RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 CAMSAP2Q08AD1 1489 aa40.43■■■■■ 4.06
LIMD2-203ENST00000578067 ROCK1Q13464 1354 aa40.4■■■■■ 4.06
LIMD2-203ENST00000578067 CDC42BPAQ5VT25 1732 aa40.35■■■■■ 4.05
LIMD2-203ENST00000578067 ZNF777Q9ULD5 760 aaPredicted RBP40.31■■■■■ 4.04
LIMD2-203ENST00000578067 UHRF1BP1LA0JNW5 1464 aa40.28■■■■■ 4.04
LIMD2-203ENST00000578067 DIEXFQ68CQ4 756 aaKnown RBP40.28■■■■■ 4.04
LIMD2-203ENST00000578067 SIN3AQ96ST3 1273 aa40.28■■■■■ 4.04
LIMD2-203ENST00000578067 KDM6BO15054 1643 aa40.25■■■■■ 4.03
LIMD2-203ENST00000578067 TIMELESSQ9UNS1 1208 aa40.22■■■■■ 4.03
LIMD2-203ENST00000578067 NEUROD1Q13562 356 aa40.21■■■■■ 4.03
LIMD2-203ENST00000578067 ACIN1Q9UKV3 1341 aaKnown RBP40.21■■■■■ 4.03
LIMD2-203ENST00000578067 CROCC2H7BZ55 1655 aa40.18■■■■■ 4.02
LIMD2-203ENST00000578067 ADGBQ8N7X0 1667 aa40.15■■■■■ 4.02
LIMD2-203ENST00000578067 TRIM52Q96A61 297 aa40.15■■■■■ 4.02
LIMD2-203ENST00000578067 KDM5BQ9UGL1 1544 aa40.14■■■■■ 4.02
LIMD2-203ENST00000578067 ADGRL2O95490 1459 aa40.14■■■■■ 4.02
LIMD2-203ENST00000578067 ZCCHC11Q5TAX3 1644 aaKnown RBP40.13■■■■■ 4.01
LIMD2-203ENST00000578067 PREX2Q70Z35 1606 aa40.12■■■■■ 4.01
LIMD2-203ENST00000578067 NCOA1Q15788 1441 aa40.12■■■■■ 4.01
LIMD2-203ENST00000578067 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP40.08■■■■■ 4.01
LIMD2-203ENST00000578067 CDC42BPBQ9Y5S2 1711 aa40.07■■■■■ 4.01
LIMD2-203ENST00000578067 OSCARQ8IYS5 282 aa40.07■■■■■ 4.01
LIMD2-203ENST00000578067 SHANK2Q9UPX8 1470 aa40.06■■■■■ 4
LIMD2-203ENST00000578067 TTC37Q6PGP7 1564 aa40.06■■■■■ 4
LIMD2-203ENST00000578067 ANKRD30AQ9BXX3 1397 aa40.05■■■■■ 4
LIMD2-203ENST00000578067 DENND4BO75064 1496 aaPredicted RBP40.03■■■■■ 4
LIMD2-203ENST00000578067 ARHGEF5Q12774 1597 aa40.03■■■■■ 4
LIMD2-203ENST00000578067 MPHOSPH9Q99550 1183 aa40.01■■■■■ 4
LIMD2-203ENST00000578067 SAMD9LQ8IVG5 1584 aa40.01■■■■□ 3.99
LIMD2-203ENST00000578067 MBD5Q9P267 1494 aa39.98■■■■□ 3.99
LIMD2-203ENST00000578067 C9orf84Q5VXU9 1444 aa39.98■■■■□ 3.99
LIMD2-203ENST00000578067 KCNH8Q96L42 1107 aa39.97■■■■□ 3.99
LIMD2-203ENST00000578067 HNRNPMP52272 730 aaKnown RBP eCLIP39.96■■■■□ 3.99
LIMD2-203ENST00000578067 TSPY4P0CV99 314 aa39.96■■■■□ 3.99
LIMD2-203ENST00000578067 TSPY10P0CW01 314 aa39.96■■■■□ 3.99
LIMD2-203ENST00000578067 TONSLQ96HA7 1378 aa39.95■■■■□ 3.99
LIMD2-203ENST00000578067 ARHGAP5Q13017 1502 aa39.94■■■■□ 3.98
LIMD2-203ENST00000578067 MYO5CQ9NQX4 1742 aa39.94■■■■□ 3.98
LIMD2-203ENST00000578067 PPP1R15AO75807 674 aaPredicted RBP39.92■■■■□ 3.98
LIMD2-203ENST00000578067 RSPH4AQ5TD94 716 aa39.92■■■■□ 3.98
LIMD2-203ENST00000578067 CCDC141Q6ZP82 1450 aa39.9■■■■□ 3.98
LIMD2-203ENST00000578067 ANKRD50Q9ULJ7 1429 aa39.85■■■■□ 3.97
LIMD2-203ENST00000578067 PLCH2O75038 1416 aa39.84■■■■□ 3.97
LIMD2-203ENST00000578067 PLEKHH2Q8IVE3 1493 aa39.83■■■■□ 3.97
LIMD2-203ENST00000578067 SYCP2Q9BX26 1530 aa39.82■■■■□ 3.96
LIMD2-203ENST00000578067 KIAA1107Q9UPP5 1409 aa39.81■■■■□ 3.96
LIMD2-203ENST00000578067 SLC4A1APQ9BWU0 796 aaKnown RBP39.8■■■■□ 3.96
LIMD2-203ENST00000578067 PZPP20742 1482 aa39.77■■■■□ 3.96
LIMD2-203ENST00000578067 WDR7Q9Y4E6 1490 aa39.76■■■■□ 3.96
LIMD2-203ENST00000578067 KIF15Q9NS87 1388 aa39.75■■■■□ 3.95
LIMD2-203ENST00000578067 FOXD1Q16676 465 aa39.74■■■■□ 3.95
LIMD2-203ENST00000578067 ANKRD30BQ9BXX2 1392 aa39.74■■■■□ 3.95
LIMD2-203ENST00000578067 EFCAB2Q5VUJ9 269 aa39.74■■■■□ 3.95
LIMD2-203ENST00000578067 MAST1Q9Y2H9 1570 aa39.73■■■■□ 3.95
LIMD2-203ENST00000578067 ARAP3Q8WWN8 1544 aa39.67■■■■□ 3.94
LIMD2-203ENST00000578067 ARHGEF12Q9NZN5 1544 aa39.64■■■■□ 3.94
LIMD2-203ENST00000578067 RPRD2Q5VT52 1461 aaKnown RBP39.61■■■■□ 3.93
LIMD2-203ENST00000578067 ASXL2Q76L83 1435 aa39.6■■■■□ 3.93
LIMD2-203ENST00000578067 ABCC1P33527 1531 aa39.6■■■■□ 3.93
LIMD2-203ENST00000578067 KDM5DQ9BY66 1539 aa39.59■■■■□ 3.93
LIMD2-203ENST00000578067 NUP155O75694 1391 aa39.58■■■■□ 3.93
LIMD2-203ENST00000578067 ABCA9Q8IUA7 1624 aa39.57■■■■□ 3.92
LIMD2-203ENST00000578067 PLXNC1O60486 1568 aa39.56■■■■□ 3.92
LIMD2-203ENST00000578067 NPM1P06748 294 aaKnown RBP eCLIP39.55■■■■□ 3.92
LIMD2-203ENST00000578067 MIER1Q8N108 512 aa39.55■■■■□ 3.92
LIMD2-203ENST00000578067 PKD2Q13563 968 aa39.53■■■■□ 3.92
LIMD2-203ENST00000578067 L3MBTL2Q969R5 705 aa39.48■■■■□ 3.91
LIMD2-203ENST00000578067 TRAPPC8Q9Y2L5 1435 aa39.47■■■■□ 3.91
LIMD2-203ENST00000578067 FANCAO15360 1455 aa39.43■■■■□ 3.9
LIMD2-203ENST00000578067 DUOX2Q9NRD8 1548 aa39.43■■■■□ 3.9
LIMD2-203ENST00000578067 TEX14Q8IWB6 1497 aa39.42■■■■□ 3.9
LIMD2-203ENST00000578067 UNC13BO14795 1591 aa39.37■■■■□ 3.89
LIMD2-203ENST00000578067 RTEL1-TNFRSF6BF6WH68 1400 aa39.36■■■■□ 3.89
LIMD2-203ENST00000578067 FAM135AQ9P2D6 1515 aa39.35■■■■□ 3.89
LIMD2-203ENST00000578067 ERBINQ96RT1 1412 aa39.35■■■■□ 3.89
LIMD2-203ENST00000578067 SPAG9O60271 1321 aaKnown RBP39.34■■■■□ 3.89
LIMD2-203ENST00000578067 AFAP1Q8N556 730 aa39.31■■■■□ 3.88
LIMD2-203ENST00000578067 HIRIP3Q9BW71 556 aaPredicted RBP39.3■■■■□ 3.88
LIMD2-203ENST00000578067 ADGRL1O94910 1474 aa39.27■■■■□ 3.88
LIMD2-203ENST00000578067 ZFYVE16Q7Z3T8 1539 aa39.27■■■■□ 3.88
LIMD2-203ENST00000578067 SCAPERQ9BY12 1400 aa39.24■■■■□ 3.87
LIMD2-203ENST00000578067 IQGAP3Q86VI3 1631 aa39.22■■■■□ 3.87
LIMD2-203ENST00000578067 MAGI2Q86UL8 1455 aa39.22■■■■□ 3.87
LIMD2-203ENST00000578067 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.21■■■■□ 3.87
LIMD2-203ENST00000578067 NBPF8Q3BBV2 869 aa39.19■■■■□ 3.86
LIMD2-203ENST00000578067 INO80Q9ULG1 1556 aaPredicted RBP39.18■■■■□ 3.86
LIMD2-203ENST00000578067 CD109Q6YHK3 1445 aa39.18■■■■□ 3.86
LIMD2-203ENST00000578067 ATP7AQ04656 1500 aa39.17■■■■□ 3.86
LIMD2-203ENST00000578067 DDX10Q13206 875 aaKnown RBP39.16■■■■□ 3.86
LIMD2-203ENST00000578067 EIF4G2P78344 907 aaKnown RBP eCLIP39.13■■■■□ 3.85
LIMD2-203ENST00000578067 HSPA5P11021 654 aaKnown RBP39.13■■■■□ 3.85
LIMD2-203ENST00000578067 CFAP74Q9C0B2 1584 aa39.12■■■■□ 3.85
LIMD2-203ENST00000578067 CENPBP07199 599 aaPredicted RBP39.06■■■■□ 3.84
LIMD2-203ENST00000578067 CYB5RLQ6IPT4 315 aa39.06■■■■□ 3.84
LIMD2-203ENST00000578067 RIMBP3CA6NJZ7 1639 aa39.06■■■■□ 3.84
LIMD2-203ENST00000578067 RIMBP3BA6NNM3 1639 aa39.06■■■■□ 3.84
LIMD2-203ENST00000578067 RIMBP3Q9UFD9 1639 aa39.06■■■■□ 3.84
LIMD2-203ENST00000578067 ZNF518AQ6AHZ1 1483 aa39.04■■■■□ 3.84
LIMD2-203ENST00000578067 MYT1LQ9UL68 1186 aa39.02■■■■□ 3.84
LIMD2-203ENST00000578067 CCDC144AA2RUR9 1427 aa39.02■■■■□ 3.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms