RNA–Protein interactions for RNA: ENST00000573539.5

TRPV3-206, Transcript of transient receptor potential cation channel subfamily V member 3, humanhuman

TSL 1 (best)

Gene TRPV3, Length 2,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV3-206ENST00000573539 AKNAQ7Z591 1439 aa17.33■□□□□ 0.37
TRPV3-206ENST00000573539 FAM9BQ8IZU0 186 aa17.31■□□□□ 0.36
TRPV3-206ENST00000573539 ZNF608Q9ULD9 1512 aaPredicted RBP17.31■□□□□ 0.36
TRPV3-206ENST00000573539 SLC4A1APQ9BWU0 796 aaKnown RBP17.31■□□□□ 0.36
TRPV3-206ENST00000573539 DAPK1P53355 1430 aa17.3■□□□□ 0.36
TRPV3-206ENST00000573539 CNTLNQ9NXG0 1405 aa17.3■□□□□ 0.36
TRPV3-206ENST00000573539 ANKRD30BQ9BXX2 1392 aa17.3■□□□□ 0.36
TRPV3-206ENST00000573539 ABCC5O15440 1437 aa17.29■□□□□ 0.36
TRPV3-206ENST00000573539 CCDC7Q96M83 1385 aa17.29■□□□□ 0.36
TRPV3-206ENST00000573539 CNGB1Q14028 1251 aaPredicted RBP17.29■□□□□ 0.36
TRPV3-206ENST00000573539 PRKRIP1Q9H875 184 aaPredicted RBP17.28■□□□□ 0.36
TRPV3-206ENST00000573539 NCOA1Q15788 1441 aa17.27■□□□□ 0.36
TRPV3-206ENST00000573539 MRS2Q9HD23 443 aa17.26■□□□□ 0.35
TRPV3-206ENST00000573539 NUP153P49790 1475 aaKnown RBP17.25■□□□□ 0.35
TRPV3-206ENST00000573539 RPRD2Q5VT52 1461 aaKnown RBP17.25■□□□□ 0.35
TRPV3-206ENST00000573539 DISP1Q96F81 1524 aa17.25■□□□□ 0.35
TRPV3-206ENST00000573539 TEX14Q8IWB6 1497 aa17.24■□□□□ 0.35
TRPV3-206ENST00000573539 KIF7Q2M1P5 1343 aa17.24■□□□□ 0.35
TRPV3-206ENST00000573539 ZNF777Q9ULD5 760 aaPredicted RBP17.24■□□□□ 0.35
TRPV3-206ENST00000573539 MRC2Q9UBG0 1479 aa17.23■□□□□ 0.35
TRPV3-206ENST00000573539 ROCK1Q13464 1354 aa17.23■□□□□ 0.35
TRPV3-206ENST00000573539 ZNF326Q5BKZ1 582 aaKnown RBP17.22■□□□□ 0.35
TRPV3-206ENST00000573539 PRG4Q92954 1404 aaPredicted RBP17.22■□□□□ 0.35
TRPV3-206ENST00000573539 DNMT1P26358 1616 aaKnown RBP17.21■□□□□ 0.35
TRPV3-206ENST00000573539 KIAA0556O60303 1618 aa17.21■□□□□ 0.35
TRPV3-206ENST00000573539 POLR3GLQ9BT43 218 aa17.2■□□□□ 0.34
TRPV3-206ENST00000573539 KIAA0586Q9BVV6 1533 aa17.2■□□□□ 0.34
TRPV3-206ENST00000573539 CFDP1Q9UEE9 299 aaPredicted RBP17.2■□□□□ 0.34
TRPV3-206ENST00000573539 SPATA31E1Q6ZUB1 1445 aa17.19■□□□□ 0.34
TRPV3-206ENST00000573539 CDK11AQ9UQ88 783 aaPredicted RBP17.19■□□□□ 0.34
TRPV3-206ENST00000573539 SENP3-EIF4A1A0A087X0R7 540 aa17.18■□□□□ 0.34
TRPV3-206ENST00000573539 MSH5O43196 834 aa17.17■□□□□ 0.34
TRPV3-206ENST00000573539 RAPGEF6Q8TEU7 1601 aa17.17■□□□□ 0.34
TRPV3-206ENST00000573539 FBLN2P98095 1184 aa17.16■□□□□ 0.34
TRPV3-206ENST00000573539 PZPP20742 1482 aa17.16■□□□□ 0.34
TRPV3-206ENST00000573539 PLB1Q6P1J6 1458 aa17.15■□□□□ 0.34
TRPV3-206ENST00000573539 IFT140Q96RY7 1462 aa17.14■□□□□ 0.34
TRPV3-206ENST00000573539 CAMSAP2Q08AD1 1489 aa17.14■□□□□ 0.33
TRPV3-206ENST00000573539 GRIN2AQ12879 1464 aa17.14■□□□□ 0.33
TRPV3-206ENST00000573539 PKD2Q13563 968 aa17.13■□□□□ 0.33
TRPV3-206ENST00000573539 B4GALNT3Q6L9W6 998 aa17.13■□□□□ 0.33
TRPV3-206ENST00000573539 ZBED9Q6R2W3 1325 aa17.13■□□□□ 0.33
TRPV3-206ENST00000573539 TROQ12816 1431 aaPredicted RBP17.11■□□□□ 0.33
TRPV3-206ENST00000573539 PPP4R2Q9NY27 417 aa17.11■□□□□ 0.33
TRPV3-206ENST00000573539 CHMP7Q8WUX9 453 aaPredicted RBP17.11■□□□□ 0.33
TRPV3-206ENST00000573539 GPATCH8Q9UKJ3 1502 aaKnown RBP17.1■□□□□ 0.33
TRPV3-206ENST00000573539 KIF14Q15058 1648 aa17.1■□□□□ 0.33
TRPV3-206ENST00000573539 USP47Q96K76 1375 aa17.09■□□□□ 0.33
TRPV3-206ENST00000573539 EIF4G3O43432 1585 aaKnown RBP17.08■□□□□ 0.32
TRPV3-206ENST00000573539 DHX29Q7Z478 1369 aaKnown RBP17.07■□□□□ 0.32
TRPV3-206ENST00000573539 KIAA1107Q9UPP5 1409 aa17.07■□□□□ 0.32
TRPV3-206ENST00000573539 BCORL1Q5H9F3 1711 aa17.06■□□□□ 0.32
TRPV3-206ENST00000573539 MBD5Q9P267 1494 aa17.05■□□□□ 0.32
TRPV3-206ENST00000573539 POLR1AO95602 1720 aaPredicted RBP17.04■□□□□ 0.32
TRPV3-206ENST00000573539 KDM2AQ9Y2K7 1162 aa17.04■□□□□ 0.32
TRPV3-206ENST00000573539 ERICH6BQ5W0A0 696 aa17.04■□□□□ 0.32
TRPV3-206ENST00000573539 ANKRD50Q9ULJ7 1429 aa17.03■□□□□ 0.32
TRPV3-206ENST00000573539 ANKRD30AQ9BXX3 1397 aa17.03■□□□□ 0.32
TRPV3-206ENST00000573539 CEP170Q5SW79 1584 aa17.03■□□□□ 0.32
TRPV3-206ENST00000573539 JPH4Q96JJ6 628 aa17.03■□□□□ 0.32
TRPV3-206ENST00000573539 NUP155O75694 1391 aa17.02■□□□□ 0.32
TRPV3-206ENST00000573539 FANCIQ9NVI1 1328 aa17.01■□□□□ 0.31
TRPV3-206ENST00000573539 ADGBQ8N7X0 1667 aa17.01■□□□□ 0.31
TRPV3-206ENST00000573539 ITSN2Q9NZM3 1697 aa17.01■□□□□ 0.31
TRPV3-206ENST00000573539 CARD11Q9BXL7 1154 aa17■□□□□ 0.31
TRPV3-206ENST00000573539 ADGRL2O95490 1459 aa16.99■□□□□ 0.31
TRPV3-206ENST00000573539 PLEKHD1A6NEE1 506 aa16.99■□□□□ 0.31
TRPV3-206ENST00000573539 HNRNPMP52272 730 aaKnown RBP eCLIP16.98■□□□□ 0.31
TRPV3-206ENST00000573539 CROCC2H7BZ55 1655 aa16.97■□□□□ 0.31
TRPV3-206ENST00000573539 ST20-MTHFSA0A0A6YYL1 179 aa16.97■□□□□ 0.31
TRPV3-206ENST00000573539 KDM5CP41229 1560 aa16.97■□□□□ 0.31
TRPV3-206ENST00000573539 DCAF11Q8TEB1 546 aa16.96■□□□□ 0.31
TRPV3-206ENST00000573539 SYNJ2O15056 1496 aa16.96■□□□□ 0.31
TRPV3-206ENST00000573539 ERCC6Q03468 1493 aa16.96■□□□□ 0.31
TRPV3-206ENST00000573539 C9orf84Q5VXU9 1444 aa16.95■□□□□ 0.3
TRPV3-206ENST00000573539 CARMIL2Q6F5E8 1435 aa16.95■□□□□ 0.3
TRPV3-206ENST00000573539 MAGI1Q96QZ7 1491 aaPredicted RBP16.95■□□□□ 0.3
TRPV3-206ENST00000573539 TMC1Q8TDI8 760 aa16.95■□□□□ 0.3
TRPV3-206ENST00000573539 PNISRQ8TF01 805 aaKnown RBP16.95■□□□□ 0.3
TRPV3-206ENST00000573539 SMG6Q86US8 1419 aaKnown RBP16.94■□□□□ 0.3
TRPV3-206ENST00000573539 ADCY10Q96PN6 1610 aa16.94■□□□□ 0.3
TRPV3-206ENST00000573539 NUDCQ9Y266 331 aa16.94■□□□□ 0.3
TRPV3-206ENST00000573539 TSPY4P0CV99 314 aa16.94■□□□□ 0.3
TRPV3-206ENST00000573539 TSPY10P0CW01 314 aa16.94■□□□□ 0.3
TRPV3-206ENST00000573539 CDC42BPAQ5VT25 1732 aa16.93■□□□□ 0.3
TRPV3-206ENST00000573539 ERICH6Q7L0X2 663 aa16.93■□□□□ 0.3
TRPV3-206ENST00000573539 ATP10BO94823 1461 aa16.92■□□□□ 0.3
TRPV3-206ENST00000573539 KIF15Q9NS87 1388 aa16.91■□□□□ 0.3
TRPV3-206ENST00000573539 ABCC10Q5T3U5 1492 aa16.91■□□□□ 0.3
TRPV3-206ENST00000573539 RALGAPBQ86X10 1494 aa16.91■□□□□ 0.3
TRPV3-206ENST00000573539 UHRF1BP1Q6BDS2 1440 aa16.9■□□□□ 0.3
TRPV3-206ENST00000573539 SALL2Q9Y467 1007 aaPredicted RBP16.89■□□□□ 0.29
TRPV3-206ENST00000573539 ARID4BQ4LE39 1312 aaPredicted RBP16.89■□□□□ 0.29
TRPV3-206ENST00000573539 NUP160Q12769 1436 aa16.89■□□□□ 0.29
TRPV3-206ENST00000573539 RGL3Q3MIN7 710 aa16.88■□□□□ 0.29
TRPV3-206ENST00000573539 CCDC136Q96JN2 1154 aa16.88■□□□□ 0.29
TRPV3-206ENST00000573539 ROCK2O75116 1388 aaKnown RBP16.86■□□□□ 0.29
TRPV3-206ENST00000573539 RNF123Q5XPI4 1314 aa16.86■□□□□ 0.29
TRPV3-206ENST00000573539 ABCA8O94911 1581 aa16.86■□□□□ 0.29
TRPV3-206ENST00000573539 SHANK2Q9UPX8 1470 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms