RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 MYO5CQ9NQX4 1742 aa34.73■■■■□ 3.15
SPNS3-203ENST00000575185 MLECQ14165 292 aa34.73■■■■□ 3.15
SPNS3-203ENST00000575185 PLCH2O75038 1416 aa34.72■■■■□ 3.15
SPNS3-203ENST00000575185 KIF14Q15058 1648 aa34.68■■■■□ 3.14
SPNS3-203ENST00000575185 EHMT2Q96KQ7 1210 aa34.66■■■■□ 3.14
SPNS3-203ENST00000575185 ARHGEF12Q9NZN5 1544 aa34.64■■■■□ 3.14
SPNS3-203ENST00000575185 ATP1B4Q9UN42 357 aaPredicted RBP34.61■■■■□ 3.13
SPNS3-203ENST00000575185 ATP10AO60312 1499 aa34.6■■■■□ 3.13
SPNS3-203ENST00000575185 C9orf84Q5VXU9 1444 aa34.6■■■■□ 3.13
SPNS3-203ENST00000575185 LRRIQ1Q96JM4 1722 aa34.6■■■■□ 3.13
SPNS3-203ENST00000575185 ARHGAP35Q9NRY4 1499 aa34.59■■■■□ 3.13
SPNS3-203ENST00000575185 PREX1Q8TCU6 1659 aa34.59■■■■□ 3.13
SPNS3-203ENST00000575185 FMN1Q68DA7 1419 aa34.58■■■■□ 3.13
SPNS3-203ENST00000575185 UBTFP17480 764 aaKnown RBP34.52■■■■□ 3.12
SPNS3-203ENST00000575185 EFCAB2Q5VUJ9 269 aa34.52■■■■□ 3.12
SPNS3-203ENST00000575185 ARHGAP5Q13017 1502 aa34.51■■■■□ 3.12
SPNS3-203ENST00000575185 KDM5CP41229 1560 aa34.51■■■■□ 3.12
SPNS3-203ENST00000575185 ZNF518AQ6AHZ1 1483 aa34.5■■■■□ 3.11
SPNS3-203ENST00000575185 TROQ12816 1431 aaPredicted RBP34.48■■■■□ 3.11
SPNS3-203ENST00000575185 CEBPAP49715 358 aaPredicted RBP34.48■■■■□ 3.11
SPNS3-203ENST00000575185 CERKQ8TCT0 537 aa34.48■■■■□ 3.11
SPNS3-203ENST00000575185 DIP2CQ9Y2E4 1556 aa34.47■■■■□ 3.11
SPNS3-203ENST00000575185 CDC42BPBQ9Y5S2 1711 aa34.47■■■■□ 3.11
SPNS3-203ENST00000575185 STRCQ7RTU9 1775 aa34.44■■■■□ 3.1
SPNS3-203ENST00000575185 CDK11AQ9UQ88 783 aaPredicted RBP34.44■■■■□ 3.1
SPNS3-203ENST00000575185 ABCA6Q8N139 1617 aa34.44■■■■□ 3.1
SPNS3-203ENST00000575185 AFAP1Q8N556 730 aa34.43■■■■□ 3.1
SPNS3-203ENST00000575185 CLIP1P30622 1438 aa34.39■■■■□ 3.1
SPNS3-203ENST00000575185 PREX2Q70Z35 1606 aa34.37■■■■□ 3.09
SPNS3-203ENST00000575185 REREQ9P2R6 1566 aa34.36■■■■□ 3.09
SPNS3-203ENST00000575185 C3P01024 1663 aa34.36■■■■□ 3.09
SPNS3-203ENST00000575185 ITSN2Q9NZM3 1697 aa34.34■■■■□ 3.09
SPNS3-203ENST00000575185 MYT1LQ9UL68 1186 aa34.33■■■■□ 3.09
SPNS3-203ENST00000575185 ABCC1P33527 1531 aa34.33■■■■□ 3.09
SPNS3-203ENST00000575185 UHRF1BP1Q6BDS2 1440 aa34.32■■■■□ 3.08
SPNS3-203ENST00000575185 SETD1BQ9UPS6 1966 aaKnown RBP34.29■■■■□ 3.08
SPNS3-203ENST00000575185 MLH3Q9UHC1 1453 aa34.29■■■■□ 3.08
SPNS3-203ENST00000575185 TRAPPC8Q9Y2L5 1435 aa34.29■■■■□ 3.08
SPNS3-203ENST00000575185 CDC42BPAQ5VT25 1732 aa34.27■■■■□ 3.08
SPNS3-203ENST00000575185 KIDINS220Q9ULH0 1771 aa34.25■■■■□ 3.07
SPNS3-203ENST00000575185 AGLP35573 1532 aa34.23■■■■□ 3.07
SPNS3-203ENST00000575185 CCDC18Q5T9S5 1454 aa34.2■■■■□ 3.07
SPNS3-203ENST00000575185 CASKIN1Q8WXD9 1431 aa34.19■■■■□ 3.06
SPNS3-203ENST00000575185 CHIC1Q5VXU3 224 aa34.17■■■■□ 3.06
SPNS3-203ENST00000575185 DMRT2Q9Y5R5 561 aa34.17■■■■□ 3.06
SPNS3-203ENST00000575185 SAMD9LQ8IVG5 1584 aa34.11■■■■□ 3.05
SPNS3-203ENST00000575185 PTPRTO14522 1441 aa34.1■■■■□ 3.05
SPNS3-203ENST00000575185 ESF1Q9H501 851 aaKnown RBP34.09■■■■□ 3.05
SPNS3-203ENST00000575185 SYCP2Q9BX26 1530 aa34.08■■■■□ 3.05
SPNS3-203ENST00000575185 FYCO1Q9BQS8 1478 aa34.06■■■■□ 3.04
SPNS3-203ENST00000575185 MROH2AA6NES4 1674 aa34.06■■■■□ 3.04
SPNS3-203ENST00000575185 LTBP4Q8N2S1 1624 aa34.05■■■■□ 3.04
SPNS3-203ENST00000575185 SUPT6HQ7KZ85 1726 aaKnown RBP34.05■■■■□ 3.04
SPNS3-203ENST00000575185 CNTLNQ9NXG0 1405 aa34.04■■■■□ 3.04
SPNS3-203ENST00000575185 NCOA1Q15788 1441 aa34.03■■■■□ 3.04
SPNS3-203ENST00000575185 DISP3Q9P2K9 1392 aa34.02■■■■□ 3.04
SPNS3-203ENST00000575185 ZNF777Q9ULD5 760 aaPredicted RBP34.01■■■■□ 3.03
SPNS3-203ENST00000575185 GPATCH8Q9UKJ3 1502 aaKnown RBP33.99■■■■□ 3.03
SPNS3-203ENST00000575185 CAMSAP1Q5T5Y3 1602 aa33.98■■■■□ 3.03
SPNS3-203ENST00000575185 ILDR2Q71H61 639 aa33.98■■■■□ 3.03
SPNS3-203ENST00000575185 CLTCQ00610 1675 aaKnown RBP33.97■■■■□ 3.03
SPNS3-203ENST00000575185 INO80Q9ULG1 1556 aaPredicted RBP33.96■■■■□ 3.03
SPNS3-203ENST00000575185 ATP7AQ04656 1500 aa33.95■■■■□ 3.03
SPNS3-203ENST00000575185 PLXNC1O60486 1568 aa33.94■■■■□ 3.02
SPNS3-203ENST00000575185 NPATQ14207 1427 aa33.93■■■■□ 3.02
SPNS3-203ENST00000575185 SPATA31D1Q6ZQQ2 1576 aa33.93■■■■□ 3.02
SPNS3-203ENST00000575185 HNRNPMP52272 730 aaKnown RBP eCLIP33.92■■■■□ 3.02
SPNS3-203ENST00000575185 SPAG9O60271 1321 aaKnown RBP33.92■■■■□ 3.02
SPNS3-203ENST00000575185 MYO3AQ8NEV4 1616 aa33.91■■■■□ 3.02
SPNS3-203ENST00000575185 ZMYM3Q14202 1370 aa33.89■■■■□ 3.02
SPNS3-203ENST00000575185 ZNF142P52746 1687 aaPredicted RBP33.89■■■■□ 3.02
SPNS3-203ENST00000575185 IQSEC2Q5JU85 1478 aa33.87■■■■□ 3.01
SPNS3-203ENST00000575185 A2MP01023 1474 aa33.84■■■■□ 3.01
SPNS3-203ENST00000575185 KIAA1107Q9UPP5 1409 aa33.82■■■■□ 3
SPNS3-203ENST00000575185 NCKAP5LQ9HCH0 1330 aa33.81■■■■□ 3
SPNS3-203ENST00000575185 PLEKHH2Q8IVE3 1493 aa33.81■■■■□ 3
SPNS3-203ENST00000575185 CEP170BQ9Y4F5 1589 aaPredicted RBP33.81■■■■□ 3
SPNS3-203ENST00000575185 CFDP1Q9UEE9 299 aaPredicted RBP33.79■■■■□ 3
SPNS3-203ENST00000575185 ADGBQ8N7X0 1667 aa33.79■■■■□ 3
SPNS3-203ENST00000575185 CCNB3Q8WWL7 1395 aa33.78■■■■□ 3
SPNS3-203ENST00000575185 PTPRKQ15262 1439 aa33.78■■■■□ 3
SPNS3-203ENST00000575185 ZNF335Q9H4Z2 1342 aaPredicted RBP33.77■■■■□ 3
SPNS3-203ENST00000575185 SOCS7O14512 581 aa33.75■■■□□ 2.99
SPNS3-203ENST00000575185 TIAM1Q13009 1591 aa33.75■■■□□ 2.99
SPNS3-203ENST00000575185 PLA2R1Q13018 1463 aa33.74■■■□□ 2.99
SPNS3-203ENST00000575185 GGT6Q6P531 493 aa33.73■■■□□ 2.99
SPNS3-203ENST00000575185 TCOF1Q13428 1488 aaKnown RBP33.71■■■□□ 2.99
SPNS3-203ENST00000575185 MTUS2Q5JR59 1369 aa33.71■■■□□ 2.99
SPNS3-203ENST00000575185 ZNF644Q9H582 1327 aaPredicted RBP33.69■■■□□ 2.98
SPNS3-203ENST00000575185 EHBP1L1Q8N3D4 1523 aa33.64■■■□□ 2.98
SPNS3-203ENST00000575185 MBD5Q9P267 1494 aa33.64■■■□□ 2.98
SPNS3-203ENST00000575185 PKD2Q13563 968 aa33.63■■■□□ 2.97
SPNS3-203ENST00000575185 DNMT1P26358 1616 aaKnown RBP33.63■■■□□ 2.97
SPNS3-203ENST00000575185 UBAP1LF5GYI3 381 aa33.6■■■□□ 2.97
SPNS3-203ENST00000575185 POLR1AO95602 1720 aaPredicted RBP33.59■■■□□ 2.97
SPNS3-203ENST00000575185 A2ML1A8K2U0 1454 aa33.59■■■□□ 2.97
SPNS3-203ENST00000575185 PPP6R1Q9UPN7 881 aa33.54■■■□□ 2.96
SPNS3-203ENST00000575185 RTEL1-TNFRSF6BF6WH68 1400 aa33.53■■■□□ 2.96
SPNS3-203ENST00000575185 NEURL4Q96JN8 1562 aa33.53■■■□□ 2.96
SPNS3-203ENST00000575185 CEP162Q5TB80 1403 aa33.53■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms