RNA–Protein interactions for RNA: ENST00000574671.5

ACTG1-207, Transcript of actin gamma 1, humanhuman

TSL 1 (best)

Gene ACTG1, Length 1,678 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1-207ENST00000574671 NAIPQ13075 1403 aa17.76■□□□□ 0.43
ACTG1-207ENST00000574671 PLEKHD1A6NEE1 506 aa17.75■□□□□ 0.43
ACTG1-207ENST00000574671 MIA2Q96PC5 1412 aa17.75■□□□□ 0.43
ACTG1-207ENST00000574671 ANP32CO43423 234 aa17.73■□□□□ 0.43
ACTG1-207ENST00000574671 SIN3AQ96ST3 1273 aa17.72■□□□□ 0.43
ACTG1-207ENST00000574671 KDM5BQ9UGL1 1544 aa17.72■□□□□ 0.43
ACTG1-207ENST00000574671 TROQ12816 1431 aaPredicted RBP17.71■□□□□ 0.43
ACTG1-207ENST00000574671 ADCY10Q96PN6 1610 aa17.68■□□□□ 0.42
ACTG1-207ENST00000574671 DDX10Q13206 875 aaKnown RBP17.67■□□□□ 0.42
ACTG1-207ENST00000574671 RIMBP3CA6NJZ7 1639 aa17.67■□□□□ 0.42
ACTG1-207ENST00000574671 RIMBP3BA6NNM3 1639 aa17.67■□□□□ 0.42
ACTG1-207ENST00000574671 RIMBP3Q9UFD9 1639 aa17.67■□□□□ 0.42
ACTG1-207ENST00000574671 PTPRKQ15262 1439 aa17.66■□□□□ 0.42
ACTG1-207ENST00000574671 ZCCHC11Q5TAX3 1644 aaKnown RBP17.65■□□□□ 0.42
ACTG1-207ENST00000574671 NPM1P06748 294 aaKnown RBP eCLIP17.64■□□□□ 0.41
ACTG1-207ENST00000574671 NEFLP07196 543 aa17.64■□□□□ 0.41
ACTG1-207ENST00000574671 CYB5RLQ6IPT4 315 aa17.63■□□□□ 0.41
ACTG1-207ENST00000574671 ROCK1Q13464 1354 aa17.62■□□□□ 0.41
ACTG1-207ENST00000574671 KIF14Q15058 1648 aa17.58■□□□□ 0.41
ACTG1-207ENST00000574671 ABCC10Q5T3U5 1492 aa17.57■□□□□ 0.4
ACTG1-207ENST00000574671 GPATCH8Q9UKJ3 1502 aaKnown RBP17.55■□□□□ 0.4
ACTG1-207ENST00000574671 KCNH8Q96L42 1107 aa17.55■□□□□ 0.4
ACTG1-207ENST00000574671 WDR7Q9Y4E6 1490 aa17.54■□□□□ 0.4
ACTG1-207ENST00000574671 ERICH6BQ5W0A0 696 aa17.54■□□□□ 0.4
ACTG1-207ENST00000574671 TSHZ2Q9NRE2 1034 aa17.54■□□□□ 0.4
ACTG1-207ENST00000574671 ASXL2Q76L83 1435 aa17.53■□□□□ 0.4
ACTG1-207ENST00000574671 CFDP1Q9UEE9 299 aaPredicted RBP17.52■□□□□ 0.4
ACTG1-207ENST00000574671 DNMT1P26358 1616 aaKnown RBP17.52■□□□□ 0.39
ACTG1-207ENST00000574671 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.51■□□□□ 0.391e-12■□□□□ 9
ACTG1-207ENST00000574671 ITSN2Q9NZM3 1697 aa17.5■□□□□ 0.39
ACTG1-207ENST00000574671 POLR1AO95602 1720 aaPredicted RBP17.49■□□□□ 0.39
ACTG1-207ENST00000574671 EIF4G2P78344 907 aaKnown RBP eCLIP17.48■□□□□ 0.39
ACTG1-207ENST00000574671 FKBP8Q14318 412 aa17.47■□□□□ 0.39
ACTG1-207ENST00000574671 CDC42BPAQ5VT25 1732 aa17.47■□□□□ 0.39
ACTG1-207ENST00000574671 RPRD2Q5VT52 1461 aaKnown RBP17.47■□□□□ 0.39
ACTG1-207ENST00000574671 DENND4BO75064 1496 aaPredicted RBP17.46■□□□□ 0.39
ACTG1-207ENST00000574671 DAPK1P53355 1430 aa17.46■□□□□ 0.38
ACTG1-207ENST00000574671 CNTLNQ9NXG0 1405 aa17.46■□□□□ 0.38
ACTG1-207ENST00000574671 TTC37Q6PGP7 1564 aa17.45■□□□□ 0.38
ACTG1-207ENST00000574671 PLCH2O75038 1416 aa17.44■□□□□ 0.38
ACTG1-207ENST00000574671 ZNF644Q9H582 1327 aaPredicted RBP17.44■□□□□ 0.38
ACTG1-207ENST00000574671 MPHOSPH9Q99550 1183 aa17.44■□□□□ 0.38
ACTG1-207ENST00000574671 NCOA1Q15788 1441 aa17.43■□□□□ 0.38
ACTG1-207ENST00000574671 ZNF777Q9ULD5 760 aaPredicted RBP17.42■□□□□ 0.38
ACTG1-207ENST00000574671 PREX2Q70Z35 1606 aa17.42■□□□□ 0.38
ACTG1-207ENST00000574671 CDC42BPBQ9Y5S2 1711 aa17.42■□□□□ 0.38
ACTG1-207ENST00000574671 ADGBQ8N7X0 1667 aa17.42■□□□□ 0.38
ACTG1-207ENST00000574671 ANKRD30BQ9BXX2 1392 aa17.41■□□□□ 0.38
ACTG1-207ENST00000574671 CAMSAP2Q08AD1 1489 aa17.41■□□□□ 0.38
ACTG1-207ENST00000574671 ABCA9Q8IUA7 1624 aa17.41■□□□□ 0.38
ACTG1-207ENST00000574671 MYO5CQ9NQX4 1742 aa17.41■□□□□ 0.38
ACTG1-207ENST00000574671 DNAJC5Q9H3Z4 198 aa17.4■□□□□ 0.38
ACTG1-207ENST00000574671 HSPA5P11021 654 aaKnown RBP17.39■□□□□ 0.37
ACTG1-207ENST00000574671 EFCAB2Q5VUJ9 269 aa17.39■□□□□ 0.37
ACTG1-207ENST00000574671 TRIM52Q96A61 297 aa17.39■□□□□ 0.37
ACTG1-207ENST00000574671 ARAP3Q8WWN8 1544 aa17.39■□□□□ 0.37
ACTG1-207ENST00000574671 RRP7BPQ9NSQ0 103 aa17.39■□□□□ 0.37
ACTG1-207ENST00000574671 ADGRL2O95490 1459 aa17.38■□□□□ 0.37
ACTG1-207ENST00000574671 TEX14Q8IWB6 1497 aa17.38■□□□□ 0.37
ACTG1-207ENST00000574671 WASHC2AQ641Q2 1341 aa17.38■□□□□ 0.37
ACTG1-207ENST00000574671 ABCC5O15440 1437 aa17.38■□□□□ 0.37
ACTG1-207ENST00000574671 ARHGAP5Q13017 1502 aa17.38■□□□□ 0.37
ACTG1-207ENST00000574671 KDM6BO15054 1643 aa17.38■□□□□ 0.37
ACTG1-207ENST00000574671 RSPH4AQ5TD94 716 aa17.37■□□□□ 0.37
ACTG1-207ENST00000574671 ARID4BQ4LE39 1312 aaPredicted RBP17.37■□□□□ 0.37
ACTG1-207ENST00000574671 CCDC7Q96M83 1385 aa17.36■□□□□ 0.37
ACTG1-207ENST00000574671 ANP32EQ9BTT0 268 aa17.36■□□□□ 0.37
ACTG1-207ENST00000574671 SAMD9LQ8IVG5 1584 aa17.34■□□□□ 0.37
ACTG1-207ENST00000574671 KIAA1107Q9UPP5 1409 aa17.34■□□□□ 0.37
ACTG1-207ENST00000574671 PLEKHH2Q8IVE3 1493 aa17.34■□□□□ 0.37
ACTG1-207ENST00000574671 CROCC2H7BZ55 1655 aa17.34■□□□□ 0.37
ACTG1-207ENST00000574671 CD109Q6YHK3 1445 aa17.33■□□□□ 0.37
ACTG1-207ENST00000574671 SPATA31E1Q6ZUB1 1445 aa17.33■□□□□ 0.37
ACTG1-207ENST00000574671 HNRNPMP52272 730 aaKnown RBP eCLIP17.33■□□□□ 0.37
ACTG1-207ENST00000574671 HIRIP3Q9BW71 556 aaPredicted RBP17.33■□□□□ 0.37
ACTG1-207ENST00000574671 L3MBTL2Q969R5 705 aa17.32■□□□□ 0.36
ACTG1-207ENST00000574671 MBD5Q9P267 1494 aa17.32■□□□□ 0.36
ACTG1-207ENST00000574671 GLI2P10070 1586 aa17.32■□□□□ 0.36
ACTG1-207ENST00000574671 CHIC2Q9UKJ5 165 aa17.31■□□□□ 0.36
ACTG1-207ENST00000574671 ARHGEF5Q12774 1597 aa17.31■□□□□ 0.36
ACTG1-207ENST00000574671 SHANK2Q9UPX8 1470 aa17.3■□□□□ 0.36
ACTG1-207ENST00000574671 TSPY4P0CV99 314 aa17.3■□□□□ 0.36
ACTG1-207ENST00000574671 TSPY10P0CW01 314 aa17.3■□□□□ 0.36
ACTG1-207ENST00000574671 FANCAO15360 1455 aa17.3■□□□□ 0.36
ACTG1-207ENST00000574671 HNRNPUQ00839 825 aaKnown RBP eCLIP17.29■□□□□ 0.36
ACTG1-207ENST00000574671 FAM69CQ0P6D2 419 aa17.29■□□□□ 0.36
ACTG1-207ENST00000574671 PRKRIP1Q9H875 184 aaPredicted RBP17.28■□□□□ 0.36
ACTG1-207ENST00000574671 ZBED9Q6R2W3 1325 aa17.28■□□□□ 0.36
ACTG1-207ENST00000574671 PZPP20742 1482 aa17.27■□□□□ 0.35
ACTG1-207ENST00000574671 CCDC141Q6ZP82 1450 aa17.27■□□□□ 0.35
ACTG1-207ENST00000574671 DIP2BQ9P265 1576 aa17.26■□□□□ 0.35
ACTG1-207ENST00000574671 SYCP2Q9BX26 1530 aa17.26■□□□□ 0.35
ACTG1-207ENST00000574671 ARHGEF12Q9NZN5 1544 aa17.26■□□□□ 0.35
ACTG1-207ENST00000574671 ROCK2O75116 1388 aaKnown RBP17.26■□□□□ 0.35
ACTG1-207ENST00000574671 ANKRD30AQ9BXX3 1397 aa17.26■□□□□ 0.35
ACTG1-207ENST00000574671 ABCC1P33527 1531 aa17.25■□□□□ 0.35
ACTG1-207ENST00000574671 SLC4A1APQ9BWU0 796 aaKnown RBP17.25■□□□□ 0.35
ACTG1-207ENST00000574671 MAP3K4Q9Y6R4 1608 aa17.25■□□□□ 0.35
ACTG1-207ENST00000574671 KDM5DQ9BY66 1539 aa17.25■□□□□ 0.35
ACTG1-207ENST00000574671 BCANQ96GW7 911 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms