RNA–Protein interactions for RNA: ENST00000570146.3

TCF4-244, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-244ENST00000570146 ZFYVE16Q7Z3T8 1539 aa17.49■□□□□ 0.39
TCF4-244ENST00000570146 RAPGEF6Q8TEU7 1601 aa17.49■□□□□ 0.39
TCF4-244ENST00000570146 CFAP74Q9C0B2 1584 aa17.49■□□□□ 0.39
TCF4-244ENST00000570146 CACNB1Q02641 598 aaPredicted RBP17.47■□□□□ 0.39
TCF4-244ENST00000570146 ZMYM4Q5VZL5 1548 aa17.46■□□□□ 0.39
TCF4-244ENST00000570146 PPP4R3CPQ6ZMV5 832 aa17.45■□□□□ 0.38
TCF4-244ENST00000570146 NUP153P49790 1475 aaKnown RBP17.44■□□□□ 0.38
TCF4-244ENST00000570146 RICTORQ6R327 1708 aa17.44■□□□□ 0.38
TCF4-244ENST00000570146 TTC37Q6PGP7 1564 aa17.43■□□□□ 0.38
TCF4-244ENST00000570146 SPATA31D1Q6ZQQ2 1576 aa17.42■□□□□ 0.38
TCF4-244ENST00000570146 UHRF1BP1Q6BDS2 1440 aa17.41■□□□□ 0.38
TCF4-244ENST00000570146 SAMD9Q5K651 1589 aa17.4■□□□□ 0.38
TCF4-244ENST00000570146 ATP10AO60312 1499 aa17.39■□□□□ 0.37
TCF4-244ENST00000570146 FER1L4A9Z1Z3 1794 aa17.39■□□□□ 0.37
TCF4-244ENST00000570146 DCAF8L1A6NGE4 600 aa17.39■□□□□ 0.37
TCF4-244ENST00000570146 RANGAP1P46060 587 aaPredicted RBP17.39■□□□□ 0.37
TCF4-244ENST00000570146 C9orf84Q5VXU9 1444 aa17.38■□□□□ 0.37
TCF4-244ENST00000570146 SCAPERQ9BY12 1400 aa17.38■□□□□ 0.37
TCF4-244ENST00000570146 CEBPAP49715 358 aaPredicted RBP17.38■□□□□ 0.37
TCF4-244ENST00000570146 PREX1Q8TCU6 1659 aa17.38■□□□□ 0.37
TCF4-244ENST00000570146 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.37■□□□□ 0.37
TCF4-244ENST00000570146 ARHGEF12Q9NZN5 1544 aa17.37■□□□□ 0.37
TCF4-244ENST00000570146 HECW1Q76N89 1606 aa17.36■□□□□ 0.37
TCF4-244ENST00000570146 ESF1Q9H501 851 aaKnown RBP17.36■□□□□ 0.37
TCF4-244ENST00000570146 HOXD11P31277 338 aaPredicted RBP17.35■□□□□ 0.37
TCF4-244ENST00000570146 CSRNP3Q8WYN3 585 aa17.35■□□□□ 0.37
TCF4-244ENST00000570146 PTPRTO14522 1441 aa17.35■□□□□ 0.37
TCF4-244ENST00000570146 EFCAB2Q5VUJ9 269 aa17.34■□□□□ 0.37
TCF4-244ENST00000570146 MYT1LQ9UL68 1186 aa17.34■□□□□ 0.37
TCF4-244ENST00000570146 PLCH2O75038 1416 aa17.33■□□□□ 0.36
TCF4-244ENST00000570146 IQSEC2Q5JU85 1478 aa17.31■□□□□ 0.36
TCF4-244ENST00000570146 SIGLEC1Q9BZZ2 1709 aa17.3■□□□□ 0.36
TCF4-244ENST00000570146 CDK11AQ9UQ88 783 aaPredicted RBP17.29■□□□□ 0.36
TCF4-244ENST00000570146 ZNF518AQ6AHZ1 1483 aa17.27■□□□□ 0.36
TCF4-244ENST00000570146 STRCQ7RTU9 1775 aa17.27■□□□□ 0.35
TCF4-244ENST00000570146 TRAPPC8Q9Y2L5 1435 aa17.24■□□□□ 0.35
TCF4-244ENST00000570146 UBAP1LF5GYI3 381 aa17.23■□□□□ 0.35
TCF4-244ENST00000570146 ATP1B4Q9UN42 357 aaPredicted RBP17.23■□□□□ 0.35
TCF4-244ENST00000570146 AFAP1Q8N556 730 aa17.22■□□□□ 0.35
TCF4-244ENST00000570146 SETD1BQ9UPS6 1966 aaKnown RBP17.22■□□□□ 0.35
TCF4-244ENST00000570146 CNKSR2Q8WXI2 1034 aa17.21■□□□□ 0.35
TCF4-244ENST00000570146 LTBP4Q8N2S1 1624 aa17.2■□□□□ 0.34
TCF4-244ENST00000570146 NCOA1Q15788 1441 aa17.2■□□□□ 0.34
TCF4-244ENST00000570146 CDK13Q14004 1512 aaKnown RBP17.19■□□□□ 0.34
TCF4-244ENST00000570146 CNTLNQ9NXG0 1405 aa17.19■□□□□ 0.34
TCF4-244ENST00000570146 RNF39Q9H2S5 420 aa17.18■□□□□ 0.34
TCF4-244ENST00000570146 EEA1Q15075 1411 aa17.18■□□□□ 0.34
TCF4-244ENST00000570146 ARHGAP5Q13017 1502 aa17.16■□□□□ 0.34
TCF4-244ENST00000570146 REREQ9P2R6 1566 aa17.15■□□□□ 0.34
TCF4-244ENST00000570146 CLIP1P30622 1438 aa17.15■□□□□ 0.34
TCF4-244ENST00000570146 RNF216Q9NWF9 866 aaPredicted RBP17.15■□□□□ 0.34
TCF4-244ENST00000570146 KDM5CP41229 1560 aa17.15■□□□□ 0.34
TCF4-244ENST00000570146 FMN1Q68DA7 1419 aa17.13■□□□□ 0.33
TCF4-244ENST00000570146 MYO5CQ9NQX4 1742 aa17.13■□□□□ 0.33
TCF4-244ENST00000570146 MLH3Q9UHC1 1453 aa17.13■□□□□ 0.33
TCF4-244ENST00000570146 AGLP35573 1532 aa17.13■□□□□ 0.33
TCF4-244ENST00000570146 PKD2Q13563 968 aa17.13■□□□□ 0.33
TCF4-244ENST00000570146 DIP2CQ9Y2E4 1556 aa17.12■□□□□ 0.33
TCF4-244ENST00000570146 ZNF335Q9H4Z2 1342 aaPredicted RBP17.12■□□□□ 0.33
TCF4-244ENST00000570146 NPATQ14207 1427 aa17.12■□□□□ 0.33
TCF4-244ENST00000570146 KIF14Q15058 1648 aa17.11■□□□□ 0.33
TCF4-244ENST00000570146 C3P01024 1663 aa17.11■□□□□ 0.33
TCF4-244ENST00000570146 NCKAP5LQ9HCH0 1330 aa17.1■□□□□ 0.33
TCF4-244ENST00000570146 TROQ12816 1431 aaPredicted RBP17.1■□□□□ 0.33
TCF4-244ENST00000570146 CAMSAP1Q5T5Y3 1602 aa17.1■□□□□ 0.33
TCF4-244ENST00000570146 ZMYM3Q14202 1370 aa17.06■□□□□ 0.32
TCF4-244ENST00000570146 TOM1O60784 492 aa17.06■□□□□ 0.32
TCF4-244ENST00000570146 ABCA6Q8N139 1617 aa17.05■□□□□ 0.32
TCF4-244ENST00000570146 PLA2R1Q13018 1463 aa17.04■□□□□ 0.32
TCF4-244ENST00000570146 UBTFP17480 764 aaKnown RBP17.03■□□□□ 0.32
TCF4-244ENST00000570146 PIP4K2BP78356 416 aa17.03■□□□□ 0.32
TCF4-244ENST00000570146 HSPA1LP34931 641 aa17.02■□□□□ 0.32
TCF4-244ENST00000570146 ABCC1P33527 1531 aa16.99■□□□□ 0.31
TCF4-244ENST00000570146 SPAG9O60271 1321 aaKnown RBP16.98■□□□□ 0.31
TCF4-244ENST00000570146 MED1Q15648 1581 aaPredicted RBP16.98■□□□□ 0.31
TCF4-244ENST00000570146 TCOF1Q13428 1488 aaKnown RBP16.97■□□□□ 0.31
TCF4-244ENST00000570146 MROH2AA6NES4 1674 aa16.97■□□□□ 0.31
TCF4-244ENST00000570146 ZNF777Q9ULD5 760 aaPredicted RBP16.96■□□□□ 0.31
TCF4-244ENST00000570146 GGT6Q6P531 493 aa16.94■□□□□ 0.3
TCF4-244ENST00000570146 CEP170BQ9Y4F5 1589 aaPredicted RBP16.94■□□□□ 0.3
TCF4-244ENST00000570146 PTPRKQ15262 1439 aa16.93■□□□□ 0.3
TCF4-244ENST00000570146 ARHGAP35Q9NRY4 1499 aa16.93■□□□□ 0.3
TCF4-244ENST00000570146 PREX2Q70Z35 1606 aa16.92■□□□□ 0.3
TCF4-244ENST00000570146 CPS1P31327 1500 aa16.92■□□□□ 0.3
TCF4-244ENST00000570146 EHMT2Q96KQ7 1210 aa16.92■□□□□ 0.3
TCF4-244ENST00000570146 KIDINS220Q9ULH0 1771 aa16.92■□□□□ 0.3
TCF4-244ENST00000570146 ITSN2Q9NZM3 1697 aa16.91■□□□□ 0.3
TCF4-244ENST00000570146 CDC42BPBQ9Y5S2 1711 aa16.91■□□□□ 0.3
TCF4-244ENST00000570146 C1QBPQ07021 282 aaKnown RBP16.91■□□□□ 0.3
TCF4-244ENST00000570146 MYO3AQ8NEV4 1616 aa16.91■□□□□ 0.3
TCF4-244ENST00000570146 CCDC18Q5T9S5 1454 aa16.91■□□□□ 0.3
TCF4-244ENST00000570146 ZNF142P52746 1687 aaPredicted RBP16.9■□□□□ 0.3
TCF4-244ENST00000570146 SAMD9LQ8IVG5 1584 aa16.89■□□□□ 0.3
TCF4-244ENST00000570146 A2MP01023 1474 aa16.88■□□□□ 0.29
TCF4-244ENST00000570146 HNRNPMP52272 730 aaKnown RBP eCLIP16.88■□□□□ 0.29
TCF4-244ENST00000570146 A2ML1A8K2U0 1454 aa16.87■□□□□ 0.29
TCF4-244ENST00000570146 SHANK2Q9UPX8 1470 aa16.87■□□□□ 0.29
TCF4-244ENST00000570146 ANKLE2Q86XL3 938 aa16.86■□□□□ 0.29
TCF4-244ENST00000570146 PLEKHH2Q8IVE3 1493 aa16.86■□□□□ 0.29
TCF4-244ENST00000570146 CLTCQ00610 1675 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms