RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 ATP10BO94823 1461 aa22.99■■□□□ 1.27
USP43-204ENST00000573955 UACAQ9BZF9 1416 aa22.99■■□□□ 1.27
USP43-204ENST00000573955 TRIM52Q96A61 297 aa22.98■■□□□ 1.27
USP43-204ENST00000573955 CLASP1Q7Z460 1538 aa22.96■■□□□ 1.27
USP43-204ENST00000573955 SHROOM2Q13796 1616 aa22.96■■□□□ 1.27
USP43-204ENST00000573955 DAPK1P53355 1430 aa22.96■■□□□ 1.27
USP43-204ENST00000573955 KDM6BO15054 1643 aa22.95■■□□□ 1.27
USP43-204ENST00000573955 ABCC5O15440 1437 aa22.93■■□□□ 1.26
USP43-204ENST00000573955 GPATCH8Q9UKJ3 1502 aaKnown RBP22.93■■□□□ 1.26
USP43-204ENST00000573955 GCC2Q8IWJ2 1684 aa22.91■■□□□ 1.26
USP43-204ENST00000573955 CAMSAP2Q08AD1 1489 aa22.91■■□□□ 1.26
USP43-204ENST00000573955 KCNH8Q96L42 1107 aa22.91■■□□□ 1.26
USP43-204ENST00000573955 MIER1Q8N108 512 aa22.9■■□□□ 1.26
USP43-204ENST00000573955 DNMT1P26358 1616 aaKnown RBP22.89■■□□□ 1.26
USP43-204ENST00000573955 OSCARQ8IYS5 282 aa22.89■■□□□ 1.26
USP43-204ENST00000573955 ADCY10Q96PN6 1610 aa22.89■■□□□ 1.25
USP43-204ENST00000573955 ITSN2Q9NZM3 1697 aa22.87■■□□□ 1.25
USP43-204ENST00000573955 AKNAQ7Z591 1439 aa22.86■■□□□ 1.25
USP43-204ENST00000573955 TONSLQ96HA7 1378 aa22.84■■□□□ 1.25
USP43-204ENST00000573955 FOXD1Q16676 465 aa22.83■■□□□ 1.25
USP43-204ENST00000573955 SLC24A1O60721 1099 aa22.82■■□□□ 1.24
USP43-204ENST00000573955 ABCC10Q5T3U5 1492 aa22.81■■□□□ 1.24
USP43-204ENST00000573955 ROCK1Q13464 1354 aa22.81■■□□□ 1.24
USP43-204ENST00000573955 CDC42BPAQ5VT25 1732 aa22.81■■□□□ 1.24
USP43-204ENST00000573955 MPHOSPH9Q99550 1183 aa22.8■■□□□ 1.24
USP43-204ENST00000573955 PPP1R15AO75807 674 aaPredicted RBP22.79■■□□□ 1.24
USP43-204ENST00000573955 DENND4BO75064 1496 aaPredicted RBP22.79■■□□□ 1.24
USP43-204ENST00000573955 TIMELESSQ9UNS1 1208 aa22.78■■□□□ 1.24
USP43-204ENST00000573955 YTHDC1Q96MU7 727 aaKnown RBP22.77■■□□□ 1.24
USP43-204ENST00000573955 HIRIP3Q9BW71 556 aaPredicted RBP22.77■■□□□ 1.24
USP43-204ENST00000573955 ABCC2Q92887 1545 aa22.75■■□□□ 1.23
USP43-204ENST00000573955 HNRNPMP52272 730 aaKnown RBP eCLIP22.75■■□□□ 1.23
USP43-204ENST00000573955 NCOA1Q15788 1441 aa22.73■■□□□ 1.23
USP43-204ENST00000573955 SLC4A1APQ9BWU0 796 aaKnown RBP22.71■■□□□ 1.23
USP43-204ENST00000573955 CROCC2H7BZ55 1655 aa22.69■■□□□ 1.22
USP43-204ENST00000573955 ANKRD30AQ9BXX3 1397 aa22.68■■□□□ 1.22
USP43-204ENST00000573955 ADGBQ8N7X0 1667 aa22.68■■□□□ 1.22
USP43-204ENST00000573955 ZCCHC11Q5TAX3 1644 aaKnown RBP22.67■■□□□ 1.22
USP43-204ENST00000573955 TSPY4P0CV99 314 aa22.66■■□□□ 1.22
USP43-204ENST00000573955 TSPY10P0CW01 314 aa22.66■■□□□ 1.22
USP43-204ENST00000573955 C9orf84Q5VXU9 1444 aa22.66■■□□□ 1.22
USP43-204ENST00000573955 TTC37Q6PGP7 1564 aa22.65■■□□□ 1.22
USP43-204ENST00000573955 CDC42BPBQ9Y5S2 1711 aa22.64■■□□□ 1.21
USP43-204ENST00000573955 ADGRL2O95490 1459 aa22.64■■□□□ 1.21
USP43-204ENST00000573955 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.62■■□□□ 1.21
USP43-204ENST00000573955 SAMD9LQ8IVG5 1584 aa22.62■■□□□ 1.21
USP43-204ENST00000573955 ARHGAP5Q13017 1502 aa22.62■■□□□ 1.21
USP43-204ENST00000573955 PREX2Q70Z35 1606 aa22.61■■□□□ 1.21
USP43-204ENST00000573955 ANKRD50Q9ULJ7 1429 aa22.61■■□□□ 1.21
USP43-204ENST00000573955 KDM5BQ9UGL1 1544 aa22.6■■□□□ 1.21
USP43-204ENST00000573955 DDX10Q13206 875 aaKnown RBP22.59■■□□□ 1.21
USP43-204ENST00000573955 MBD5Q9P267 1494 aa22.58■■□□□ 1.21
USP43-204ENST00000573955 ANKRD30BQ9BXX2 1392 aa22.58■■□□□ 1.21
USP43-204ENST00000573955 CYB5RLQ6IPT4 315 aa22.58■■□□□ 1.21
USP43-204ENST00000573955 PZPP20742 1482 aa22.58■■□□□ 1.21
USP43-204ENST00000573955 L3MBTL2Q969R5 705 aa22.57■■□□□ 1.2
USP43-204ENST00000573955 SHANK2Q9UPX8 1470 aa22.56■■□□□ 1.2
USP43-204ENST00000573955 KIF15Q9NS87 1388 aa22.56■■□□□ 1.2
USP43-204ENST00000573955 SYCP2Q9BX26 1530 aa22.56■■□□□ 1.2
USP43-204ENST00000573955 PKD2Q13563 968 aa22.54■■□□□ 1.2
USP43-204ENST00000573955 CCDC141Q6ZP82 1450 aa22.54■■□□□ 1.2
USP43-204ENST00000573955 UHRF1BP1LA0JNW5 1464 aa22.54■■□□□ 1.2
USP43-204ENST00000573955 ARHGEF5Q12774 1597 aa22.53■■□□□ 1.2
USP43-204ENST00000573955 NUP155O75694 1391 aa22.52■■□□□ 1.2
USP43-204ENST00000573955 MYO5CQ9NQX4 1742 aa22.51■■□□□ 1.19
USP43-204ENST00000573955 RPRD2Q5VT52 1461 aaKnown RBP22.5■■□□□ 1.19
USP43-204ENST00000573955 NPM1P06748 294 aaKnown RBP eCLIP22.47■■□□□ 1.19
USP43-204ENST00000573955 ASXL2Q76L83 1435 aa22.47■■□□□ 1.19
USP43-204ENST00000573955 KIAA1107Q9UPP5 1409 aa22.46■■□□□ 1.19
USP43-204ENST00000573955 TSHZ2Q9NRE2 1034 aa22.45■■□□□ 1.19
USP43-204ENST00000573955 RSPH4AQ5TD94 716 aa22.45■■□□□ 1.18
USP43-204ENST00000573955 PLCH2O75038 1416 aa22.44■■□□□ 1.18
USP43-204ENST00000573955 WDR7Q9Y4E6 1490 aa22.44■■□□□ 1.18
USP43-204ENST00000573955 ARHGEF12Q9NZN5 1544 aa22.44■■□□□ 1.18
USP43-204ENST00000573955 EFCAB2Q5VUJ9 269 aa22.43■■□□□ 1.18
USP43-204ENST00000573955 NBPF8Q3BBV2 869 aa22.43■■□□□ 1.18
USP43-204ENST00000573955 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.42■■□□□ 1.18
USP43-204ENST00000573955 TEX14Q8IWB6 1497 aa22.42■■□□□ 1.18
USP43-204ENST00000573955 HSPA5P11021 654 aaKnown RBP22.42■■□□□ 1.18
USP43-204ENST00000573955 AFAP1Q8N556 730 aa22.41■■□□□ 1.18
USP43-204ENST00000573955 ZNF326Q5BKZ1 582 aaKnown RBP22.4■■□□□ 1.18
USP43-204ENST00000573955 PLEKHH2Q8IVE3 1493 aa22.38■■□□□ 1.17
USP43-204ENST00000573955 EIF4G2P78344 907 aaKnown RBP eCLIP22.36■■□□□ 1.17
USP43-204ENST00000573955 TRAPPC8Q9Y2L5 1435 aa22.36■■□□□ 1.17
USP43-204ENST00000573955 MYT1LQ9UL68 1186 aa22.35■■□□□ 1.17
USP43-204ENST00000573955 MAST1Q9Y2H9 1570 aa22.33■■□□□ 1.16
USP43-204ENST00000573955 RIMBP3CA6NJZ7 1639 aa22.32■■□□□ 1.16
USP43-204ENST00000573955 RIMBP3BA6NNM3 1639 aa22.32■■□□□ 1.16
USP43-204ENST00000573955 RIMBP3Q9UFD9 1639 aa22.32■■□□□ 1.16
USP43-204ENST00000573955 ABCC1P33527 1531 aa22.32■■□□□ 1.16
USP43-204ENST00000573955 KDM5DQ9BY66 1539 aa22.32■■□□□ 1.16
USP43-204ENST00000573955 FAM135AQ9P2D6 1515 aa22.31■■□□□ 1.16
USP43-204ENST00000573955 WASHC2AQ641Q2 1341 aa22.28■■□□□ 1.16
USP43-204ENST00000573955 FANCAO15360 1455 aa22.28■■□□□ 1.16
USP43-204ENST00000573955 SPAG9O60271 1321 aaKnown RBP22.28■■□□□ 1.16
USP43-204ENST00000573955 KDM2AQ9Y2K7 1162 aa22.27■■□□□ 1.16
USP43-204ENST00000573955 PLXNC1O60486 1568 aa22.27■■□□□ 1.16
USP43-204ENST00000573955 ANP32CO43423 234 aa22.26■■□□□ 1.15
USP43-204ENST00000573955 SUPT16HQ9Y5B9 1047 aaKnown RBP22.25■■□□□ 1.15
USP43-204ENST00000573955 DUOX2Q9NRD8 1548 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms