RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 NAIPQ13075 1403 aa16.13■□□□□ 0.17
PDXDC1-217ENST00000570001 TROQ12816 1431 aaPredicted RBP16.13■□□□□ 0.17
PDXDC1-217ENST00000570001 HNRNPMP52272 730 aaKnown RBP eCLIP16.13■□□□□ 0.17
PDXDC1-217ENST00000570001 PKD2Q13563 968 aa16.13■□□□□ 0.17
PDXDC1-217ENST00000570001 UGGT2Q9NYU1 1516 aa16.12■□□□□ 0.17
PDXDC1-217ENST00000570001 EIF4G3O43432 1585 aaKnown RBP16.12■□□□□ 0.17
PDXDC1-217ENST00000570001 L3MBTL2Q969R5 705 aa16.11■□□□□ 0.17
PDXDC1-217ENST00000570001 PLB1Q6P1J6 1458 aa16.1■□□□□ 0.17
PDXDC1-217ENST00000570001 HSPA5P11021 654 aaKnown RBP16.09■□□□□ 0.17
PDXDC1-217ENST00000570001 NUP155O75694 1391 aa16.09■□□□□ 0.17
PDXDC1-217ENST00000570001 PTPRKQ15262 1439 aa16.07■□□□□ 0.16
PDXDC1-217ENST00000570001 MAPKBP1O60336 1514 aa16.06■□□□□ 0.16
PDXDC1-217ENST00000570001 DAPK1P53355 1430 aa16.06■□□□□ 0.16
PDXDC1-217ENST00000570001 KIAA0556O60303 1618 aa16.06■□□□□ 0.16
PDXDC1-217ENST00000570001 RSPH4AQ5TD94 716 aa16.05■□□□□ 0.16
PDXDC1-217ENST00000570001 HNRNPUQ00839 825 aaKnown RBP eCLIP16.05■□□□□ 0.16
PDXDC1-217ENST00000570001 RGL3Q3MIN7 710 aa16.04■□□□□ 0.16
PDXDC1-217ENST00000570001 BCANQ96GW7 911 aa16.04■□□□□ 0.16
PDXDC1-217ENST00000570001 NUP153P49790 1475 aaKnown RBP16.03■□□□□ 0.16
PDXDC1-217ENST00000570001 RAPGEF6Q8TEU7 1601 aa16.03■□□□□ 0.16
PDXDC1-217ENST00000570001 EFCAB2Q5VUJ9 269 aa16.02■□□□□ 0.16
PDXDC1-217ENST00000570001 DISP1Q96F81 1524 aa16.02■□□□□ 0.16
PDXDC1-217ENST00000570001 CARD11Q9BXL7 1154 aa16.01■□□□□ 0.15
PDXDC1-217ENST00000570001 FAM9BQ8IZU0 186 aa16■□□□□ 0.15
PDXDC1-217ENST00000570001 ROCK1Q13464 1354 aa16■□□□□ 0.15
PDXDC1-217ENST00000570001 CCER2I3L3R5 266 aa16■□□□□ 0.15
PDXDC1-217ENST00000570001 DCAF11Q8TEB1 546 aa15.99■□□□□ 0.15
PDXDC1-217ENST00000570001 MRS2Q9HD23 443 aa15.99■□□□□ 0.15
PDXDC1-217ENST00000570001 ABCC5O15440 1437 aa15.99■□□□□ 0.15
PDXDC1-217ENST00000570001 ANKRD50Q9ULJ7 1429 aa15.98■□□□□ 0.15
PDXDC1-217ENST00000570001 TCOF1Q13428 1488 aaKnown RBP15.96■□□□□ 0.15
PDXDC1-217ENST00000570001 MAGI3Q5TCQ9 1506 aa15.96■□□□□ 0.15
PDXDC1-217ENST00000570001 CAMSAP2Q08AD1 1489 aa15.96■□□□□ 0.15
PDXDC1-217ENST00000570001 KIF15Q9NS87 1388 aa15.95■□□□□ 0.14
PDXDC1-217ENST00000570001 NUP160Q12769 1436 aa15.95■□□□□ 0.14
PDXDC1-217ENST00000570001 FKBP8Q14318 412 aa15.95■□□□□ 0.14
PDXDC1-217ENST00000570001 AKNAQ7Z591 1439 aa15.94■□□□□ 0.14
PDXDC1-217ENST00000570001 ARHGEF11O15085 1522 aa15.92■□□□□ 0.14
PDXDC1-217ENST00000570001 C9orf84Q5VXU9 1444 aa15.92■□□□□ 0.14
PDXDC1-217ENST00000570001 CEP170Q5SW79 1584 aa15.92■□□□□ 0.14
PDXDC1-217ENST00000570001 CHGAP10645 457 aaKnown RBP15.91■□□□□ 0.14
PDXDC1-217ENST00000570001 KIF14Q15058 1648 aa15.91■□□□□ 0.14
PDXDC1-217ENST00000570001 GPATCH8Q9UKJ3 1502 aaKnown RBP15.91■□□□□ 0.14
PDXDC1-217ENST00000570001 ARHGAP5Q13017 1502 aa15.89■□□□□ 0.13
PDXDC1-217ENST00000570001 SPAG9O60271 1321 aaKnown RBP15.88■□□□□ 0.13
PDXDC1-217ENST00000570001 ATP10BO94823 1461 aa15.88■□□□□ 0.13
PDXDC1-217ENST00000570001 TMC1Q8TDI8 760 aa15.88■□□□□ 0.13
PDXDC1-217ENST00000570001 NCOA1Q15788 1441 aa15.88■□□□□ 0.13
PDXDC1-217ENST00000570001 KIAA1107Q9UPP5 1409 aa15.86■□□□□ 0.13
PDXDC1-217ENST00000570001 ANKRD30BQ9BXX2 1392 aa15.85■□□□□ 0.13
PDXDC1-217ENST00000570001 KANK1Q14678 1352 aa15.84■□□□□ 0.13
PDXDC1-217ENST00000570001 CCDC144AA2RUR9 1427 aa15.84■□□□□ 0.13
PDXDC1-217ENST00000570001 ITSN2Q9NZM3 1697 aa15.84■□□□□ 0.13
PDXDC1-217ENST00000570001 ROCK2O75116 1388 aaKnown RBP15.83■□□□□ 0.12
PDXDC1-217ENST00000570001 OSCARQ8IYS5 282 aa15.82■□□□□ 0.12
PDXDC1-217ENST00000570001 NBPF8Q3BBV2 869 aa15.82■□□□□ 0.12
PDXDC1-217ENST00000570001 WASHC2AQ641Q2 1341 aa15.81■□□□□ 0.12
PDXDC1-217ENST00000570001 SUPT16HQ9Y5B9 1047 aaKnown RBP15.81■□□□□ 0.12
PDXDC1-217ENST00000570001 USP47Q96K76 1375 aa15.8■□□□□ 0.12
PDXDC1-217ENST00000570001 CCDC141Q6ZP82 1450 aa15.8■□□□□ 0.12
PDXDC1-217ENST00000570001 KIF3BO15066 747 aa15.79■□□□□ 0.12
PDXDC1-217ENST00000570001 DNMT1P26358 1616 aaKnown RBP15.79■□□□□ 0.12
PDXDC1-217ENST00000570001 PLEKHH2Q8IVE3 1493 aa15.79■□□□□ 0.12
PDXDC1-217ENST00000570001 CCDC7Q96M83 1385 aa15.78■□□□□ 0.12
PDXDC1-217ENST00000570001 RPRD2Q5VT52 1461 aaKnown RBP15.77■□□□□ 0.11
PDXDC1-217ENST00000570001 LRRIQ1Q96JM4 1722 aa15.76■□□□□ 0.11
PDXDC1-217ENST00000570001 ST20-MTHFSA0A0A6YYL1 179 aa15.75■□□□□ 0.11
PDXDC1-217ENST00000570001 AFAP1Q8N556 730 aa15.75■□□□□ 0.11
PDXDC1-217ENST00000570001 KIF7Q2M1P5 1343 aa15.75■□□□□ 0.11
PDXDC1-217ENST00000570001 PRKRIP1Q9H875 184 aaPredicted RBP15.74■□□□□ 0.11
PDXDC1-217ENST00000570001 GCC2Q8IWJ2 1684 aa15.73■□□□□ 0.11
PDXDC1-217ENST00000570001 CNTLNQ9NXG0 1405 aa15.73■□□□□ 0.11
PDXDC1-217ENST00000570001 TMF1P82094 1093 aa15.73■□□□□ 0.11
PDXDC1-217ENST00000570001 IRX6P78412 446 aaPredicted RBP15.72■□□□□ 0.11
PDXDC1-217ENST00000570001 GGT6Q6P531 493 aa15.72■□□□□ 0.11
PDXDC1-217ENST00000570001 SALL2Q9Y467 1007 aaPredicted RBP15.72■□□□□ 0.11
PDXDC1-217ENST00000570001 CDCA8Q53HL2 280 aa15.71■□□□□ 0.11
PDXDC1-217ENST00000570001 ABCA8O94911 1581 aa15.7■□□□□ 0.1
PDXDC1-217ENST00000570001 ERICH6Q7L0X2 663 aa15.7■□□□□ 0.1
PDXDC1-217ENST00000570001 STAG3Q9UJ98 1225 aa15.69■□□□□ 0.1
PDXDC1-217ENST00000570001 SENP3-EIF4A1A0A087X0R7 540 aa15.69■□□□□ 0.1
PDXDC1-217ENST00000570001 KNSTRNQ9Y448 316 aa15.67■□□□□ 0.1
PDXDC1-217ENST00000570001 KDM6BO15054 1643 aa15.67■□□□□ 0.1
PDXDC1-217ENST00000570001 ADGRL2O95490 1459 aa15.66■□□□□ 0.1
PDXDC1-217ENST00000570001 SHANK2Q9UPX8 1470 aa15.66■□□□□ 0.1
PDXDC1-217ENST00000570001 CC2D1BQ5T0F9 858 aaKnown RBP15.66■□□□□ 0.1
PDXDC1-217ENST00000570001 ESF1Q9H501 851 aaKnown RBP15.65■□□□□ 0.1
PDXDC1-217ENST00000570001 ABCC2Q92887 1545 aa15.65■□□□□ 0.1
PDXDC1-217ENST00000570001 ARID4BQ4LE39 1312 aaPredicted RBP15.65■□□□□ 0.1
PDXDC1-217ENST00000570001 SYCP2Q9BX26 1530 aa15.64■□□□□ 0.09
PDXDC1-217ENST00000570001 PZPP20742 1482 aa15.64■□□□□ 0.09
PDXDC1-217ENST00000570001 C11orf95C9JLR9 678 aaPredicted RBP15.64■□□□□ 0.09
PDXDC1-217ENST00000570001 ABCC10Q5T3U5 1492 aa15.64■□□□□ 0.09
PDXDC1-217ENST00000570001 WDR43Q15061 677 aaKnown RBP eCLIP15.63■□□□□ 0.09
PDXDC1-217ENST00000570001 KTN1Q86UP2 1357 aaKnown RBP15.63■□□□□ 0.09
PDXDC1-217ENST00000570001 RALBP1Q15311 655 aa15.63■□□□□ 0.09
PDXDC1-217ENST00000570001 CHD1O14646 1710 aa15.62■□□□□ 0.09
PDXDC1-217ENST00000570001 PLCH2O75038 1416 aa15.61■□□□□ 0.09
PDXDC1-217ENST00000570001 SENP3Q9H4L4 574 aaPredicted RBP15.61■□□□□ 0.09
PDXDC1-217ENST00000570001 SCAPERQ9BY12 1400 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms