RNA–Protein interactions for RNA: ENST00000575671.5

TRAP1-212, Transcript of TNF receptor associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAP1, Length 2,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-212ENST00000575671 CDC42BPAQ5VT25 1732 aa18.57■□□□□ 0.56
TRAP1-212ENST00000575671 GCC2Q8IWJ2 1684 aa18.55■□□□□ 0.56
TRAP1-212ENST00000575671 AKNAQ7Z591 1439 aa18.55■□□□□ 0.56
TRAP1-212ENST00000575671 UHRF1BP1LA0JNW5 1464 aa18.52■□□□□ 0.55
TRAP1-212ENST00000575671 ZCCHC11Q5TAX3 1644 aaKnown RBP18.51■□□□□ 0.55
TRAP1-212ENST00000575671 ROCK1Q13464 1354 aa18.51■□□□□ 0.55
TRAP1-212ENST00000575671 NEUROD1Q13562 356 aa18.51■□□□□ 0.55
TRAP1-212ENST00000575671 KDM6BO15054 1643 aa18.51■□□□□ 0.55
TRAP1-212ENST00000575671 SIN3AQ96ST3 1273 aa18.5■□□□□ 0.55
TRAP1-212ENST00000575671 KCNH8Q96L42 1107 aa18.5■□□□□ 0.55
TRAP1-212ENST00000575671 ZNF316A6NFI3 1004 aaPredicted RBP18.49■□□□□ 0.55
TRAP1-212ENST00000575671 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
TRAP1-212ENST00000575671 TRIM52Q96A61 297 aa18.49■□□□□ 0.55
TRAP1-212ENST00000575671 KDM5BQ9UGL1 1544 aa18.48■□□□□ 0.55
TRAP1-212ENST00000575671 TTC37Q6PGP7 1564 aa18.47■□□□□ 0.55
TRAP1-212ENST00000575671 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.46■□□□□ 0.558e-8■■□□□ 12
TRAP1-212ENST00000575671 PREX2Q70Z35 1606 aa18.46■□□□□ 0.55
TRAP1-212ENST00000575671 CROCC2H7BZ55 1655 aa18.45■□□□□ 0.54
TRAP1-212ENST00000575671 CDC42BPBQ9Y5S2 1711 aa18.45■□□□□ 0.54
TRAP1-212ENST00000575671 ADGBQ8N7X0 1667 aa18.43■□□□□ 0.54
TRAP1-212ENST00000575671 HNRNPMP52272 730 aaKnown RBP eCLIP18.43■□□□□ 0.542e-7■■■□□ 17.4
TRAP1-212ENST00000575671 NCOA1Q15788 1441 aa18.43■□□□□ 0.54
TRAP1-212ENST00000575671 ARHGAP5Q13017 1502 aa18.42■□□□□ 0.54
TRAP1-212ENST00000575671 SAMD9LQ8IVG5 1584 aa18.41■□□□□ 0.54
TRAP1-212ENST00000575671 DIEXFQ68CQ4 756 aaKnown RBP18.41■□□□□ 0.54
TRAP1-212ENST00000575671 ANKRD30AQ9BXX3 1397 aa18.4■□□□□ 0.54
TRAP1-212ENST00000575671 ADGRL2O95490 1459 aa18.4■□□□□ 0.54
TRAP1-212ENST00000575671 C9orf84Q5VXU9 1444 aa18.39■□□□□ 0.54
TRAP1-212ENST00000575671 MYO5CQ9NQX4 1742 aa18.39■□□□□ 0.54
TRAP1-212ENST00000575671 TSPY4P0CV99 314 aa18.39■□□□□ 0.53
TRAP1-212ENST00000575671 TSPY10P0CW01 314 aa18.39■□□□□ 0.53
TRAP1-212ENST00000575671 SHANK2Q9UPX8 1470 aa18.38■□□□□ 0.53
TRAP1-212ENST00000575671 MPHOSPH9Q99550 1183 aa18.38■□□□□ 0.53
TRAP1-212ENST00000575671 MBD5Q9P267 1494 aa18.37■□□□□ 0.53
TRAP1-212ENST00000575671 ARHGEF5Q12774 1597 aa18.37■□□□□ 0.53
TRAP1-212ENST00000575671 PELP1Q8IZL8 1130 aaKnown RBP18.35■□□□□ 0.53
TRAP1-212ENST00000575671 DENND4BO75064 1496 aaPredicted RBP18.35■□□□□ 0.53
TRAP1-212ENST00000575671 SYCP2Q9BX26 1530 aa18.35■□□□□ 0.53
TRAP1-212ENST00000575671 CCDC141Q6ZP82 1450 aa18.35■□□□□ 0.53
TRAP1-212ENST00000575671 TIMELESSQ9UNS1 1208 aa18.34■□□□□ 0.53
TRAP1-212ENST00000575671 WDR7Q9Y4E6 1490 aa18.34■□□□□ 0.53
TRAP1-212ENST00000575671 ACIN1Q9UKV3 1341 aaKnown RBP18.34■□□□□ 0.53
TRAP1-212ENST00000575671 TONSLQ96HA7 1378 aa18.33■□□□□ 0.53
TRAP1-212ENST00000575671 FOXD1Q16676 465 aa18.33■□□□□ 0.52
TRAP1-212ENST00000575671 PLCH2O75038 1416 aa18.33■□□□□ 0.52
TRAP1-212ENST00000575671 ANKRD50Q9ULJ7 1429 aa18.33■□□□□ 0.52
TRAP1-212ENST00000575671 RSPH4AQ5TD94 716 aa18.31■□□□□ 0.52
TRAP1-212ENST00000575671 SLC4A1APQ9BWU0 796 aaKnown RBP18.31■□□□□ 0.52
TRAP1-212ENST00000575671 KIF15Q9NS87 1388 aa18.3■□□□□ 0.52
TRAP1-212ENST00000575671 EFCAB2Q5VUJ9 269 aa18.29■□□□□ 0.52
TRAP1-212ENST00000575671 PLEKHH2Q8IVE3 1493 aa18.29■□□□□ 0.52
TRAP1-212ENST00000575671 ASXL2Q76L83 1435 aa18.29■□□□□ 0.52
TRAP1-212ENST00000575671 NPM1P06748 294 aaKnown RBP eCLIP18.28■□□□□ 0.52
TRAP1-212ENST00000575671 KIAA1107Q9UPP5 1409 aa18.28■□□□□ 0.52
TRAP1-212ENST00000575671 RIMBP3CA6NJZ7 1639 aa18.27■□□□□ 0.52
TRAP1-212ENST00000575671 RIMBP3BA6NNM3 1639 aa18.27■□□□□ 0.52
TRAP1-212ENST00000575671 RIMBP3Q9UFD9 1639 aa18.27■□□□□ 0.52
TRAP1-212ENST00000575671 PPP1R15AO75807 674 aaPredicted RBP18.27■□□□□ 0.51
TRAP1-212ENST00000575671 ARHGEF12Q9NZN5 1544 aa18.26■□□□□ 0.51
TRAP1-212ENST00000575671 PZPP20742 1482 aa18.25■□□□□ 0.51
TRAP1-212ENST00000575671 ABCC1P33527 1531 aa18.23■□□□□ 0.51
TRAP1-212ENST00000575671 NUP155O75694 1391 aa18.22■□□□□ 0.51
TRAP1-212ENST00000575671 ANKRD30BQ9BXX2 1392 aa18.22■□□□□ 0.51
TRAP1-212ENST00000575671 MAST1Q9Y2H9 1570 aa18.22■□□□□ 0.51
TRAP1-212ENST00000575671 ABCA9Q8IUA7 1624 aa18.21■□□□□ 0.51
TRAP1-212ENST00000575671 ARAP3Q8WWN8 1544 aa18.21■□□□□ 0.51
TRAP1-212ENST00000575671 TRAPPC8Q9Y2L5 1435 aa18.19■□□□□ 0.5
TRAP1-212ENST00000575671 PKD2Q13563 968 aa18.19■□□□□ 0.5
TRAP1-212ENST00000575671 FANCAO15360 1455 aa18.19■□□□□ 0.5
TRAP1-212ENST00000575671 PLXNC1O60486 1568 aa18.17■□□□□ 0.5
TRAP1-212ENST00000575671 AFAP1Q8N556 730 aa18.15■□□□□ 0.5
TRAP1-212ENST00000575671 RPRD2Q5VT52 1461 aaKnown RBP18.15■□□□□ 0.5
TRAP1-212ENST00000575671 CYB5RLQ6IPT4 315 aa18.14■□□□□ 0.49
TRAP1-212ENST00000575671 SPAG9O60271 1321 aaKnown RBP18.14■□□□□ 0.49
TRAP1-212ENST00000575671 KDM5DQ9BY66 1539 aa18.13■□□□□ 0.49
TRAP1-212ENST00000575671 L3MBTL2Q969R5 705 aa18.13■□□□□ 0.49
TRAP1-212ENST00000575671 DUOX2Q9NRD8 1548 aa18.12■□□□□ 0.49
TRAP1-212ENST00000575671 ADGRL1O94910 1474 aa18.12■□□□□ 0.49
TRAP1-212ENST00000575671 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.11■□□□□ 0.491e-11■■□□□ 12.3
TRAP1-212ENST00000575671 HIRIP3Q9BW71 556 aaPredicted RBP18.1■□□□□ 0.49
TRAP1-212ENST00000575671 SCAPERQ9BY12 1400 aa18.1■□□□□ 0.49
TRAP1-212ENST00000575671 FAM135AQ9P2D6 1515 aa18.09■□□□□ 0.49
TRAP1-212ENST00000575671 MIER1Q8N108 512 aa18.09■□□□□ 0.49
TRAP1-212ENST00000575671 CD109Q6YHK3 1445 aa18.09■□□□□ 0.49
TRAP1-212ENST00000575671 ZFYVE16Q7Z3T8 1539 aa18.08■□□□□ 0.49
TRAP1-212ENST00000575671 CENPBP07199 599 aaPredicted RBP18.08■□□□□ 0.48
TRAP1-212ENST00000575671 MYT1LQ9UL68 1186 aa18.08■□□□□ 0.48
TRAP1-212ENST00000575671 ERBINQ96RT1 1412 aa18.08■□□□□ 0.48
TRAP1-212ENST00000575671 UNC13BO14795 1591 aa18.07■□□□□ 0.48
TRAP1-212ENST00000575671 TEX14Q8IWB6 1497 aa18.07■□□□□ 0.48
TRAP1-212ENST00000575671 RTEL1-TNFRSF6BF6WH68 1400 aa18.07■□□□□ 0.48
TRAP1-212ENST00000575671 ATP7AQ04656 1500 aa18.04■□□□□ 0.48
TRAP1-212ENST00000575671 GTF3C3Q9Y5Q9 886 aa18.03■□□□□ 0.48
TRAP1-212ENST00000575671 INO80Q9ULG1 1556 aaPredicted RBP18.02■□□□□ 0.48
TRAP1-212ENST00000575671 IQGAP3Q86VI3 1631 aa18.01■□□□□ 0.47
TRAP1-212ENST00000575671 CFAP74Q9C0B2 1584 aa18.01■□□□□ 0.47
TRAP1-212ENST00000575671 NBPF8Q3BBV2 869 aa17.99■□□□□ 0.47
TRAP1-212ENST00000575671 ZNF518AQ6AHZ1 1483 aa17.99■□□□□ 0.47
TRAP1-212ENST00000575671 MAGI2Q86UL8 1455 aa17.99■□□□□ 0.47
TRAP1-212ENST00000575671 DDX10Q13206 875 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms