RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 SUPT6HQ7KZ85 1726 aaKnown RBP20.94■□□□□ 0.94
SMG6-207ENST00000570756 PAK3O75914 559 aaPredicted RBP20.94■□□□□ 0.94
SMG6-207ENST00000570756 RTL5Q5HYW3 569 aaPredicted RBP20.94■□□□□ 0.94
SMG6-207ENST00000570756 CUL7Q14999 1698 aa20.93■□□□□ 0.94
SMG6-207ENST00000570756 GCC2Q8IWJ2 1684 aa20.93■□□□□ 0.94
SMG6-207ENST00000570756 IPO9Q96P70 1041 aaKnown RBP20.93■□□□□ 0.94
SMG6-207ENST00000570756 CHMP7Q8WUX9 453 aaPredicted RBP20.92■□□□□ 0.94
SMG6-207ENST00000570756 SMG6Q86US8 1419 aaKnown RBP20.92■□□□□ 0.94
SMG6-207ENST00000570756 EHBP1L1Q8N3D4 1523 aa20.9■□□□□ 0.94
SMG6-207ENST00000570756 MAGI1Q96QZ7 1491 aaPredicted RBP20.89■□□□□ 0.94
SMG6-207ENST00000570756 AKNAQ7Z591 1439 aa20.89■□□□□ 0.93
SMG6-207ENST00000570756 POLR1AO95602 1720 aaPredicted RBP20.88■□□□□ 0.93
SMG6-207ENST00000570756 CCDC136Q96JN2 1154 aa20.87■□□□□ 0.93
SMG6-207ENST00000570756 PRKCSHP14314 528 aaPredicted RBP20.87■□□□□ 0.93
SMG6-207ENST00000570756 ZBTB47Q9UFB7 747 aaPredicted RBP20.87■□□□□ 0.93
SMG6-207ENST00000570756 DENND4BO75064 1496 aaPredicted RBP20.86■□□□□ 0.93
SMG6-207ENST00000570756 SYNJ2O15056 1496 aa20.85■□□□□ 0.93
SMG6-207ENST00000570756 C11orf95C9JLR9 678 aaPredicted RBP20.85■□□□□ 0.93
SMG6-207ENST00000570756 LRRIQ1Q96JM4 1722 aa20.85■□□□□ 0.93
SMG6-207ENST00000570756 RNF123Q5XPI4 1314 aa20.84■□□□□ 0.93
SMG6-207ENST00000570756 CHD1O14646 1710 aa20.84■□□□□ 0.93
SMG6-207ENST00000570756 L3MBTL2Q969R5 705 aa20.84■□□□□ 0.93
SMG6-207ENST00000570756 NUDCQ9Y266 331 aa20.84■□□□□ 0.93
SMG6-207ENST00000570756 UGGT2Q9NYU1 1516 aa20.84■□□□□ 0.93
SMG6-207ENST00000570756 GRIN2AQ12879 1464 aa20.83■□□□□ 0.92
SMG6-207ENST00000570756 RRP7BPQ9NSQ0 103 aa20.83■□□□□ 0.92
SMG6-207ENST00000570756 TCOF1Q13428 1488 aaKnown RBP20.82■□□□□ 0.92
SMG6-207ENST00000570756 SAMD9Q5K651 1589 aa20.82■□□□□ 0.92
SMG6-207ENST00000570756 ARHGEF11O15085 1522 aa20.81■□□□□ 0.92
SMG6-207ENST00000570756 MPHOSPH9Q99550 1183 aa20.8■□□□□ 0.92
SMG6-207ENST00000570756 KIF7Q2M1P5 1343 aa20.79■□□□□ 0.92
SMG6-207ENST00000570756 SPATA31E1Q6ZUB1 1445 aa20.76■□□□□ 0.91
SMG6-207ENST00000570756 RPRD2Q5VT52 1461 aaKnown RBP20.76■□□□□ 0.91
SMG6-207ENST00000570756 CEP170Q5SW79 1584 aa20.75■□□□□ 0.91
SMG6-207ENST00000570756 CHIC2Q9UKJ5 165 aa20.75■□□□□ 0.91
SMG6-207ENST00000570756 KDM6BO15054 1643 aa20.73■□□□□ 0.91
SMG6-207ENST00000570756 TEX14Q8IWB6 1497 aa20.72■□□□□ 0.91
SMG6-207ENST00000570756 MIA2Q96PC5 1412 aa20.71■□□□□ 0.91
SMG6-207ENST00000570756 ANKRD30BQ9BXX2 1392 aa20.7■□□□□ 0.9
SMG6-207ENST00000570756 NBPF8Q3BBV2 869 aa20.7■□□□□ 0.9
SMG6-207ENST00000570756 USP35Q9P2H5 1018 aa20.69■□□□□ 0.9
SMG6-207ENST00000570756 DHX29Q7Z478 1369 aaKnown RBP20.68■□□□□ 0.9
SMG6-207ENST00000570756 MAGI3Q5TCQ9 1506 aa20.67■□□□□ 0.9
SMG6-207ENST00000570756 NUP160Q12769 1436 aa20.66■□□□□ 0.9
SMG6-207ENST00000570756 ANO8Q9HCE9 1232 aaPredicted RBP20.65■□□□□ 0.9
SMG6-207ENST00000570756 TCERG1O14776 1098 aaKnown RBP20.64■□□□□ 0.89
SMG6-207ENST00000570756 FOXD1Q16676 465 aa20.64■□□□□ 0.89
SMG6-207ENST00000570756 ARID4BQ4LE39 1312 aaPredicted RBP20.63■□□□□ 0.89
SMG6-207ENST00000570756 IQGAP2Q13576 1575 aa20.62■□□□□ 0.89
SMG6-207ENST00000570756 ROCK1Q13464 1354 aa20.62■□□□□ 0.89
SMG6-207ENST00000570756 KIAA0586Q9BVV6 1533 aa20.61■□□□□ 0.89
SMG6-207ENST00000570756 PNISRQ8TF01 805 aaKnown RBP20.59■□□□□ 0.89
SMG6-207ENST00000570756 PPM1GO15355 546 aaPredicted RBP20.58■□□□□ 0.88
SMG6-207ENST00000570756 NEFMP07197 916 aa20.58■□□□□ 0.88
SMG6-207ENST00000570756 OSCARQ8IYS5 282 aa20.58■□□□□ 0.88
SMG6-207ENST00000570756 IL27Q8NEV9 243 aa20.58■□□□□ 0.88
SMG6-207ENST00000570756 ROCK2O75116 1388 aaKnown RBP20.57■□□□□ 0.88
SMG6-207ENST00000570756 TMC1Q8TDI8 760 aa20.57■□□□□ 0.88
SMG6-207ENST00000570756 JPH4Q96JJ6 628 aa20.57■□□□□ 0.88
SMG6-207ENST00000570756 NPM2Q86SE8 214 aaKnown RBP20.57■□□□□ 0.88
SMG6-207ENST00000570756 SALL2Q9Y467 1007 aaPredicted RBP20.57■□□□□ 0.88
SMG6-207ENST00000570756 MS4A1P11836 297 aa20.56■□□□□ 0.88
SMG6-207ENST00000570756 USP47Q96K76 1375 aa20.55■□□□□ 0.88
SMG6-207ENST00000570756 RRP1P56182 461 aaKnown RBP20.55■□□□□ 0.88
SMG6-207ENST00000570756 SLC4A1APQ9BWU0 796 aaKnown RBP20.55■□□□□ 0.88
SMG6-207ENST00000570756 EPRSP07814 1512 aaKnown RBP20.54■□□□□ 0.88
SMG6-207ENST00000570756 PDE4AP27815 886 aa20.54■□□□□ 0.88
SMG6-207ENST00000570756 BCORL1Q5H9F3 1711 aa20.53■□□□□ 0.88
SMG6-207ENST00000570756 DAPK1P53355 1430 aa20.53■□□□□ 0.88
SMG6-207ENST00000570756 MBD5Q9P267 1494 aa20.52■□□□□ 0.88
SMG6-207ENST00000570756 POLR3GLQ9BT43 218 aa20.52■□□□□ 0.87
SMG6-207ENST00000570756 BACH2Q9BYV9 841 aa20.52■□□□□ 0.87
SMG6-207ENST00000570756 WASHC2CQ9Y4E1 1318 aa20.52■□□□□ 0.87
SMG6-207ENST00000570756 LRPPRCP42704 1394 aaKnown RBP20.52■□□□□ 0.87
SMG6-207ENST00000570756 CLASP1Q7Z460 1538 aa20.52■□□□□ 0.87
SMG6-207ENST00000570756 KIF14Q15058 1648 aa20.51■□□□□ 0.87
SMG6-207ENST00000570756 KTN1Q86UP2 1357 aaKnown RBP20.51■□□□□ 0.87
SMG6-207ENST00000570756 CNGB1Q14028 1251 aaPredicted RBP20.51■□□□□ 0.87
SMG6-207ENST00000570756 LAS1LQ9Y4W2 734 aaKnown RBP20.51■□□□□ 0.87
SMG6-207ENST00000570756 DNMT1P26358 1616 aaKnown RBP20.51■□□□□ 0.87
SMG6-207ENST00000570756 ERCC6L2Q5T890 1561 aa20.51■□□□□ 0.87
SMG6-207ENST00000570756 KIF15Q9NS87 1388 aa20.5■□□□□ 0.87
SMG6-207ENST00000570756 BRD4O60885 1362 aaPredicted RBP20.49■□□□□ 0.87
SMG6-207ENST00000570756 KDM5CP41229 1560 aa20.49■□□□□ 0.87
SMG6-207ENST00000570756 PRG4Q92954 1404 aaPredicted RBP20.48■□□□□ 0.87
SMG6-207ENST00000570756 DISP1Q96F81 1524 aa20.48■□□□□ 0.87
SMG6-207ENST00000570756 EXOC6Q8TAG9 804 aa20.48■□□□□ 0.87
SMG6-207ENST00000570756 DDRGK1Q96HY6 314 aa20.48■□□□□ 0.87
SMG6-207ENST00000570756 RCAN3Q9UKA8 241 aa20.47■□□□□ 0.87
SMG6-207ENST00000570756 ABCC5O15440 1437 aa20.46■□□□□ 0.87
SMG6-207ENST00000570756 RTN4Q9NQC3 1192 aaKnown RBP20.46■□□□□ 0.87
SMG6-207ENST00000570756 MYBBP1AQ9BQG0 1328 aaKnown RBP20.45■□□□□ 0.86
SMG6-207ENST00000570756 PDE3BQ13370 1112 aa20.44■□□□□ 0.86
SMG6-207ENST00000570756 RALBP1Q15311 655 aa20.44■□□□□ 0.86
SMG6-207ENST00000570756 CDK13Q14004 1512 aaKnown RBP20.44■□□□□ 0.86
SMG6-207ENST00000570756 PZPP20742 1482 aa20.42■□□□□ 0.86
SMG6-207ENST00000570756 KIAA0556O60303 1618 aa20.42■□□□□ 0.86
SMG6-207ENST00000570756 SHROOM2Q13796 1616 aa20.41■□□□□ 0.86
SMG6-207ENST00000570756 KIAA1107Q9UPP5 1409 aa20.41■□□□□ 0.86
SMG6-207ENST00000570756 SENP3-EIF4A1A0A087X0R7 540 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms