Q5VZL5 1548 aa13.54□□□□□ -0.24
CCDC58P1-201ENST00000578567 EFCAB5A4FU69 1503 aa13.53□□□□□ -0.24
CCDC58P1-201ENST00000578567 CHRDL2Q6WN34 429 aa13.52□□□□□ -0.25
CCDC58P1-201ENST00000578567 ATP10BO94823 1461 aa13.52□□□□□ -0.25
CCDC58P1-201ENST00000578567 PIP4K2BP78356 416 aa13.51□□□□□ -0.25
CCDC58P1-201ENST00000578567 MAGI2Q86UL8 1455 aa13.5□□□□□ -0.25
CCDC58P1-201ENST00000578567 ARID3CA6NKF2 412 aa13.49□□□□□ -0.25
CCDC58P1-201ENST00000578567 HECW1Q76N89 1606 aa13.46□□□□□ -0.26
CCDC58P1-201ENST00000578567 TOM1O60784 492 aa13.45□□□□□ -0.26
CCDC58P1-201ENST00000578567 NCKAP5LQ9HCH0 1330 aa13.44□□□□□ -0.26
CCDC58P1-201ENST00000578567 CAMSAP1Q5T5Y3 1602 aa13.44□□□□□ -0.26
CCDC58P1-201ENST00000578567 C3P01024 1663 aa13.44□□□□□ -0.26
CCDC58P1-201ENST00000578567 ATP10AO60312 1499 aa13.43□□□□□ -0.26
CCDC58P1-201ENST00000578567 TRAPPC8Q9Y2L5 1435 aa13.43□□□□□ -0.26
CCDC58P1-201ENST00000578567 C9orf84Q5VXU9 1444 aa13.42□□□□□ -0.26
CCDC58P1-201ENST00000578567 REM2Q8IYK8 340 aaPredicted RBP13.42□□□□□ -0.26
CCDC58P1-201ENST00000578567 GOLGA3Q08378 1498 aa13.42□□□□□ -0.26
CCDC58P1-201ENST00000578567 POTEAQ6S8J7 498 aa13.4□□□□□ -0.26
CCDC58P1-201ENST00000578567 CSRNP3Q8WYN3 585 aa13.39□□□□□ -0.27
CCDC58P1-201ENST00000578567 RAPGEF2Q9Y4G8 1499 aa13.39□□□□□ -0.27
CCDC58P1-201ENST00000578567 CFAP74Q9C0B2 1584 aa13.39□□□□□ -0.27
CCDC58P1-201ENST00000578567 ALKQ9UM73 1620 aa13.39□□□□□ -0.27
CCDC58P1-201ENST00000578567 PKD2Q13563 968 aa13.35□□□□□ -0.27
CCDC58P1-201ENST00000578567 SPDYE2BA6NHP3 402 aa13.34□□□□□ -0.27
CCDC58P1-201ENST00000578567 SPDYE6P0CI01 402 aa13.34□□□□□ -0.27
CCDC58P1-201ENST00000578567 SPDYE2Q495Y8 402 aa13.34□□□□□ -0.27
CCDC58P1-201ENST00000578567 PLA2R1Q13018 1463 aa13.33□□□□□ -0.28
CCDC58P1-201ENST00000578567 TCOF1Q13428 1488 aaKnown RBP13.33□□□□□ -0.28
CCDC58P1-201ENST00000578567 SETD1AO15047 1707 aaKnown RBP13.33□□□□□ -0.28
CCDC58P1-201ENST00000578567 SCAPERQ9BY12 1400 aa13.32□□□□□ -0.28
CCDC58P1-201ENST00000578567 MKRN4PQ13434 485 aaPredicted RBP13.32□□□□□ -0.28
CCDC58P1-201ENST00000578567 CTTNBP2Q8WZ74 1663 aa13.31□□□□□ -0.28
CCDC58P1-201ENST00000578567 CPS1P31327 1500 aa13.31□□□□□ -0.28
CCDC58P1-201ENST00000578567 PTPRKQ15262 1439 aa13.3□□□□□ -0.28
CCDC58P1-201ENST00000578567 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.3□□□□□ -0.28
CCDC58P1-201ENST00000578567 UPF1Q92900 1129 aaKnown RBP eCLIP13.29□□□□□ -0.28
CCDC58P1-201ENST00000578567 NPATQ14207 1427 aa13.27□□□□□ -0.29
CCDC58P1-201ENST00000578567 SHANK2Q9UPX8 1470 aa13.26□□□□□ -0.29
CCDC58P1-201ENST00000578567 AGLP35573 1532 aa13.25□□□□□ -0.29
CCDC58P1-201ENST00000578567 PITPNM1O00562 1244 aa13.25□□□□□ -0.29
CCDC58P1-201ENST00000578567 FAM9AQ8IZU1 332 aaPredicted RBP13.25□□□□□ -0.29
CCDC58P1-201ENST00000578567 ESF1Q9H501 851 aaKnown RBP13.25□□□□□ -0.29
CCDC58P1-201ENST00000578567 RAPGEF6Q8TEU7 1601 aa13.24□□□□□ -0.29
CCDC58P1-201ENST00000578567 REREQ9P2R6 1566 aa13.24□□□□□ -0.29
CCDC58P1-201ENST00000578567 P3H3Q8IVL6 736 aa13.24□□□□□ -0.29
CCDC58P1-201ENST00000578567 ZNF142P52746 1687 aaPredicted RBP13.24□□□□□ -0.29
CCDC58P1-201ENST00000578567 PLEKHD1A6NEE1 506 aa13.23□□□□□ -0.29
CCDC58P1-201ENST00000578567 DIP2CQ9Y2E4 1556 aa13.23□□□□□ -0.29
CCDC58P1-201ENST00000578567 CNTLNQ9NXG0 1405 aa13.22□□□□□ -0.29
CCDC58P1-201ENST00000578567 NUP153P49790 1475 aaKnown RBP13.22□□□□□ -0.29
CCDC58P1-201ENST00000578567 SUPT6HQ7KZ85 1726 aaKnown RBP13.22□□□□□ -0.29
CCDC58P1-201ENST00000578567 PLCH2O75038 1416 aa13.21□□□□□ -0.3
CCDC58P1-201ENST00000578567 PIP4P2Q8N4L2 257 aa13.2□□□□□ -0.3
CCDC58P1-201ENST00000578567 MYO3AQ8NEV4 1616 aa13.2□□□□□ -0.3
CCDC58P1-201ENST00000578567 CEP170BQ9Y4F5 1589 aaPredicted RBP13.2□□□□□ -0.3
CCDC58P1-201ENST00000578567 ZMYM3Q14202 1370 aa13.2□□□□□ -0.3
CCDC58P1-201ENST00000578567 KDM5CP41229 1560 aa13.19□□□□□ -0.3
CCDC58P1-201ENST00000578567 MROH2AA6NES4 1674 aa13.18□□□□□ -0.3
CCDC58P1-201ENST00000578567 AFAP1Q8N556 730 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms