RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 IPO9Q96P70 1041 aaKnown RBP14.14□□□□□ -0.15
CHRNB1-205ENST00000573209 FHOD3Q2V2M9 1422 aa14.14□□□□□ -0.15
CHRNB1-205ENST00000573209 CALD1Q05682 793 aaKnown RBP14.14□□□□□ -0.15
CHRNB1-205ENST00000573209 LRRIQ1Q96JM4 1722 aa14.13□□□□□ -0.15
CHRNB1-205ENST00000573209 HSP90AA1P07900 732 aaKnown RBP14.13□□□□□ -0.15
CHRNB1-205ENST00000573209 SNAPC4Q5SXM2 1469 aa14.13□□□□□ -0.15
CHRNB1-205ENST00000573209 ZBTB47Q9UFB7 747 aaPredicted RBP14.12□□□□□ -0.15
CHRNB1-205ENST00000573209 ANP32AP39687 249 aaKnown RBP14.12□□□□□ -0.15
CHRNB1-205ENST00000573209 ABCA5Q8WWZ7 1642 aa14.11□□□□□ -0.15
CHRNB1-205ENST00000573209 WDR62O43379 1518 aa14.11□□□□□ -0.15
CHRNB1-205ENST00000573209 IPO4Q8TEX9 1081 aaKnown RBP14.11□□□□□ -0.15
CHRNB1-205ENST00000573209 FAM50AQ14320 339 aaKnown RBP14.1□□□□□ -0.15
CHRNB1-205ENST00000573209 CHMP4AQ9BY43 222 aa14.1□□□□□ -0.15
CHRNB1-205ENST00000573209 FGD6Q6ZV73 1430 aa14.1□□□□□ -0.15
CHRNB1-205ENST00000573209 RAD54L2Q9Y4B4 1467 aa14.1□□□□□ -0.15
CHRNB1-205ENST00000573209 SUPT6HQ7KZ85 1726 aaKnown RBP14.1□□□□□ -0.15
CHRNB1-205ENST00000573209 PRDM4Q9UKN5 801 aa14.1□□□□□ -0.15
CHRNB1-205ENST00000573209 CENPJQ9HC77 1338 aaPredicted RBP14.09□□□□□ -0.15
CHRNB1-205ENST00000573209 BBXQ8WY36 941 aaPredicted RBP14.09□□□□□ -0.15
CHRNB1-205ENST00000573209 PTPN23Q9H3S7 1636 aa14.09□□□□□ -0.15
CHRNB1-205ENST00000573209 CCDC18Q5T9S5 1454 aa14.07□□□□□ -0.16
CHRNB1-205ENST00000573209 EHBP1L1Q8N3D4 1523 aa14.06□□□□□ -0.16
CHRNB1-205ENST00000573209 GSE1Q14687 1217 aa14.06□□□□□ -0.16
CHRNB1-205ENST00000573209 HFM1A2PYH4 1435 aa14.06□□□□□ -0.16
CHRNB1-205ENST00000573209 DHX37Q8IY37 1157 aaKnown RBP14.05□□□□□ -0.16
CHRNB1-205ENST00000573209 GCC2Q8IWJ2 1684 aa14.05□□□□□ -0.16
CHRNB1-205ENST00000573209 UACAQ9BZF9 1416 aa14.04□□□□□ -0.16
CHRNB1-205ENST00000573209 GRIN2BQ13224 1484 aa14.04□□□□□ -0.16
CHRNB1-205ENST00000573209 PPM1GO15355 546 aaPredicted RBP14.03□□□□□ -0.16
CHRNB1-205ENST00000573209 PPP1R15AO75807 674 aaPredicted RBP14.03□□□□□ -0.16
CHRNB1-205ENST00000573209 SIN3AQ96ST3 1273 aa14.03□□□□□ -0.16
CHRNB1-205ENST00000573209 CHMP4BQ9H444 224 aaKnown RBP14.03□□□□□ -0.16
CHRNB1-205ENST00000573209 CANXP27824 592 aaKnown RBP14.02□□□□□ -0.16
CHRNB1-205ENST00000573209 CCER2I3L3R5 266 aa14.02□□□□□ -0.17
CHRNB1-205ENST00000573209 GTF2E1P29083 439 aaPredicted RBP14.02□□□□□ -0.17
CHRNB1-205ENST00000573209 HECW1Q76N89 1606 aa14.01□□□□□ -0.17
CHRNB1-205ENST00000573209 P3H3Q8IVL6 736 aa14.01□□□□□ -0.17
CHRNB1-205ENST00000573209 MYOM3Q5VTT5 1437 aa14.01□□□□□ -0.17
CHRNB1-205ENST00000573209 MTUS2Q5JR59 1369 aa14.01□□□□□ -0.17
CHRNB1-205ENST00000573209 ZNF608Q9ULD9 1512 aaPredicted RBP14□□□□□ -0.17
CHRNB1-205ENST00000573209 NCOA2Q15596 1464 aa14□□□□□ -0.17
CHRNB1-205ENST00000573209 ARHGEF11O15085 1522 aa14□□□□□ -0.17
CHRNB1-205ENST00000573209 UGGT2Q9NYU1 1516 aa13.99□□□□□ -0.17
CHRNB1-205ENST00000573209 DDX10Q13206 875 aaKnown RBP13.99□□□□□ -0.17
CHRNB1-205ENST00000573209 CNGB1Q14028 1251 aaPredicted RBP13.98□□□□□ -0.17
CHRNB1-205ENST00000573209 ATP1B4Q9UN42 357 aaPredicted RBP13.98□□□□□ -0.17
CHRNB1-205ENST00000573209 TONSLQ96HA7 1378 aa13.98□□□□□ -0.17
CHRNB1-205ENST00000573209 KCNH8Q96L42 1107 aa13.97□□□□□ -0.17
CHRNB1-205ENST00000573209 PPP4R2Q9NY27 417 aa13.97□□□□□ -0.17
CHRNB1-205ENST00000573209 GAPVD1Q14C86 1478 aa13.97□□□□□ -0.17
CHRNB1-205ENST00000573209 NPM2Q86SE8 214 aaKnown RBP13.97□□□□□ -0.17
CHRNB1-205ENST00000573209 NAIPQ13075 1403 aa13.97□□□□□ -0.17
CHRNB1-205ENST00000573209 PBRM1Q86U86 1689 aa13.97□□□□□ -0.17
CHRNB1-205ENST00000573209 SAMD1Q6SPF0 538 aaPredicted RBP13.96□□□□□ -0.17
CHRNB1-205ENST00000573209 TDRD9Q8NDG6 1382 aaKnown RBP13.96□□□□□ -0.17
CHRNB1-205ENST00000573209 NCLP19338 710 aaKnown RBP13.96□□□□□ -0.18
CHRNB1-205ENST00000573209 TCOF1Q13428 1488 aaKnown RBP13.95□□□□□ -0.18
CHRNB1-205ENST00000573209 AKNAQ7Z591 1439 aa13.95□□□□□ -0.18
CHRNB1-205ENST00000573209 RGS3P49796 1198 aa13.95□□□□□ -0.18
CHRNB1-205ENST00000573209 STAC3Q96MF2 364 aa13.95□□□□□ -0.18
CHRNB1-205ENST00000573209 PTPRKQ15262 1439 aa13.95□□□□□ -0.18
CHRNB1-205ENST00000573209 KDM5BQ9UGL1 1544 aa13.95□□□□□ -0.18
CHRNB1-205ENST00000573209 ANP32CO43423 234 aa13.94□□□□□ -0.18
CHRNB1-205ENST00000573209 TARBP1Q13395 1621 aaKnown RBP13.94□□□□□ -0.18
CHRNB1-205ENST00000573209 PDCL3Q9H2J4 239 aa13.93□□□□□ -0.18
CHRNB1-205ENST00000573209 TEX2Q8IWB9 1127 aa13.91□□□□□ -0.18
CHRNB1-205ENST00000573209 IFT140Q96RY7 1462 aa13.91□□□□□ -0.18
CHRNB1-205ENST00000573209 MAGI3Q5TCQ9 1506 aa13.9□□□□□ -0.18
CHRNB1-205ENST00000573209 FTSJ3Q8IY81 847 aaKnown RBP13.9□□□□□ -0.18
CHRNB1-205ENST00000573209 BCCIPQ9P287 314 aaKnown RBP eCLIP13.9□□□□□ -0.18
CHRNB1-205ENST00000573209 POLR1AO95602 1720 aaPredicted RBP13.89□□□□□ -0.19
CHRNB1-205ENST00000573209 IQGAP2Q13576 1575 aa13.89□□□□□ -0.19
CHRNB1-205ENST00000573209 HAP1P54257 671 aaPredicted RBP13.89□□□□□ -0.19
CHRNB1-205ENST00000573209 ZFP91Q96JP5 570 aaPredicted RBP13.88□□□□□ -0.19
CHRNB1-205ENST00000573209 TPRNQ4KMQ1 711 aa13.88□□□□□ -0.19
CHRNB1-205ENST00000573209 PNNQ9H307 717 aaKnown RBP13.88□□□□□ -0.19
CHRNB1-205ENST00000573209 ADAMTS12P58397 1594 aa13.87□□□□□ -0.19
CHRNB1-205ENST00000573209 CHRM1P11229 460 aaPredicted RBP13.87□□□□□ -0.19
CHRNB1-205ENST00000573209 FRAT1Q92837 279 aaPredicted RBP13.86□□□□□ -0.19
CHRNB1-205ENST00000573209 MIA2Q96PC5 1412 aa13.86□□□□□ -0.19
CHRNB1-205ENST00000573209 RRAGDQ9NQL2 400 aaPredicted RBP13.85□□□□□ -0.19
CHRNB1-205ENST00000573209 CNKSR2Q8WXI2 1034 aa13.84□□□□□ -0.19
CHRNB1-205ENST00000573209 LAS1LQ9Y4W2 734 aaKnown RBP13.84□□□□□ -0.19
CHRNB1-205ENST00000573209 ARID4BQ4LE39 1312 aaPredicted RBP13.84□□□□□ -0.19
CHRNB1-205ENST00000573209 EPRSP07814 1512 aaKnown RBP13.84□□□□□ -0.19
CHRNB1-205ENST00000573209 EIF4G3O43432 1585 aaKnown RBP13.82□□□□□ -0.2
CHRNB1-205ENST00000573209 DENND4BO75064 1496 aaPredicted RBP13.82□□□□□ -0.2
CHRNB1-205ENST00000573209 HIRIP3Q9BW71 556 aaPredicted RBP13.81□□□□□ -0.2
CHRNB1-205ENST00000573209 KDM6BO15054 1643 aa13.81□□□□□ -0.2
CHRNB1-205ENST00000573209 DNMT1P26358 1616 aaKnown RBP13.8□□□□□ -0.2
CHRNB1-205ENST00000573209 CLCN1P35523 988 aa13.8□□□□□ -0.2
CHRNB1-205ENST00000573209 TPM2P07951 284 aa13.79□□□□□ -0.2
CHRNB1-205ENST00000573209 FBLN2P98095 1184 aa13.79□□□□□ -0.2
CHRNB1-205ENST00000573209 C14orf37Q86TY3 774 aa13.79□□□□□ -0.2
CHRNB1-205ENST00000573209 SMAP1Q8IYB5 467 aaPredicted RBP13.79□□□□□ -0.2
CHRNB1-205ENST00000573209 HSP90B1P14625 803 aaKnown RBP13.78□□□□□ -0.2
CHRNB1-205ENST00000573209 DCAF11Q8TEB1 546 aa13.78□□□□□ -0.2
CHRNB1-205ENST00000573209 TRIM52Q96A61 297 aa13.78□□□□□ -0.2
CHRNB1-205ENST00000573209 CDK13Q14004 1512 aaKnown RBP13.77□□□□□ -0.21
CHRNB1-205ENST00000573209 SECISBP2LQ93073 1101 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms