RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 GSE1Q14687 1217 aa10.74□□□□□ -0.69
TOM1L1-220ENST00000575333 RSPH4AQ5TD94 716 aa10.74□□□□□ -0.69
TOM1L1-220ENST00000575333 BRPF3Q9ULD4 1205 aa10.74□□□□□ -0.69
TOM1L1-220ENST00000575333 CIZ1Q9ULV3 898 aaPredicted RBP10.74□□□□□ -0.69
TOM1L1-220ENST00000575333 TOP2AP11388 1531 aaKnown RBP10.71□□□□□ -0.69
TOM1L1-220ENST00000575333 PIP4P2Q8N4L2 257 aa10.71□□□□□ -0.69
TOM1L1-220ENST00000575333 ECM2O94769 699 aaPredicted RBP10.7□□□□□ -0.7
TOM1L1-220ENST00000575333 NCLP19338 710 aaKnown RBP10.7□□□□□ -0.7
TOM1L1-220ENST00000575333 RASEFQ8IZ41 740 aa10.69□□□□□ -0.7
TOM1L1-220ENST00000575333 FARP1Q9Y4F1 1045 aaPredicted RBP10.69□□□□□ -0.7
TOM1L1-220ENST00000575333 BRD2P25440 801 aaKnown RBP10.66□□□□□ -0.7
TOM1L1-220ENST00000575333 NPM1P06748 294 aaKnown RBP eCLIP10.65□□□□□ -0.7
TOM1L1-220ENST00000575333 DCAF8Q5TAQ9 597 aa10.65□□□□□ -0.7
TOM1L1-220ENST00000575333 IPO4Q8TEX9 1081 aaKnown RBP10.63□□□□□ -0.71
TOM1L1-220ENST00000575333 NAP1L5Q96NT1 182 aaPredicted RBP10.63□□□□□ -0.71
TOM1L1-220ENST00000575333 PRDM4Q9UKN5 801 aa10.63□□□□□ -0.71
TOM1L1-220ENST00000575333 RGL2O15211 777 aa10.63□□□□□ -0.71
TOM1L1-220ENST00000575333 FAM212AQ96EL1 285 aa10.63□□□□□ -0.71
TOM1L1-220ENST00000575333 NAP1L2Q9ULW6 460 aaPredicted RBP10.63□□□□□ -0.71
TOM1L1-220ENST00000575333 HOMEZQ8IX15 550 aa10.62□□□□□ -0.71
TOM1L1-220ENST00000575333 PDCL3Q9H2J4 239 aa10.62□□□□□ -0.71
TOM1L1-220ENST00000575333 CCDC88BA6NC98 1476 aa10.6□□□□□ -0.71
TOM1L1-220ENST00000575333 NESP48681 1621 aa10.59□□□□□ -0.71
TOM1L1-220ENST00000575333 CNGB1Q14028 1251 aaPredicted RBP10.58□□□□□ -0.72
TOM1L1-220ENST00000575333 PNNQ9H307 717 aaKnown RBP10.58□□□□□ -0.72
TOM1L1-220ENST00000575333 CANXP27824 592 aaKnown RBP10.58□□□□□ -0.72
TOM1L1-220ENST00000575333 TPM2P07951 284 aa10.57□□□□□ -0.72
TOM1L1-220ENST00000575333 TSPYL2Q9H2G4 693 aaPredicted RBP10.57□□□□□ -0.72
TOM1L1-220ENST00000575333 BBXQ8WY36 941 aaPredicted RBP10.56□□□□□ -0.72
TOM1L1-220ENST00000575333 KCNH8Q96L42 1107 aa10.56□□□□□ -0.72
TOM1L1-220ENST00000575333 DDRGK1Q96HY6 314 aa10.56□□□□□ -0.72
TOM1L1-220ENST00000575333 LAMC3Q9Y6N6 1575 aa10.55□□□□□ -0.72
TOM1L1-220ENST00000575333 CLCN1P35523 988 aa10.55□□□□□ -0.72
TOM1L1-220ENST00000575333 MAP7D2Q96T17 732 aa10.55□□□□□ -0.72
TOM1L1-220ENST00000575333 CADPSQ9ULU8 1353 aa10.55□□□□□ -0.72
TOM1L1-220ENST00000575333 RNF25Q96BH1 459 aaPredicted RBP10.54□□□□□ -0.72
TOM1L1-220ENST00000575333 L1TD1Q5T7N2 865 aaKnown RBP10.54□□□□□ -0.72
TOM1L1-220ENST00000575333 FRAT1Q92837 279 aaPredicted RBP10.54□□□□□ -0.72
TOM1L1-220ENST00000575333 PYGBP11216 843 aa10.53□□□□□ -0.72
TOM1L1-220ENST00000575333 ARID4BQ4LE39 1312 aaPredicted RBP10.53□□□□□ -0.72
TOM1L1-220ENST00000575333 GTF2E1P29083 439 aaPredicted RBP10.52□□□□□ -0.73
TOM1L1-220ENST00000575333 DHX57Q6P158 1386 aaKnown RBP10.52□□□□□ -0.73
TOM1L1-220ENST00000575333 CEP162Q5TB80 1403 aa10.52□□□□□ -0.73
TOM1L1-220ENST00000575333 ANP32CO43423 234 aa10.51□□□□□ -0.73
TOM1L1-220ENST00000575333 PAXIP1Q6ZW49 1069 aaPredicted RBP10.51□□□□□ -0.73
TOM1L1-220ENST00000575333 SMAP1Q8IYB5 467 aaPredicted RBP10.51□□□□□ -0.73
TOM1L1-220ENST00000575333 ERCC6Q03468 1493 aa10.51□□□□□ -0.73
TOM1L1-220ENST00000575333 TRIM52Q96A61 297 aa10.51□□□□□ -0.73
TOM1L1-220ENST00000575333 CFTRP13569 1480 aa10.5□□□□□ -0.73
TOM1L1-220ENST00000575333 LAS1LQ9Y4W2 734 aaKnown RBP10.49□□□□□ -0.73
TOM1L1-220ENST00000575333 VGFO15240 615 aaPredicted RBP10.49□□□□□ -0.73
TOM1L1-220ENST00000575333 STAC3Q96MF2 364 aa10.49□□□□□ -0.73
TOM1L1-220ENST00000575333 RRAGDQ9NQL2 400 aaPredicted RBP10.49□□□□□ -0.73
TOM1L1-220ENST00000575333 PDS5BQ9NTI5 1447 aa10.48□□□□□ -0.73
TOM1L1-220ENST00000575333 TEX2Q8IWB9 1127 aa10.48□□□□□ -0.73
TOM1L1-220ENST00000575333 KIF21AQ7Z4S6 1674 aa10.48□□□□□ -0.73
TOM1L1-220ENST00000575333 RGS3P49796 1198 aa10.47□□□□□ -0.73
TOM1L1-220ENST00000575333 NFKBIBQ15653 356 aa10.47□□□□□ -0.73
TOM1L1-220ENST00000575333 UTP14CQ5TAP6 766 aaKnown RBP10.47□□□□□ -0.73
TOM1L1-220ENST00000575333 BCCIPQ9P287 314 aaKnown RBP eCLIP10.47□□□□□ -0.73
TOM1L1-220ENST00000575333 TNIKQ9UKE5 1360 aa10.47□□□□□ -0.73
TOM1L1-220ENST00000575333 CHRM1P11229 460 aaPredicted RBP10.47□□□□□ -0.73
TOM1L1-220ENST00000575333 FTSJ3Q8IY81 847 aaKnown RBP10.47□□□□□ -0.73
TOM1L1-220ENST00000575333 CCDC61Q9Y6R9 512 aa10.47□□□□□ -0.73
TOM1L1-220ENST00000575333 CHMP4BQ9H444 224 aaKnown RBP10.46□□□□□ -0.74
TOM1L1-220ENST00000575333 PRDM2Q13029 1718 aa10.46□□□□□ -0.74
TOM1L1-220ENST00000575333 MTERF4Q7Z6M4 381 aaKnown RBP10.45□□□□□ -0.74
TOM1L1-220ENST00000575333 PPP1R15AO75807 674 aaPredicted RBP10.44□□□□□ -0.74
TOM1L1-220ENST00000575333 B4GALNT3Q6L9W6 998 aa10.44□□□□□ -0.74
TOM1L1-220ENST00000575333 FANCD2Q9BXW9 1451 aa10.44□□□□□ -0.74
TOM1L1-220ENST00000575333 TCERG1O14776 1098 aaKnown RBP10.44□□□□□ -0.74
TOM1L1-220ENST00000575333 CHMP4AQ9BY43 222 aa10.44□□□□□ -0.74
TOM1L1-220ENST00000575333 RIOK3O14730 519 aaKnown RBP10.43□□□□□ -0.74
TOM1L1-220ENST00000575333 MS4A1P11836 297 aa10.43□□□□□ -0.74
TOM1L1-220ENST00000575333 CD44P16070 742 aaKnown RBP10.43□□□□□ -0.74
TOM1L1-220ENST00000575333 DCAF11Q8TEB1 546 aa10.43□□□□□ -0.74
TOM1L1-220ENST00000575333 CEP164Q9UPV0 1460 aa10.42□□□□□ -0.74
TOM1L1-220ENST00000575333 CHGAP10645 457 aaKnown RBP10.42□□□□□ -0.74
TOM1L1-220ENST00000575333 IRX6P78412 446 aaPredicted RBP10.42□□□□□ -0.74
TOM1L1-220ENST00000575333 TERF1P54274 439 aa10.41□□□□□ -0.74
TOM1L1-220ENST00000575333 ANP32BQ92688 251 aaKnown RBP10.41□□□□□ -0.74
TOM1L1-220ENST00000575333 CUX2O14529 1486 aa10.41□□□□□ -0.74
TOM1L1-220ENST00000575333 TNNT2P45379 298 aaPredicted RBP10.4□□□□□ -0.74
TOM1L1-220ENST00000575333 TAF3Q5VWG9 929 aa10.4□□□□□ -0.74
TOM1L1-220ENST00000575333 ZRANB1Q9UGI0 708 aa10.4□□□□□ -0.74
TOM1L1-220ENST00000575333 HNRNPUQ00839 825 aaKnown RBP eCLIP10.4□□□□□ -0.75
TOM1L1-220ENST00000575333 THOC2Q8NI27 1593 aaKnown RBP10.38□□□□□ -0.75
TOM1L1-220ENST00000575333 MRC2Q9UBG0 1479 aa10.37□□□□□ -0.75
TOM1L1-220ENST00000575333 C19orf67A6NJJ6 358 aa10.37□□□□□ -0.75
TOM1L1-220ENST00000575333 HSP90B1P14625 803 aaKnown RBP10.37□□□□□ -0.75
TOM1L1-220ENST00000575333 DDX10Q13206 875 aaKnown RBP10.37□□□□□ -0.75
TOM1L1-220ENST00000575333 NPM2Q86SE8 214 aaKnown RBP10.37□□□□□ -0.75
TOM1L1-220ENST00000575333 PCDHB8Q9UN66 801 aa10.37□□□□□ -0.75
TOM1L1-220ENST00000575333 PCDHB13Q9Y5F0 798 aa10.37□□□□□ -0.75
TOM1L1-220ENST00000575333 KIF20AO95235 890 aa10.36□□□□□ -0.75
TOM1L1-220ENST00000575333 ZFP91Q96JP5 570 aaPredicted RBP10.36□□□□□ -0.75
TOM1L1-220ENST00000575333 PHF12Q96QT6 1004 aa10.36□□□□□ -0.75
TOM1L1-220ENST00000575333 MAP3K13O43283 966 aa10.35□□□□□ -0.75
TOM1L1-220ENST00000575333 KIF12Q96FN5 646 aa10.35□□□□□ -0.75
TOM1L1-220ENST00000575333 ZBED9Q6R2W3 1325 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms