RNA–Protein interactions for RNA: ENST00000570177.6

TCF4-245, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 1,872 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-245ENST00000570177 SCAF1Q9H7N4 1312 aaKnown RBP14.6□□□□□ -0.07
TCF4-245ENST00000570177 ZCCHC11Q5TAX3 1644 aaKnown RBP14.6□□□□□ -0.07
TCF4-245ENST00000570177 ABCC5O15440 1437 aa14.6□□□□□ -0.07
TCF4-245ENST00000570177 NAIPQ13075 1403 aa14.6□□□□□ -0.07
TCF4-245ENST00000570177 CFDP1Q9UEE9 299 aaPredicted RBP14.59□□□□□ -0.07
TCF4-245ENST00000570177 CDC42BPAQ5VT25 1732 aa14.59□□□□□ -0.07
TCF4-245ENST00000570177 DAPK1P53355 1430 aa14.57□□□□□ -0.08
TCF4-245ENST00000570177 CAMSAP2Q08AD1 1489 aa14.57□□□□□ -0.08
TCF4-245ENST00000570177 ITSN2Q9NZM3 1697 aa14.57□□□□□ -0.08
TCF4-245ENST00000570177 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.56□□□□□ -0.08
TCF4-245ENST00000570177 DNMT1P26358 1616 aaKnown RBP14.55□□□□□ -0.08
TCF4-245ENST00000570177 AKNAQ7Z591 1439 aa14.55□□□□□ -0.08
TCF4-245ENST00000570177 CLSPNQ9HAW4 1339 aa14.55□□□□□ -0.08
TCF4-245ENST00000570177 CHIC2Q9UKJ5 165 aa14.55□□□□□ -0.08
TCF4-245ENST00000570177 TTC37Q6PGP7 1564 aa14.54□□□□□ -0.08
TCF4-245ENST00000570177 MAPKBP1O60336 1514 aa14.53□□□□□ -0.08
TCF4-245ENST00000570177 RRP7BPQ9NSQ0 103 aa14.52□□□□□ -0.08
TCF4-245ENST00000570177 ROCK1Q13464 1354 aa14.52□□□□□ -0.08
TCF4-245ENST00000570177 CDC42BPBQ9Y5S2 1711 aa14.52□□□□□ -0.08
TCF4-245ENST00000570177 KDM6BO15054 1643 aa14.51□□□□□ -0.09
TCF4-245ENST00000570177 MBD5Q9P267 1494 aa14.51□□□□□ -0.09
TCF4-245ENST00000570177 KCNH8Q96L42 1107 aa14.5□□□□□ -0.09
TCF4-245ENST00000570177 ZNF777Q9ULD5 760 aaPredicted RBP14.5□□□□□ -0.09
TCF4-245ENST00000570177 PREX2Q70Z35 1606 aa14.5□□□□□ -0.09
TCF4-245ENST00000570177 SAMD9LQ8IVG5 1584 aa14.48□□□□□ -0.09
TCF4-245ENST00000570177 GCC2Q8IWJ2 1684 aa14.48□□□□□ -0.09
TCF4-245ENST00000570177 WDR7Q9Y4E6 1490 aa14.48□□□□□ -0.09
TCF4-245ENST00000570177 PLCH2O75038 1416 aa14.47□□□□□ -0.09
TCF4-245ENST00000570177 ADGRL2O95490 1459 aa14.47□□□□□ -0.09
TCF4-245ENST00000570177 NCOA1Q15788 1441 aa14.47□□□□□ -0.09
TCF4-245ENST00000570177 HNRNPMP52272 730 aaKnown RBP eCLIP14.46□□□□□ -0.097e-6■■■□□ 17
TCF4-245ENST00000570177 ASXL2Q76L83 1435 aa14.46□□□□□ -0.09
TCF4-245ENST00000570177 CROCC2H7BZ55 1655 aa14.45□□□□□ -0.1
TCF4-245ENST00000570177 ARHGEF5Q12774 1597 aa14.44□□□□□ -0.1
TCF4-245ENST00000570177 DENND4BO75064 1496 aaPredicted RBP14.44□□□□□ -0.1
TCF4-245ENST00000570177 SHANK2Q9UPX8 1470 aa14.44□□□□□ -0.1
TCF4-245ENST00000570177 ARHGEF12Q9NZN5 1544 aa14.43□□□□□ -0.1
TCF4-245ENST00000570177 ARHGAP5Q13017 1502 aa14.42□□□□□ -0.1
TCF4-245ENST00000570177 DAXXQ9UER7 740 aaPredicted RBP14.42□□□□□ -0.1
TCF4-245ENST00000570177 MYO5CQ9NQX4 1742 aa14.42□□□□□ -0.1
TCF4-245ENST00000570177 KIAA1107Q9UPP5 1409 aa14.42□□□□□ -0.1
TCF4-245ENST00000570177 C9orf84Q5VXU9 1444 aa14.41□□□□□ -0.1
TCF4-245ENST00000570177 ARAP3Q8WWN8 1544 aa14.4□□□□□ -0.1
TCF4-245ENST00000570177 RIMBP3CA6NJZ7 1639 aa14.4□□□□□ -0.1
TCF4-245ENST00000570177 RIMBP3BA6NNM3 1639 aa14.4□□□□□ -0.1
TCF4-245ENST00000570177 RIMBP3Q9UFD9 1639 aa14.4□□□□□ -0.1
TCF4-245ENST00000570177 SYCP2Q9BX26 1530 aa14.4□□□□□ -0.11
TCF4-245ENST00000570177 ABCA9Q8IUA7 1624 aa14.39□□□□□ -0.11
TCF4-245ENST00000570177 ADGBQ8N7X0 1667 aa14.39□□□□□ -0.11
TCF4-245ENST00000570177 CCDC141Q6ZP82 1450 aa14.39□□□□□ -0.11
TCF4-245ENST00000570177 RSPH4AQ5TD94 716 aa14.39□□□□□ -0.11
TCF4-245ENST00000570177 SIN3AQ96ST3 1273 aa14.39□□□□□ -0.11
TCF4-245ENST00000570177 ANKRD30AQ9BXX3 1397 aa14.38□□□□□ -0.11
TCF4-245ENST00000570177 EFCAB2Q5VUJ9 269 aa14.38□□□□□ -0.11
TCF4-245ENST00000570177 PLEKHH2Q8IVE3 1493 aa14.37□□□□□ -0.11
TCF4-245ENST00000570177 CYB5RLQ6IPT4 315 aa14.37□□□□□ -0.11
TCF4-245ENST00000570177 NPM1P06748 294 aaKnown RBP eCLIP14.36□□□□□ -0.11
TCF4-245ENST00000570177 TSPY4P0CV99 314 aa14.36□□□□□ -0.11
TCF4-245ENST00000570177 TSPY10P0CW01 314 aa14.36□□□□□ -0.11
TCF4-245ENST00000570177 MAST1Q9Y2H9 1570 aa14.36□□□□□ -0.11
TCF4-245ENST00000570177 ABCC1P33527 1531 aa14.36□□□□□ -0.11
TCF4-245ENST00000570177 TRAPPC8Q9Y2L5 1435 aa14.35□□□□□ -0.11
TCF4-245ENST00000570177 MPHOSPH9Q99550 1183 aa14.34□□□□□ -0.11
TCF4-245ENST00000570177 ANKRD50Q9ULJ7 1429 aa14.34□□□□□ -0.11
TCF4-245ENST00000570177 PLPPR3Q6T4P5 718 aa14.33□□□□□ -0.11
TCF4-245ENST00000570177 PZPP20742 1482 aa14.33□□□□□ -0.12
TCF4-245ENST00000570177 TRIM52Q96A61 297 aa14.33□□□□□ -0.12
TCF4-245ENST00000570177 KIF15Q9NS87 1388 aa14.33□□□□□ -0.12
TCF4-245ENST00000570177 ACIN1Q9UKV3 1341 aaKnown RBP14.31□□□□□ -0.12
TCF4-245ENST00000570177 FANCAO15360 1455 aa14.31□□□□□ -0.12
TCF4-245ENST00000570177 CENPBP07199 599 aaPredicted RBP14.29□□□□□ -0.12
TCF4-245ENST00000570177 NEUROD1Q13562 356 aa14.29□□□□□ -0.12
TCF4-245ENST00000570177 AFAP1Q8N556 730 aa14.29□□□□□ -0.12
TCF4-245ENST00000570177 ANKRD30BQ9BXX2 1392 aa14.28□□□□□ -0.12
TCF4-245ENST00000570177 PLXNC1O60486 1568 aa14.27□□□□□ -0.12
TCF4-245ENST00000570177 CD109Q6YHK3 1445 aa14.27□□□□□ -0.12
TCF4-245ENST00000570177 RTN4Q9NQC3 1192 aaKnown RBP14.27□□□□□ -0.12
TCF4-245ENST00000570177 TIMELESSQ9UNS1 1208 aa14.27□□□□□ -0.12
TCF4-245ENST00000570177 KDM5DQ9BY66 1539 aa14.26□□□□□ -0.13
TCF4-245ENST00000570177 RTEL1-TNFRSF6BF6WH68 1400 aa14.26□□□□□ -0.13
TCF4-245ENST00000570177 SCAPERQ9BY12 1400 aa14.26□□□□□ -0.13
TCF4-245ENST00000570177 POTEDQ86YR6 584 aa14.25□□□□□ -0.13
TCF4-245ENST00000570177 SLC4A1APQ9BWU0 796 aaKnown RBP14.25□□□□□ -0.13
TCF4-245ENST00000570177 PPP1R15AO75807 674 aaPredicted RBP14.24□□□□□ -0.13
TCF4-245ENST00000570177 ADGRL1O94910 1474 aa14.24□□□□□ -0.13
TCF4-245ENST00000570177 ZNF316A6NFI3 1004 aaPredicted RBP14.23□□□□□ -0.13
TCF4-245ENST00000570177 SPAG9O60271 1321 aaKnown RBP14.23□□□□□ -0.13
TCF4-245ENST00000570177 ZFYVE16Q7Z3T8 1539 aa14.22□□□□□ -0.13
TCF4-245ENST00000570177 NUP155O75694 1391 aa14.22□□□□□ -0.13
TCF4-245ENST00000570177 DUOX2Q9NRD8 1548 aa14.22□□□□□ -0.13
TCF4-245ENST00000570177 GLI2P10070 1586 aa14.21□□□□□ -0.13
TCF4-245ENST00000570177 INO80Q9ULG1 1556 aaPredicted RBP14.21□□□□□ -0.14
TCF4-245ENST00000570177 PKD2Q13563 968 aa14.2□□□□□ -0.14
TCF4-245ENST00000570177 MAP3K4Q9Y6R4 1608 aa14.19□□□□□ -0.14
TCF4-245ENST00000570177 ERBINQ96RT1 1412 aa14.19□□□□□ -0.14
TCF4-245ENST00000570177 UNC13BO14795 1591 aa14.19□□□□□ -0.14
TCF4-245ENST00000570177 MAGI2Q86UL8 1455 aa14.18□□□□□ -0.14
TCF4-245ENST00000570177 NEO1Q92859 1461 aa14.18□□□□□ -0.14
TCF4-245ENST00000570177 ATP7AQ04656 1500 aa14.17□□□□□ -0.14
TCF4-245ENST00000570177 RPRD2Q5VT52 1461 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms