RNA–Protein interactions for RNA: ENST00000570308.5

MMP2-208, Transcript of matrix metallopeptidase 2, humanhuman

TSL 1 (best) BASIC

Gene MMP2, Length 3,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2-208ENST00000570308 SLC24A1O60721 1099 aa14.33□□□□□ -0.12
MMP2-208ENST00000570308 ANP32AP39687 249 aaKnown RBP14.33□□□□□ -0.12
MMP2-208ENST00000570308 ZBTB47Q9UFB7 747 aaPredicted RBP14.32□□□□□ -0.12
MMP2-208ENST00000570308 MIA2Q96PC5 1412 aa14.32□□□□□ -0.12
MMP2-208ENST00000570308 ANP32CO43423 234 aa14.32□□□□□ -0.12
MMP2-208ENST00000570308 AKNAQ7Z591 1439 aa14.32□□□□□ -0.12
MMP2-208ENST00000570308 PTPN23Q9H3S7 1636 aa14.31□□□□□ -0.12
MMP2-208ENST00000570308 NUP153P49790 1475 aaKnown RBP14.31□□□□□ -0.12
MMP2-208ENST00000570308 P3H3Q8IVL6 736 aa14.31□□□□□ -0.12
MMP2-208ENST00000570308 ABCA8O94911 1581 aa14.3□□□□□ -0.12
MMP2-208ENST00000570308 SETD5Q9C0A6 1442 aa14.3□□□□□ -0.12
MMP2-208ENST00000570308 MTUS2Q5JR59 1369 aa14.3□□□□□ -0.12
MMP2-208ENST00000570308 IPO9Q96P70 1041 aaKnown RBP14.3□□□□□ -0.12
MMP2-208ENST00000570308 C11orf95C9JLR9 678 aaPredicted RBP14.29□□□□□ -0.12
MMP2-208ENST00000570308 GLIPR1L2Q4G1C9 344 aa14.29□□□□□ -0.12
MMP2-208ENST00000570308 GCC2Q8IWJ2 1684 aa14.29□□□□□ -0.12
MMP2-208ENST00000570308 CARMIL2Q6F5E8 1435 aa14.28□□□□□ -0.12
MMP2-208ENST00000570308 CHD1O14646 1710 aa14.27□□□□□ -0.13
MMP2-208ENST00000570308 WASHC2AQ641Q2 1341 aa14.26□□□□□ -0.13
MMP2-208ENST00000570308 MAPKBP1O60336 1514 aa14.26□□□□□ -0.13
MMP2-208ENST00000570308 HFM1A2PYH4 1435 aa14.26□□□□□ -0.13
MMP2-208ENST00000570308 CDK13Q14004 1512 aaKnown RBP14.25□□□□□ -0.13
MMP2-208ENST00000570308 ITSN2Q9NZM3 1697 aa14.25□□□□□ -0.13
MMP2-208ENST00000570308 RAB3GAP2Q9H2M9 1393 aa14.25□□□□□ -0.13
MMP2-208ENST00000570308 RSPH6AQ9H0K4 717 aa14.24□□□□□ -0.13
MMP2-208ENST00000570308 USP35Q9P2H5 1018 aa14.24□□□□□ -0.13
MMP2-208ENST00000570308 PPP1R15AO75807 674 aaPredicted RBP14.22□□□□□ -0.13
MMP2-208ENST00000570308 CHMP7Q8WUX9 453 aaPredicted RBP14.22□□□□□ -0.13
MMP2-208ENST00000570308 PODXL2Q9NZ53 605 aa14.22□□□□□ -0.13
MMP2-208ENST00000570308 HNRNPUQ00839 825 aaKnown RBP eCLIP14.22□□□□□ -0.13
MMP2-208ENST00000570308 B4GALNT3Q6L9W6 998 aa14.21□□□□□ -0.13
MMP2-208ENST00000570308 WASHC2CQ9Y4E1 1318 aa14.21□□□□□ -0.13
MMP2-208ENST00000570308 DNMT1P26358 1616 aaKnown RBP14.2□□□□□ -0.14
MMP2-208ENST00000570308 TROQ12816 1431 aaPredicted RBP14.2□□□□□ -0.14
MMP2-208ENST00000570308 NEFMP07197 916 aa14.2□□□□□ -0.14
MMP2-208ENST00000570308 CLASP1Q7Z460 1538 aa14.19□□□□□ -0.14
MMP2-208ENST00000570308 DAXXQ9UER7 740 aaPredicted RBP14.19□□□□□ -0.14
MMP2-208ENST00000570308 PTPRKQ15262 1439 aa14.18□□□□□ -0.14
MMP2-208ENST00000570308 BRPF3Q9ULD4 1205 aa14.17□□□□□ -0.14
MMP2-208ENST00000570308 PLEKHG5O94827 1062 aa14.17□□□□□ -0.14
MMP2-208ENST00000570308 CROCC2H7BZ55 1655 aa14.16□□□□□ -0.14
MMP2-208ENST00000570308 TIMELESSQ9UNS1 1208 aa14.16□□□□□ -0.14
MMP2-208ENST00000570308 ROCK1Q13464 1354 aa14.16□□□□□ -0.14
MMP2-208ENST00000570308 JPH4Q96JJ6 628 aa14.16□□□□□ -0.14
MMP2-208ENST00000570308 NAIPQ13075 1403 aa14.16□□□□□ -0.14
MMP2-208ENST00000570308 UACAQ9BZF9 1416 aa14.15□□□□□ -0.14
MMP2-208ENST00000570308 PLB1Q6P1J6 1458 aa14.14□□□□□ -0.15
MMP2-208ENST00000570308 ADGBQ8N7X0 1667 aa14.14□□□□□ -0.15
MMP2-208ENST00000570308 ABCC10Q5T3U5 1492 aa14.12□□□□□ -0.15
MMP2-208ENST00000570308 KIF14Q15058 1648 aa14.12□□□□□ -0.15
MMP2-208ENST00000570308 ZMYND15Q9H091 742 aa14.12□□□□□ -0.15
MMP2-208ENST00000570308 PPM1GO15355 546 aaPredicted RBP14.11□□□□□ -0.15
MMP2-208ENST00000570308 ATP1B4Q9UN42 357 aaPredicted RBP14.11□□□□□ -0.15
MMP2-208ENST00000570308 VSIG10Q8N0Z9 540 aa14.11□□□□□ -0.15
MMP2-208ENST00000570308 ADGRL2O95490 1459 aa14.1□□□□□ -0.15
MMP2-208ENST00000570308 CDC42BPAQ5VT25 1732 aa14.1□□□□□ -0.15
MMP2-208ENST00000570308 LAS1LQ9Y4W2 734 aaKnown RBP14.1□□□□□ -0.15
MMP2-208ENST00000570308 ATP10BO94823 1461 aa14.1□□□□□ -0.15
MMP2-208ENST00000570308 FAM50AQ14320 339 aaKnown RBP14.1□□□□□ -0.15
MMP2-208ENST00000570308 PRG4Q92954 1404 aaPredicted RBP14.1□□□□□ -0.15
MMP2-208ENST00000570308 UHRF1BP1LA0JNW5 1464 aa14.09□□□□□ -0.15
MMP2-208ENST00000570308 GPATCH8Q9UKJ3 1502 aaKnown RBP14.09□□□□□ -0.15
MMP2-208ENST00000570308 DAPK1P53355 1430 aa14.09□□□□□ -0.15
MMP2-208ENST00000570308 SHANK2Q9UPX8 1470 aa14.08□□□□□ -0.15
MMP2-208ENST00000570308 GSE1Q14687 1217 aa14.08□□□□□ -0.16
MMP2-208ENST00000570308 ABCC2Q92887 1545 aa14.07□□□□□ -0.16
MMP2-208ENST00000570308 ARHGEF5Q12774 1597 aa14.07□□□□□ -0.16
MMP2-208ENST00000570308 CAMSAP2Q08AD1 1489 aa14.06□□□□□ -0.16
MMP2-208ENST00000570308 PREX2Q70Z35 1606 aa14.05□□□□□ -0.16
MMP2-208ENST00000570308 ABCC5O15440 1437 aa14.05□□□□□ -0.16
MMP2-208ENST00000570308 FAM43AQ8N2R8 423 aa14.05□□□□□ -0.16
MMP2-208ENST00000570308 PTPRGP23470 1445 aa14.04□□□□□ -0.16
MMP2-208ENST00000570308 HIRIP3Q9BW71 556 aaPredicted RBP14.03□□□□□ -0.16
MMP2-208ENST00000570308 NPM2Q86SE8 214 aaKnown RBP14.02□□□□□ -0.17
MMP2-208ENST00000570308 KDM6BO15054 1643 aa14.01□□□□□ -0.17
MMP2-208ENST00000570308 MAST1Q9Y2H9 1570 aa14.01□□□□□ -0.17
MMP2-208ENST00000570308 DENND4BO75064 1496 aaPredicted RBP14□□□□□ -0.17
MMP2-208ENST00000570308 KDM5BQ9UGL1 1544 aa14□□□□□ -0.17
MMP2-208ENST00000570308 CDC42BPBQ9Y5S2 1711 aa13.99□□□□□ -0.17
MMP2-208ENST00000570308 KDM5DQ9BY66 1539 aa13.98□□□□□ -0.17
MMP2-208ENST00000570308 FBLN2P98095 1184 aa13.98□□□□□ -0.17
MMP2-208ENST00000570308 ARAP3Q8WWN8 1544 aa13.97□□□□□ -0.17
MMP2-208ENST00000570308 ERCC6L2Q5T890 1561 aa13.97□□□□□ -0.17
MMP2-208ENST00000570308 ZCCHC11Q5TAX3 1644 aaKnown RBP13.95□□□□□ -0.18
MMP2-208ENST00000570308 FRAT1Q92837 279 aaPredicted RBP13.95□□□□□ -0.18
MMP2-208ENST00000570308 MYO5CQ9NQX4 1742 aa13.94□□□□□ -0.18
MMP2-208ENST00000570308 NCOA1Q15788 1441 aa13.94□□□□□ -0.18
MMP2-208ENST00000570308 SAMD9LQ8IVG5 1584 aa13.94□□□□□ -0.18
MMP2-208ENST00000570308 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.93□□□□□ -0.18
MMP2-208ENST00000570308 PLEKHD1A6NEE1 506 aa13.93□□□□□ -0.18
MMP2-208ENST00000570308 SIN3AQ96ST3 1273 aa13.93□□□□□ -0.18
MMP2-208ENST00000570308 MBD5Q9P267 1494 aa13.93□□□□□ -0.18
MMP2-208ENST00000570308 HSP90AA2PQ14568 343 aaPredicted RBP13.92□□□□□ -0.18
MMP2-208ENST00000570308 PLXNC1O60486 1568 aa13.92□□□□□ -0.18
MMP2-208ENST00000570308 TTC37Q6PGP7 1564 aa13.92□□□□□ -0.18
MMP2-208ENST00000570308 PLEKHH2Q8IVE3 1493 aa13.91□□□□□ -0.18
MMP2-208ENST00000570308 ZBED9Q6R2W3 1325 aa13.9□□□□□ -0.18
MMP2-208ENST00000570308 KIAA1107Q9UPP5 1409 aa13.9□□□□□ -0.18
MMP2-208ENST00000570308 RRP9O43818 475 aaKnown RBP13.89□□□□□ -0.19
MMP2-208ENST00000570308 NFKBIBQ15653 356 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms