RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 PREX2Q70Z35 1606 aa9.83□□□□□ -0.84
SMG6-217ENST00000575338 MYO5CQ9NQX4 1742 aa9.83□□□□□ -0.84
SMG6-217ENST00000575338 SHANK2Q9UPX8 1470 aa9.83□□□□□ -0.84
SMG6-217ENST00000575338 PTPRKQ15262 1439 aa9.82□□□□□ -0.84
SMG6-217ENST00000575338 CFDP1Q9UEE9 299 aaPredicted RBP9.82□□□□□ -0.84
SMG6-217ENST00000575338 ARHGEF5Q12774 1597 aa9.82□□□□□ -0.84
SMG6-217ENST00000575338 UHRF1BP1LA0JNW5 1464 aa9.81□□□□□ -0.84
SMG6-217ENST00000575338 ADGRL2O95490 1459 aa9.81□□□□□ -0.84
SMG6-217ENST00000575338 ABCC10Q5T3U5 1492 aa9.81□□□□□ -0.84
SMG6-217ENST00000575338 RSPH4AQ5TD94 716 aa9.8□□□□□ -0.84
SMG6-217ENST00000575338 PLEKHH2Q8IVE3 1493 aa9.79□□□□□ -0.84
SMG6-217ENST00000575338 CDC42BPBQ9Y5S2 1711 aa9.79□□□□□ -0.84
SMG6-217ENST00000575338 TONSLQ96HA7 1378 aa9.79□□□□□ -0.84
SMG6-217ENST00000575338 ANKRD30AQ9BXX3 1397 aa9.79□□□□□ -0.84
SMG6-217ENST00000575338 ARID3CA6NKF2 412 aa9.79□□□□□ -0.84
SMG6-217ENST00000575338 ABCC5O15440 1437 aa9.79□□□□□ -0.84
SMG6-217ENST00000575338 ZCCHC11Q5TAX3 1644 aaKnown RBP9.78□□□□□ -0.84
SMG6-217ENST00000575338 TSPY4P0CV99 314 aa9.75□□□□□ -0.85
SMG6-217ENST00000575338 TSPY10P0CW01 314 aa9.75□□□□□ -0.85
SMG6-217ENST00000575338 TRIM52Q96A61 297 aa9.75□□□□□ -0.85
SMG6-217ENST00000575338 RRP7BPQ9NSQ0 103 aa9.75□□□□□ -0.85
SMG6-217ENST00000575338 CHIC2Q9UKJ5 165 aa9.75□□□□□ -0.85
SMG6-217ENST00000575338 KDM5BQ9UGL1 1544 aa9.75□□□□□ -0.85
SMG6-217ENST00000575338 MAST1Q9Y2H9 1570 aa9.75□□□□□ -0.85
SMG6-217ENST00000575338 NCOA1Q15788 1441 aa9.74□□□□□ -0.85
SMG6-217ENST00000575338 CCDC141Q6ZP82 1450 aa9.74□□□□□ -0.85
SMG6-217ENST00000575338 ARAP3Q8WWN8 1544 aa9.74□□□□□ -0.85
SMG6-217ENST00000575338 ARHGAP5Q13017 1502 aa9.73□□□□□ -0.85
SMG6-217ENST00000575338 CENPBP07199 599 aaPredicted RBP9.73□□□□□ -0.85
SMG6-217ENST00000575338 NEUROD1Q13562 356 aa9.73□□□□□ -0.85
SMG6-217ENST00000575338 C9orf84Q5VXU9 1444 aa9.73□□□□□ -0.85
SMG6-217ENST00000575338 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.72□□□□□ -0.85
SMG6-217ENST00000575338 ERCC6L2Q5T890 1561 aa9.72□□□□□ -0.85
SMG6-217ENST00000575338 SAMD9LQ8IVG5 1584 aa9.72□□□□□ -0.85
SMG6-217ENST00000575338 KDM6BO15054 1643 aa9.72□□□□□ -0.85
SMG6-217ENST00000575338 ZNF777Q9ULD5 760 aaPredicted RBP9.72□□□□□ -0.85
SMG6-217ENST00000575338 KIAA1107Q9UPP5 1409 aa9.72□□□□□ -0.85
SMG6-217ENST00000575338 PLXNC1O60486 1568 aa9.71□□□□□ -0.85
SMG6-217ENST00000575338 TTC37Q6PGP7 1564 aa9.71□□□□□ -0.85
SMG6-217ENST00000575338 PPP1R15AO75807 674 aaPredicted RBP9.71□□□□□ -0.86
SMG6-217ENST00000575338 MPHOSPH9Q99550 1183 aa9.71□□□□□ -0.86
SMG6-217ENST00000575338 KDM5DQ9BY66 1539 aa9.71□□□□□ -0.86
SMG6-217ENST00000575338 ANKRD50Q9ULJ7 1429 aa9.7□□□□□ -0.86
SMG6-217ENST00000575338 SIN3AQ96ST3 1273 aa9.69□□□□□ -0.86
SMG6-217ENST00000575338 ZNF644Q9H582 1327 aaPredicted RBP9.69□□□□□ -0.86
SMG6-217ENST00000575338 RPRD2Q5VT52 1461 aaKnown RBP9.68□□□□□ -0.86
SMG6-217ENST00000575338 CFAP74Q9C0B2 1584 aa9.67□□□□□ -0.86
SMG6-217ENST00000575338 SYCP2Q9BX26 1530 aa9.67□□□□□ -0.86
SMG6-217ENST00000575338 MBD5Q9P267 1494 aa9.67□□□□□ -0.86
SMG6-217ENST00000575338 PLCH2O75038 1416 aa9.67□□□□□ -0.86
SMG6-217ENST00000575338 SLC4A1APQ9BWU0 796 aaKnown RBP9.67□□□□□ -0.86
SMG6-217ENST00000575338 ABCA9Q8IUA7 1624 aa9.67□□□□□ -0.86
SMG6-217ENST00000575338 UNC13BO14795 1591 aa9.66□□□□□ -0.86
SMG6-217ENST00000575338 WDR7Q9Y4E6 1490 aa9.66□□□□□ -0.86
SMG6-217ENST00000575338 POLR1AO95602 1720 aaPredicted RBP9.65□□□□□ -0.86
SMG6-217ENST00000575338 KIF15Q9NS87 1388 aa9.65□□□□□ -0.86
SMG6-217ENST00000575338 EFCAB2Q5VUJ9 269 aa9.65□□□□□ -0.86
SMG6-217ENST00000575338 OSCARQ8IYS5 282 aa9.65□□□□□ -0.86
SMG6-217ENST00000575338 ABCC1P33527 1531 aa9.65□□□□□ -0.86
SMG6-217ENST00000575338 DUOX2Q9NRD8 1548 aa9.65□□□□□ -0.86
SMG6-217ENST00000575338 DENND4BO75064 1496 aaPredicted RBP9.65□□□□□ -0.87
SMG6-217ENST00000575338 PZPP20742 1482 aa9.65□□□□□ -0.87
SMG6-217ENST00000575338 ANKRD30BQ9BXX2 1392 aa9.64□□□□□ -0.87
SMG6-217ENST00000575338 ERBINQ96RT1 1412 aa9.64□□□□□ -0.87
SMG6-217ENST00000575338 IQGAP3Q86VI3 1631 aa9.63□□□□□ -0.87
SMG6-217ENST00000575338 NPM1P06748 294 aaKnown RBP eCLIP9.62□□□□□ -0.87
SMG6-217ENST00000575338 RTEL1-TNFRSF6BF6WH68 1400 aa9.62□□□□□ -0.87
SMG6-217ENST00000575338 ARHGEF12Q9NZN5 1544 aa9.61□□□□□ -0.87
SMG6-217ENST00000575338 HNRNPMP52272 730 aaKnown RBP eCLIP9.61□□□□□ -0.87
SMG6-217ENST00000575338 NUP155O75694 1391 aa9.61□□□□□ -0.87
SMG6-217ENST00000575338 FAM135AQ9P2D6 1515 aa9.6□□□□□ -0.87
SMG6-217ENST00000575338 EIF2AK4Q9P2K8 1649 aaKnown RBP9.6□□□□□ -0.87
SMG6-217ENST00000575338 TEX14Q8IWB6 1497 aa9.59□□□□□ -0.87
SMG6-217ENST00000575338 MIER1Q8N108 512 aa9.59□□□□□ -0.87
SMG6-217ENST00000575338 KCNH8Q96L42 1107 aa9.59□□□□□ -0.87
SMG6-217ENST00000575338 EIF4G2P78344 907 aaKnown RBP eCLIP9.58□□□□□ -0.88
SMG6-217ENST00000575338 FANCAO15360 1455 aa9.58□□□□□ -0.88
SMG6-217ENST00000575338 MAGI2Q86UL8 1455 aa9.58□□□□□ -0.88
SMG6-217ENST00000575338 PKD2Q13563 968 aa9.57□□□□□ -0.88
SMG6-217ENST00000575338 INO80Q9ULG1 1556 aaPredicted RBP9.57□□□□□ -0.88
SMG6-217ENST00000575338 ASXL2Q76L83 1435 aa9.56□□□□□ -0.88
SMG6-217ENST00000575338 DEPDC5O75140 1603 aa9.56□□□□□ -0.88
SMG6-217ENST00000575338 ATP7AQ04656 1500 aa9.56□□□□□ -0.88
SMG6-217ENST00000575338 ZFYVE16Q7Z3T8 1539 aa9.56□□□□□ -0.88
SMG6-217ENST00000575338 L3MBTL2Q969R5 705 aa9.55□□□□□ -0.88
SMG6-217ENST00000575338 SPAG9O60271 1321 aaKnown RBP9.55□□□□□ -0.88
SMG6-217ENST00000575338 ADGRL1O94910 1474 aa9.54□□□□□ -0.88
SMG6-217ENST00000575338 ANP32CO43423 234 aa9.54□□□□□ -0.88
SMG6-217ENST00000575338 CCDC144AA2RUR9 1427 aa9.54□□□□□ -0.88
SMG6-217ENST00000575338 ATP10AO60312 1499 aa9.53□□□□□ -0.88
SMG6-217ENST00000575338 ZNF518AQ6AHZ1 1483 aa9.53□□□□□ -0.88
SMG6-217ENST00000575338 RIMBP3CA6NJZ7 1639 aa9.53□□□□□ -0.88
SMG6-217ENST00000575338 RIMBP3BA6NNM3 1639 aa9.53□□□□□ -0.88
SMG6-217ENST00000575338 RIMBP3Q9UFD9 1639 aa9.53□□□□□ -0.88
SMG6-217ENST00000575338 KANK1Q14678 1352 aa9.53□□□□□ -0.88
SMG6-217ENST00000575338 TET3O43151 1660 aa9.53□□□□□ -0.88
SMG6-217ENST00000575338 UHRF1BP1Q6BDS2 1440 aa9.53□□□□□ -0.88
SMG6-217ENST00000575338 FOXD1Q16676 465 aa9.52□□□□□ -0.89
SMG6-217ENST00000575338 SPHKAPQ2M3C7 1700 aa9.52□□□□□ -0.89
SMG6-217ENST00000575338 CEP152O94986 1710 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms