RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 NAIPQ13075 1403 aa28.65■■■□□ 2.18
RPAIN-210ENST00000571613 ABCC5O15440 1437 aa28.63■■■□□ 2.17
RPAIN-210ENST00000571613 ZNF644Q9H582 1327 aaPredicted RBP28.61■■■□□ 2.17
RPAIN-210ENST00000571613 ZNF777Q9ULD5 760 aaPredicted RBP28.58■■■□□ 2.17
RPAIN-210ENST00000571613 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.57■■■□□ 2.16
RPAIN-210ENST00000571613 PREX2Q70Z35 1606 aa28.57■■■□□ 2.16
RPAIN-210ENST00000571613 GCC2Q8IWJ2 1684 aa28.56■■■□□ 2.16
RPAIN-210ENST00000571613 RSPH4AQ5TD94 716 aa28.55■■■□□ 2.16
RPAIN-210ENST00000571613 CHIC2Q9UKJ5 165 aa28.55■■■□□ 2.16
RPAIN-210ENST00000571613 NPM1P06748 294 aaKnown RBP eCLIP28.53■■■□□ 2.16
RPAIN-210ENST00000571613 RRP7BPQ9NSQ0 103 aa28.51■■■□□ 2.16
RPAIN-210ENST00000571613 WDR7Q9Y4E6 1490 aa28.51■■■□□ 2.15
RPAIN-210ENST00000571613 KCNH8Q96L42 1107 aa28.51■■■□□ 2.15
RPAIN-210ENST00000571613 TTC37Q6PGP7 1564 aa28.5■■■□□ 2.15
RPAIN-210ENST00000571613 SHANK2Q9UPX8 1470 aa28.5■■■□□ 2.15
RPAIN-210ENST00000571613 PLEKHH2Q8IVE3 1493 aa28.49■■■□□ 2.15
RPAIN-210ENST00000571613 MYO5CQ9NQX4 1742 aa28.49■■■□□ 2.15
RPAIN-210ENST00000571613 CDC42BPBQ9Y5S2 1711 aa28.49■■■□□ 2.15
RPAIN-210ENST00000571613 ADGRL2O95490 1459 aa28.48■■■□□ 2.15
RPAIN-210ENST00000571613 ARHGEF5Q12774 1597 aa28.48■■■□□ 2.15
RPAIN-210ENST00000571613 PLCH2O75038 1416 aa28.47■■■□□ 2.15
RPAIN-210ENST00000571613 ARHGAP5Q13017 1502 aa28.47■■■□□ 2.15
RPAIN-210ENST00000571613 CROCC2H7BZ55 1655 aa28.46■■■□□ 2.15
RPAIN-210ENST00000571613 TSPY4P0CV99 314 aa28.45■■■□□ 2.15
RPAIN-210ENST00000571613 TSPY10P0CW01 314 aa28.45■■■□□ 2.15
RPAIN-210ENST00000571613 ANKRD30AQ9BXX3 1397 aa28.45■■■□□ 2.14
RPAIN-210ENST00000571613 ADGBQ8N7X0 1667 aa28.44■■■□□ 2.14
RPAIN-210ENST00000571613 ARAP3Q8WWN8 1544 aa28.43■■■□□ 2.14
RPAIN-210ENST00000571613 NCOA1Q15788 1441 aa28.43■■■□□ 2.14
RPAIN-210ENST00000571613 KIAA1107Q9UPP5 1409 aa28.43■■■□□ 2.14
RPAIN-210ENST00000571613 MAPKBP1O60336 1514 aa28.43■■■□□ 2.14
RPAIN-210ENST00000571613 SAMD9LQ8IVG5 1584 aa28.42■■■□□ 2.14
RPAIN-210ENST00000571613 EFCAB2Q5VUJ9 269 aa28.42■■■□□ 2.14
RPAIN-210ENST00000571613 MBD5Q9P267 1494 aa28.41■■■□□ 2.14
RPAIN-210ENST00000571613 ASXL2Q76L83 1435 aa28.4■■■□□ 2.14
RPAIN-210ENST00000571613 CCDC141Q6ZP82 1450 aa28.4■■■□□ 2.14
RPAIN-210ENST00000571613 C9orf84Q5VXU9 1444 aa28.38■■■□□ 2.13
RPAIN-210ENST00000571613 HNRNPMP52272 730 aaKnown RBP eCLIP28.36■■■□□ 2.13
RPAIN-210ENST00000571613 TIMELESSQ9UNS1 1208 aa28.34■■■□□ 2.13
RPAIN-210ENST00000571613 ABCA9Q8IUA7 1624 aa28.33■■■□□ 2.13
RPAIN-210ENST00000571613 TRIM52Q96A61 297 aa28.32■■■□□ 2.12
RPAIN-210ENST00000571613 SYCP2Q9BX26 1530 aa28.29■■■□□ 2.12
RPAIN-210ENST00000571613 MAST1Q9Y2H9 1570 aa28.28■■■□□ 2.12
RPAIN-210ENST00000571613 KDM6BO15054 1643 aa28.27■■■□□ 2.12
RPAIN-210ENST00000571613 ANKRD50Q9ULJ7 1429 aa28.26■■■□□ 2.11
RPAIN-210ENST00000571613 RIMBP3CA6NJZ7 1639 aa28.24■■■□□ 2.11
RPAIN-210ENST00000571613 RIMBP3BA6NNM3 1639 aa28.24■■■□□ 2.11
RPAIN-210ENST00000571613 RIMBP3Q9UFD9 1639 aa28.24■■■□□ 2.11
RPAIN-210ENST00000571613 ABCC1P33527 1531 aa28.24■■■□□ 2.11
RPAIN-210ENST00000571613 KIF15Q9NS87 1388 aa28.22■■■□□ 2.11
RPAIN-210ENST00000571613 MPHOSPH9Q99550 1183 aa28.22■■■□□ 2.11
RPAIN-210ENST00000571613 CYB5RLQ6IPT4 315 aa28.19■■■□□ 2.1
RPAIN-210ENST00000571613 FANCAO15360 1455 aa28.19■■■□□ 2.1
RPAIN-210ENST00000571613 ARHGEF12Q9NZN5 1544 aa28.17■■■□□ 2.1
RPAIN-210ENST00000571613 SIN3AQ96ST3 1273 aa28.15■■■□□ 2.1
RPAIN-210ENST00000571613 PLXNC1O60486 1568 aa28.15■■■□□ 2.1
RPAIN-210ENST00000571613 NEUROD1Q13562 356 aa28.13■■■□□ 2.09
RPAIN-210ENST00000571613 RTEL1-TNFRSF6BF6WH68 1400 aa28.13■■■□□ 2.09
RPAIN-210ENST00000571613 SLC4A1APQ9BWU0 796 aaKnown RBP28.12■■■□□ 2.09
RPAIN-210ENST00000571613 CD109Q6YHK3 1445 aa28.11■■■□□ 2.09
RPAIN-210ENST00000571613 CFAP74Q9C0B2 1584 aa28.1■■■□□ 2.09
RPAIN-210ENST00000571613 DENND4BO75064 1496 aaPredicted RBP28.1■■■□□ 2.09
RPAIN-210ENST00000571613 ZNF316A6NFI3 1004 aaPredicted RBP28.09■■■□□ 2.09
RPAIN-210ENST00000571613 TRAPPC8Q9Y2L5 1435 aa28.09■■■□□ 2.09
RPAIN-210ENST00000571613 ADGRL1O94910 1474 aa28.08■■■□□ 2.09
RPAIN-210ENST00000571613 DUOX2Q9NRD8 1548 aa28.07■■■□□ 2.08
RPAIN-210ENST00000571613 SPAG9O60271 1321 aaKnown RBP28.07■■■□□ 2.08
RPAIN-210ENST00000571613 KDM5DQ9BY66 1539 aa28.07■■■□□ 2.08
RPAIN-210ENST00000571613 TONSLQ96HA7 1378 aa28.06■■■□□ 2.08
RPAIN-210ENST00000571613 PZPP20742 1482 aa28.06■■■□□ 2.08
RPAIN-210ENST00000571613 SCAPERQ9BY12 1400 aa28.04■■■□□ 2.08
RPAIN-210ENST00000571613 ERBINQ96RT1 1412 aa28.03■■■□□ 2.08
RPAIN-210ENST00000571613 NUP155O75694 1391 aa28.03■■■□□ 2.08
RPAIN-210ENST00000571613 ANKRD30BQ9BXX2 1392 aa28.01■■■□□ 2.07
RPAIN-210ENST00000571613 GLI2P10070 1586 aa28■■■□□ 2.07
RPAIN-210ENST00000571613 AFAP1Q8N556 730 aa27.99■■■□□ 2.07
RPAIN-210ENST00000571613 NEO1Q92859 1461 aa27.98■■■□□ 2.07
RPAIN-210ENST00000571613 PPP1R15AO75807 674 aaPredicted RBP27.97■■■□□ 2.07
RPAIN-210ENST00000571613 ZFYVE16Q7Z3T8 1539 aa27.97■■■□□ 2.07
RPAIN-210ENST00000571613 ZNF518AQ6AHZ1 1483 aa27.96■■■□□ 2.07
RPAIN-210ENST00000571613 UNC13BO14795 1591 aa27.93■■■□□ 2.06
RPAIN-210ENST00000571613 ATP7AQ04656 1500 aa27.93■■■□□ 2.06
RPAIN-210ENST00000571613 PKD2Q13563 968 aa27.93■■■□□ 2.06
RPAIN-210ENST00000571613 INO80Q9ULG1 1556 aaPredicted RBP27.93■■■□□ 2.06
RPAIN-210ENST00000571613 RPRD2Q5VT52 1461 aaKnown RBP27.91■■■□□ 2.06
RPAIN-210ENST00000571613 FOXD1Q16676 465 aa27.9■■■□□ 2.06
RPAIN-210ENST00000571613 MAP3K4Q9Y6R4 1608 aa27.9■■■□□ 2.06
RPAIN-210ENST00000571613 POGZQ7Z3K3 1410 aa27.88■■■□□ 2.05
RPAIN-210ENST00000571613 FAM135AQ9P2D6 1515 aa27.87■■■□□ 2.05
RPAIN-210ENST00000571613 MAGI2Q86UL8 1455 aa27.87■■■□□ 2.05
RPAIN-210ENST00000571613 MYT1LQ9UL68 1186 aa27.85■■■□□ 2.05
RPAIN-210ENST00000571613 KDM5CP41229 1560 aa27.83■■■□□ 2.05
RPAIN-210ENST00000571613 MLH3Q9UHC1 1453 aa27.83■■■□□ 2.05
RPAIN-210ENST00000571613 IQGAP3Q86VI3 1631 aa27.83■■■□□ 2.04
RPAIN-210ENST00000571613 DHX29Q7Z478 1369 aaKnown RBP27.82■■■□□ 2.04
RPAIN-210ENST00000571613 DIP2BQ9P265 1576 aa27.82■■■□□ 2.04
RPAIN-210ENST00000571613 FAM69CQ0P6D2 419 aa27.81■■■□□ 2.04
RPAIN-210ENST00000571613 DIEXFQ68CQ4 756 aaKnown RBP27.8■■■□□ 2.04
RPAIN-210ENST00000571613 EIF2AK4Q9P2K8 1649 aaKnown RBP27.78■■■□□ 2.04
RPAIN-210ENST00000571613 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.78■■■□□ 2.042e-6■□□□□ 10.3
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms