RNA–Protein interactions for RNA: ENST00000574744.1

TOM1L1-219, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-219ENST00000574744 UACAQ9BZF9 1416 aa13.96□□□□□ -0.18
TOM1L1-219ENST00000574744 PTPN23Q9H3S7 1636 aa13.95□□□□□ -0.18
TOM1L1-219ENST00000574744 C1QBPQ07021 282 aaKnown RBP13.95□□□□□ -0.18
TOM1L1-219ENST00000574744 UHRF1BP1LA0JNW5 1464 aa13.94□□□□□ -0.18
TOM1L1-219ENST00000574744 CCER1Q8TC90 406 aaPredicted RBP13.94□□□□□ -0.18
TOM1L1-219ENST00000574744 ABCC2Q92887 1545 aa13.94□□□□□ -0.18
TOM1L1-219ENST00000574744 ATP10BO94823 1461 aa13.93□□□□□ -0.18
TOM1L1-219ENST00000574744 CLSPNQ9HAW4 1339 aa13.93□□□□□ -0.18
TOM1L1-219ENST00000574744 ITSN2Q9NZM3 1697 aa13.93□□□□□ -0.18
TOM1L1-219ENST00000574744 KIF14Q15058 1648 aa13.9□□□□□ -0.18
TOM1L1-219ENST00000574744 ERCC6L2Q5T890 1561 aa13.9□□□□□ -0.18
TOM1L1-219ENST00000574744 AKNAQ7Z591 1439 aa13.9□□□□□ -0.19
TOM1L1-219ENST00000574744 FAM50AQ14320 339 aaKnown RBP13.89□□□□□ -0.19
TOM1L1-219ENST00000574744 SETD5Q9C0A6 1442 aa13.89□□□□□ -0.19
TOM1L1-219ENST00000574744 ABCC10Q5T3U5 1492 aa13.87□□□□□ -0.19
TOM1L1-219ENST00000574744 PLEKHD1A6NEE1 506 aa13.86□□□□□ -0.19
TOM1L1-219ENST00000574744 KDM5BQ9UGL1 1544 aa13.85□□□□□ -0.19
TOM1L1-219ENST00000574744 HFM1A2PYH4 1435 aa13.85□□□□□ -0.19
TOM1L1-219ENST00000574744 SPINK5Q9NQ38 1064 aaPredicted RBP13.85□□□□□ -0.19
TOM1L1-219ENST00000574744 GPATCH8Q9UKJ3 1502 aaKnown RBP13.85□□□□□ -0.19
TOM1L1-219ENST00000574744 OSCARQ8IYS5 282 aa13.84□□□□□ -0.19
TOM1L1-219ENST00000574744 ACIN1Q9UKV3 1341 aaKnown RBP13.84□□□□□ -0.19
TOM1L1-219ENST00000574744 DHX57Q6P158 1386 aaKnown RBP13.83□□□□□ -0.19
TOM1L1-219ENST00000574744 RAB3GAP2Q9H2M9 1393 aa13.83□□□□□ -0.2
TOM1L1-219ENST00000574744 DNMT1P26358 1616 aaKnown RBP13.82□□□□□ -0.2
TOM1L1-219ENST00000574744 CDC42BPAQ5VT25 1732 aa13.81□□□□□ -0.2
TOM1L1-219ENST00000574744 ARID3CA6NKF2 412 aa13.81□□□□□ -0.2
TOM1L1-219ENST00000574744 GCC2Q8IWJ2 1684 aa13.81□□□□□ -0.2
TOM1L1-219ENST00000574744 ROCK1Q13464 1354 aa13.81□□□□□ -0.2
TOM1L1-219ENST00000574744 PTPRKQ15262 1439 aa13.81□□□□□ -0.2
TOM1L1-219ENST00000574744 ZCCHC11Q5TAX3 1644 aaKnown RBP13.8□□□□□ -0.2
TOM1L1-219ENST00000574744 ITGAEP38570 1179 aa13.79□□□□□ -0.2
TOM1L1-219ENST00000574744 CAMSAP2Q08AD1 1489 aa13.79□□□□□ -0.2
TOM1L1-219ENST00000574744 PREX2Q70Z35 1606 aa13.79□□□□□ -0.2
TOM1L1-219ENST00000574744 DAPK1P53355 1430 aa13.78□□□□□ -0.2
TOM1L1-219ENST00000574744 NAIPQ13075 1403 aa13.78□□□□□ -0.2
TOM1L1-219ENST00000574744 SHANK2Q9UPX8 1470 aa13.76□□□□□ -0.21
TOM1L1-219ENST00000574744 CFDP1Q9UEE9 299 aaPredicted RBP13.76□□□□□ -0.21
TOM1L1-219ENST00000574744 CROCC2H7BZ55 1655 aa13.75□□□□□ -0.21
TOM1L1-219ENST00000574744 ABCC5O15440 1437 aa13.75□□□□□ -0.21
TOM1L1-219ENST00000574744 ARHGEF5Q12774 1597 aa13.75□□□□□ -0.21
TOM1L1-219ENST00000574744 ARAP3Q8WWN8 1544 aa13.74□□□□□ -0.21
TOM1L1-219ENST00000574744 ADGRL2O95490 1459 aa13.74□□□□□ -0.21
TOM1L1-219ENST00000574744 ZNF219Q9P2Y4 722 aaPredicted RBP13.74□□□□□ -0.21
TOM1L1-219ENST00000574744 ADGBQ8N7X0 1667 aa13.74□□□□□ -0.21
TOM1L1-219ENST00000574744 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.73□□□□□ -0.21
TOM1L1-219ENST00000574744 MYO5CQ9NQX4 1742 aa13.73□□□□□ -0.21
TOM1L1-219ENST00000574744 CDC42BPBQ9Y5S2 1711 aa13.72□□□□□ -0.21
TOM1L1-219ENST00000574744 PLEKHH2Q8IVE3 1493 aa13.72□□□□□ -0.21
TOM1L1-219ENST00000574744 TTC37Q6PGP7 1564 aa13.71□□□□□ -0.21
TOM1L1-219ENST00000574744 CAPN15O75808 1086 aa13.71□□□□□ -0.21
TOM1L1-219ENST00000574744 TRHP20396 242 aaPredicted RBP13.71□□□□□ -0.21
TOM1L1-219ENST00000574744 MAPKBP1O60336 1514 aa13.7□□□□□ -0.22
TOM1L1-219ENST00000574744 RSPH4AQ5TD94 716 aa13.7□□□□□ -0.22
TOM1L1-219ENST00000574744 WDR7Q9Y4E6 1490 aa13.69□□□□□ -0.22
TOM1L1-219ENST00000574744 KIAA1107Q9UPP5 1409 aa13.69□□□□□ -0.22
TOM1L1-219ENST00000574744 SAMD9LQ8IVG5 1584 aa13.68□□□□□ -0.22
TOM1L1-219ENST00000574744 PLCH2O75038 1416 aa13.67□□□□□ -0.22
TOM1L1-219ENST00000574744 MBD5Q9P267 1494 aa13.67□□□□□ -0.22
TOM1L1-219ENST00000574744 MAST1Q9Y2H9 1570 aa13.66□□□□□ -0.22
TOM1L1-219ENST00000574744 ZNF644Q9H582 1327 aaPredicted RBP13.66□□□□□ -0.22
TOM1L1-219ENST00000574744 CCDC141Q6ZP82 1450 aa13.66□□□□□ -0.22
TOM1L1-219ENST00000574744 NCOA1Q15788 1441 aa13.65□□□□□ -0.22
TOM1L1-219ENST00000574744 ARHGAP5Q13017 1502 aa13.65□□□□□ -0.22
TOM1L1-219ENST00000574744 ABCA9Q8IUA7 1624 aa13.65□□□□□ -0.22
TOM1L1-219ENST00000574744 TIMELESSQ9UNS1 1208 aa13.65□□□□□ -0.22
TOM1L1-219ENST00000574744 ANKRD30AQ9BXX3 1397 aa13.65□□□□□ -0.22
TOM1L1-219ENST00000574744 C9orf84Q5VXU9 1444 aa13.63□□□□□ -0.23
TOM1L1-219ENST00000574744 RRP7BPQ9NSQ0 103 aa13.61□□□□□ -0.23
TOM1L1-219ENST00000574744 ASXL2Q76L83 1435 aa13.61□□□□□ -0.23
TOM1L1-219ENST00000574744 ABCC1P33527 1531 aa13.6□□□□□ -0.23
TOM1L1-219ENST00000574744 TSPY4P0CV99 314 aa13.6□□□□□ -0.23
TOM1L1-219ENST00000574744 TSPY10P0CW01 314 aa13.6□□□□□ -0.23
TOM1L1-219ENST00000574744 EFCAB2Q5VUJ9 269 aa13.6□□□□□ -0.23
TOM1L1-219ENST00000574744 CHIC2Q9UKJ5 165 aa13.6□□□□□ -0.23
TOM1L1-219ENST00000574744 ZNF777Q9ULD5 760 aaPredicted RBP13.6□□□□□ -0.23
TOM1L1-219ENST00000574744 KDM6BO15054 1643 aa13.6□□□□□ -0.23
TOM1L1-219ENST00000574744 SYCP2Q9BX26 1530 aa13.59□□□□□ -0.23
TOM1L1-219ENST00000574744 PLXNC1O60486 1568 aa13.59□□□□□ -0.23
TOM1L1-219ENST00000574744 NPM1P06748 294 aaKnown RBP eCLIP13.59□□□□□ -0.23
TOM1L1-219ENST00000574744 CACNB1Q02641 598 aaPredicted RBP13.59□□□□□ -0.23
TOM1L1-219ENST00000574744 POLA2Q14181 598 aa13.57□□□□□ -0.24
TOM1L1-219ENST00000574744 KDM5DQ9BY66 1539 aa13.57□□□□□ -0.24
TOM1L1-219ENST00000574744 ANKRD50Q9ULJ7 1429 aa13.56□□□□□ -0.24
TOM1L1-219ENST00000574744 KCNH8Q96L42 1107 aa13.56□□□□□ -0.24
TOM1L1-219ENST00000574744 CFAP74Q9C0B2 1584 aa13.56□□□□□ -0.24
TOM1L1-219ENST00000574744 RIMBP3CA6NJZ7 1639 aa13.55□□□□□ -0.24
TOM1L1-219ENST00000574744 RIMBP3BA6NNM3 1639 aa13.55□□□□□ -0.24
TOM1L1-219ENST00000574744 RIMBP3Q9UFD9 1639 aa13.55□□□□□ -0.24
TOM1L1-219ENST00000574744 KIF15Q9NS87 1388 aa13.54□□□□□ -0.24
TOM1L1-219ENST00000574744 RTEL1-TNFRSF6BF6WH68 1400 aa13.54□□□□□ -0.24
TOM1L1-219ENST00000574744 HNRNPMP52272 730 aaKnown RBP eCLIP13.53□□□□□ -0.24
TOM1L1-219ENST00000574744 DENND4BO75064 1496 aaPredicted RBP13.53□□□□□ -0.24
TOM1L1-219ENST00000574744 ARHGEF12Q9NZN5 1544 aa13.53□□□□□ -0.24
TOM1L1-219ENST00000574744 FANCAO15360 1455 aa13.52□□□□□ -0.25
TOM1L1-219ENST00000574744 DUOX2Q9NRD8 1548 aa13.51□□□□□ -0.25
TOM1L1-219ENST00000574744 PZPP20742 1482 aa13.51□□□□□ -0.25
TOM1L1-219ENST00000574744 DSG3P32926 999 aa13.51□□□□□ -0.25
TOM1L1-219ENST00000574744 MPHOSPH9Q99550 1183 aa13.51□□□□□ -0.25
TOM1L1-219ENST00000574744 ERBINQ96RT1 1412 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms