RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 DMRT2Q9Y5R5 561 aa17.38■□□□□ 0.37
CHMP6-203ENST00000572525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.37■□□□□ 0.37
CHMP6-203ENST00000572525 HNRNPUL2Q1KMD3 747 aaKnown RBP17.37■□□□□ 0.37
CHMP6-203ENST00000572525 IQSEC2Q5JU85 1478 aa17.37■□□□□ 0.37
CHMP6-203ENST00000572525 MYO5CQ9NQX4 1742 aa17.36■□□□□ 0.37
CHMP6-203ENST00000572525 ILDR2Q71H61 639 aa17.36■□□□□ 0.37
CHMP6-203ENST00000572525 C9orf84Q5VXU9 1444 aa17.36■□□□□ 0.37
CHMP6-203ENST00000572525 ATP10AO60312 1499 aa17.36■□□□□ 0.37
CHMP6-203ENST00000572525 REREQ9P2R6 1566 aa17.34■□□□□ 0.37
CHMP6-203ENST00000572525 PTPRTO14522 1441 aa17.33■□□□□ 0.36
CHMP6-203ENST00000572525 PLCH2O75038 1416 aa17.33■□□□□ 0.36
CHMP6-203ENST00000572525 UHRF1BP1Q6BDS2 1440 aa17.31■□□□□ 0.36
CHMP6-203ENST00000572525 KDM5CP41229 1560 aa17.31■□□□□ 0.36
CHMP6-203ENST00000572525 SCAPERQ9BY12 1400 aa17.3■□□□□ 0.36
CHMP6-203ENST00000572525 C3P01024 1663 aa17.29■□□□□ 0.36
CHMP6-203ENST00000572525 ZNF518AQ6AHZ1 1483 aa17.27■□□□□ 0.36
CHMP6-203ENST00000572525 LTBP4Q8N2S1 1624 aa17.27■□□□□ 0.36
CHMP6-203ENST00000572525 MLECQ14165 292 aa17.26■□□□□ 0.35
CHMP6-203ENST00000572525 CSRNP3Q8WYN3 585 aa17.26■□□□□ 0.35
CHMP6-203ENST00000572525 EEA1Q15075 1411 aa17.26■□□□□ 0.35
CHMP6-203ENST00000572525 PLPPR3Q6T4P5 718 aa17.25■□□□□ 0.35
CHMP6-203ENST00000572525 DIP2CQ9Y2E4 1556 aa17.23■□□□□ 0.35
CHMP6-203ENST00000572525 AGLP35573 1532 aa17.23■□□□□ 0.35
CHMP6-203ENST00000572525 CDK13Q14004 1512 aaKnown RBP17.23■□□□□ 0.35
CHMP6-203ENST00000572525 EFCAB2Q5VUJ9 269 aa17.21■□□□□ 0.35
CHMP6-203ENST00000572525 KIF14Q15058 1648 aa17.21■□□□□ 0.35
CHMP6-203ENST00000572525 MROH2AA6NES4 1674 aa17.2■□□□□ 0.34
CHMP6-203ENST00000572525 ABCA6Q8N139 1617 aa17.2■□□□□ 0.34
CHMP6-203ENST00000572525 MLH3Q9UHC1 1453 aa17.18■□□□□ 0.34
CHMP6-203ENST00000572525 CEBPAP49715 358 aaPredicted RBP17.18■□□□□ 0.34
CHMP6-203ENST00000572525 NCOA1Q15788 1441 aa17.18■□□□□ 0.34
CHMP6-203ENST00000572525 CDC42BPBQ9Y5S2 1711 aa17.18■□□□□ 0.34
CHMP6-203ENST00000572525 TRAPPC8Q9Y2L5 1435 aa17.17■□□□□ 0.34
CHMP6-203ENST00000572525 CNTLNQ9NXG0 1405 aa17.16■□□□□ 0.34
CHMP6-203ENST00000572525 ARHGAP5Q13017 1502 aa17.14■□□□□ 0.33
CHMP6-203ENST00000572525 ZNF142P52746 1687 aaPredicted RBP17.13■□□□□ 0.33
CHMP6-203ENST00000572525 ITSN2Q9NZM3 1697 aa17.13■□□□□ 0.33
CHMP6-203ENST00000572525 FMN1Q68DA7 1419 aa17.13■□□□□ 0.33
CHMP6-203ENST00000572525 PREX2Q70Z35 1606 aa17.13■□□□□ 0.33
CHMP6-203ENST00000572525 NPATQ14207 1427 aa17.13■□□□□ 0.33
CHMP6-203ENST00000572525 KIDINS220Q9ULH0 1771 aa17.12■□□□□ 0.33
CHMP6-203ENST00000572525 CDK11AQ9UQ88 783 aaPredicted RBP17.12■□□□□ 0.33
CHMP6-203ENST00000572525 TROQ12816 1431 aaPredicted RBP17.12■□□□□ 0.33
CHMP6-203ENST00000572525 ABCC1P33527 1531 aa17.11■□□□□ 0.33
CHMP6-203ENST00000572525 SUPT6HQ7KZ85 1726 aaKnown RBP17.1■□□□□ 0.33
CHMP6-203ENST00000572525 LRRIQ1Q96JM4 1722 aa17.1■□□□□ 0.33
CHMP6-203ENST00000572525 CAMSAP1Q5T5Y3 1602 aa17.1■□□□□ 0.33
CHMP6-203ENST00000572525 CLIP1P30622 1438 aa17.09■□□□□ 0.33
CHMP6-203ENST00000572525 PLA2R1Q13018 1463 aa17.07■□□□□ 0.32
CHMP6-203ENST00000572525 AFAP1Q8N556 730 aa17.07■□□□□ 0.32
CHMP6-203ENST00000572525 ESF1Q9H501 851 aaKnown RBP17.05■□□□□ 0.32
CHMP6-203ENST00000572525 CDC42BPAQ5VT25 1732 aa17.04■□□□□ 0.32
CHMP6-203ENST00000572525 MYO3AQ8NEV4 1616 aa17.04■□□□□ 0.32
CHMP6-203ENST00000572525 RANGAP1P46060 587 aaPredicted RBP17.03■□□□□ 0.32
CHMP6-203ENST00000572525 TCOF1Q13428 1488 aaKnown RBP17.02■□□□□ 0.32
CHMP6-203ENST00000572525 ARHGAP35Q9NRY4 1499 aa17■□□□□ 0.31
CHMP6-203ENST00000572525 CEP170BQ9Y4F5 1589 aaPredicted RBP17■□□□□ 0.31
CHMP6-203ENST00000572525 PKD2Q13563 968 aa16.99■□□□□ 0.31
CHMP6-203ENST00000572525 PLXNC1O60486 1568 aa16.98■□□□□ 0.31
CHMP6-203ENST00000572525 SAMD9LQ8IVG5 1584 aa16.98■□□□□ 0.31
CHMP6-203ENST00000572525 CLTCQ00610 1675 aaKnown RBP16.98■□□□□ 0.31
CHMP6-203ENST00000572525 POLR1AO95602 1720 aaPredicted RBP16.97■□□□□ 0.31
CHMP6-203ENST00000572525 MYT1LQ9UL68 1186 aa16.97■□□□□ 0.31
CHMP6-203ENST00000572525 CCDC18Q5T9S5 1454 aa16.97■□□□□ 0.31
CHMP6-203ENST00000572525 MED1Q15648 1581 aaPredicted RBP16.97■□□□□ 0.31
CHMP6-203ENST00000572525 UBAP1LF5GYI3 381 aa16.96■□□□□ 0.31
CHMP6-203ENST00000572525 ZMYM3Q14202 1370 aa16.96■□□□□ 0.31
CHMP6-203ENST00000572525 ZNF335Q9H4Z2 1342 aaPredicted RBP16.95■□□□□ 0.3
CHMP6-203ENST00000572525 INO80Q9ULG1 1556 aaPredicted RBP16.94■□□□□ 0.3
CHMP6-203ENST00000572525 CPS1P31327 1500 aa16.92■□□□□ 0.3
CHMP6-203ENST00000572525 ADGBQ8N7X0 1667 aa16.92■□□□□ 0.3
CHMP6-203ENST00000572525 PTPRKQ15262 1439 aa16.92■□□□□ 0.3
CHMP6-203ENST00000572525 ATP7AQ04656 1500 aa16.91■□□□□ 0.3
CHMP6-203ENST00000572525 DNMT1P26358 1616 aaKnown RBP16.89■□□□□ 0.29
CHMP6-203ENST00000572525 ATP1B4Q9UN42 357 aaPredicted RBP16.89■□□□□ 0.29
CHMP6-203ENST00000572525 PPP6R1Q9UPN7 881 aa16.89■□□□□ 0.29
CHMP6-203ENST00000572525 SYCP2Q9BX26 1530 aa16.89■□□□□ 0.29
CHMP6-203ENST00000572525 NCKAP5LQ9HCH0 1330 aa16.89■□□□□ 0.29
CHMP6-203ENST00000572525 A2ML1A8K2U0 1454 aa16.88■□□□□ 0.29
CHMP6-203ENST00000572525 CASKIN1Q8WXD9 1431 aa16.87■□□□□ 0.29
CHMP6-203ENST00000572525 KIAA1107Q9UPP5 1409 aa16.87■□□□□ 0.29
CHMP6-203ENST00000572525 PLEKHH2Q8IVE3 1493 aa16.87■□□□□ 0.29
CHMP6-203ENST00000572525 FAM135AQ9P2D6 1515 aa16.87■□□□□ 0.29
CHMP6-203ENST00000572525 A2MP01023 1474 aa16.86■□□□□ 0.29
CHMP6-203ENST00000572525 NEURL4Q96JN8 1562 aa16.85■□□□□ 0.29
CHMP6-203ENST00000572525 SPAG9O60271 1321 aaKnown RBP16.84■□□□□ 0.29
CHMP6-203ENST00000572525 DEPDC5O75140 1603 aa16.82■□□□□ 0.28
CHMP6-203ENST00000572525 GPATCH8Q9UKJ3 1502 aaKnown RBP16.82■□□□□ 0.28
CHMP6-203ENST00000572525 FYCO1Q9BQS8 1478 aa16.82■□□□□ 0.28
CHMP6-203ENST00000572525 TOM1O60784 492 aa16.82■□□□□ 0.28
CHMP6-203ENST00000572525 SHANK2Q9UPX8 1470 aa16.81■□□□□ 0.28
CHMP6-203ENST00000572525 UBTFP17480 764 aaKnown RBP16.81■□□□□ 0.28
CHMP6-203ENST00000572525 HSPA1LP34931 641 aa16.8■□□□□ 0.28
CHMP6-203ENST00000572525 ALKQ9UM73 1620 aa16.79■□□□□ 0.28
CHMP6-203ENST00000572525 VWDEQ8N2E2 1590 aa16.79■□□□□ 0.28
CHMP6-203ENST00000572525 MED14O60244 1454 aa16.77■□□□□ 0.28
CHMP6-203ENST00000572525 SYNMO15061 1565 aa16.77■□□□□ 0.27
CHMP6-203ENST00000572525 PZPP20742 1482 aa16.75■□□□□ 0.27
CHMP6-203ENST00000572525 RNF17Q9BXT8 1623 aaKnown RBP16.74■□□□□ 0.27
CHMP6-203ENST00000572525 RTEL1-TNFRSF6BF6WH68 1400 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms