RNA–Protein interactions for RNA: ENST00000569804.2

LPCAT4-208, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 657 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-208ENST00000569804 PREX1Q8TCU6 1659 aa18.12■□□□□ 0.49
LPCAT4-208ENST00000569804 MYO5CQ9NQX4 1742 aa18.12■□□□□ 0.49
LPCAT4-208ENST00000569804 SCAPERQ9BY12 1400 aa18.12■□□□□ 0.49
LPCAT4-208ENST00000569804 KIF14Q15058 1648 aa18.1■□□□□ 0.49
LPCAT4-208ENST00000569804 C9orf84Q5VXU9 1444 aa18.1■□□□□ 0.49
LPCAT4-208ENST00000569804 KDM5CP41229 1560 aa18.09■□□□□ 0.49
LPCAT4-208ENST00000569804 ATP10AO60312 1499 aa18.09■□□□□ 0.49
LPCAT4-208ENST00000569804 STRCQ7RTU9 1775 aa18.08■□□□□ 0.48
LPCAT4-208ENST00000569804 LRRIQ1Q96JM4 1722 aa18.06■□□□□ 0.48
LPCAT4-208ENST00000569804 PLPPR3Q6T4P5 718 aa18.05■□□□□ 0.48
LPCAT4-208ENST00000569804 CERKQ8TCT0 537 aa18.05■□□□□ 0.48
LPCAT4-208ENST00000569804 DIP2CQ9Y2E4 1556 aa18.04■□□□□ 0.48
LPCAT4-208ENST00000569804 ARHGAP35Q9NRY4 1499 aa18.04■□□□□ 0.48
LPCAT4-208ENST00000569804 MLECQ14165 292 aa18.04■□□□□ 0.48
LPCAT4-208ENST00000569804 REREQ9P2R6 1566 aa18.04■□□□□ 0.48
LPCAT4-208ENST00000569804 ZNF518AQ6AHZ1 1483 aa18.03■□□□□ 0.48
LPCAT4-208ENST00000569804 FMN1Q68DA7 1419 aa18.02■□□□□ 0.48
LPCAT4-208ENST00000569804 ABCA6Q8N139 1617 aa18.01■□□□□ 0.47
LPCAT4-208ENST00000569804 CDC42BPBQ9Y5S2 1711 aa18.01■□□□□ 0.47
LPCAT4-208ENST00000569804 TROQ12816 1431 aaPredicted RBP17.99■□□□□ 0.47
LPCAT4-208ENST00000569804 C3P01024 1663 aa17.99■□□□□ 0.47
LPCAT4-208ENST00000569804 SETD1BQ9UPS6 1966 aaKnown RBP17.99■□□□□ 0.47
LPCAT4-208ENST00000569804 CEBPAP49715 358 aaPredicted RBP17.98■□□□□ 0.47
LPCAT4-208ENST00000569804 ARHGAP5Q13017 1502 aa17.98■□□□□ 0.47
LPCAT4-208ENST00000569804 EFCAB2Q5VUJ9 269 aa17.97■□□□□ 0.47
LPCAT4-208ENST00000569804 PREX2Q70Z35 1606 aa17.96■□□□□ 0.47
LPCAT4-208ENST00000569804 ABCC1P33527 1531 aa17.96■□□□□ 0.47
LPCAT4-208ENST00000569804 MLH3Q9UHC1 1453 aa17.95■□□□□ 0.46
LPCAT4-208ENST00000569804 AGLP35573 1532 aa17.95■□□□□ 0.46
LPCAT4-208ENST00000569804 ITSN2Q9NZM3 1697 aa17.94■□□□□ 0.46
LPCAT4-208ENST00000569804 AFAP1Q8N556 730 aa17.94■□□□□ 0.46
LPCAT4-208ENST00000569804 UHRF1BP1Q6BDS2 1440 aa17.94■□□□□ 0.46
LPCAT4-208ENST00000569804 KIDINS220Q9ULH0 1771 aa17.92■□□□□ 0.46
LPCAT4-208ENST00000569804 TRAPPC8Q9Y2L5 1435 aa17.91■□□□□ 0.46
LPCAT4-208ENST00000569804 CLIP1P30622 1438 aa17.9■□□□□ 0.46
LPCAT4-208ENST00000569804 LTBP4Q8N2S1 1624 aa17.9■□□□□ 0.46
LPCAT4-208ENST00000569804 PTPRTO14522 1441 aa17.89■□□□□ 0.46
LPCAT4-208ENST00000569804 CDC42BPAQ5VT25 1732 aa17.89■□□□□ 0.45
LPCAT4-208ENST00000569804 CDK11AQ9UQ88 783 aaPredicted RBP17.88■□□□□ 0.45
LPCAT4-208ENST00000569804 ATP1B4Q9UN42 357 aaPredicted RBP17.86■□□□□ 0.45
LPCAT4-208ENST00000569804 NCOA1Q15788 1441 aa17.85■□□□□ 0.45
LPCAT4-208ENST00000569804 ILDR2Q71H61 639 aa17.85■□□□□ 0.45
LPCAT4-208ENST00000569804 MROH2AA6NES4 1674 aa17.84■□□□□ 0.45
LPCAT4-208ENST00000569804 UBTFP17480 764 aaKnown RBP17.84■□□□□ 0.45
LPCAT4-208ENST00000569804 DMRT2Q9Y5R5 561 aa17.84■□□□□ 0.45
LPCAT4-208ENST00000569804 CCDC18Q5T9S5 1454 aa17.83■□□□□ 0.45
LPCAT4-208ENST00000569804 SPATA31D1Q6ZQQ2 1576 aa17.83■□□□□ 0.44
LPCAT4-208ENST00000569804 SAMD9LQ8IVG5 1584 aa17.83■□□□□ 0.44
LPCAT4-208ENST00000569804 CASKIN1Q8WXD9 1431 aa17.82■□□□□ 0.44
LPCAT4-208ENST00000569804 EHMT2Q96KQ7 1210 aa17.82■□□□□ 0.44
LPCAT4-208ENST00000569804 IQSEC2Q5JU85 1478 aa17.82■□□□□ 0.44
LPCAT4-208ENST00000569804 DISP3Q9P2K9 1392 aa17.81■□□□□ 0.44
LPCAT4-208ENST00000569804 CNTLNQ9NXG0 1405 aa17.81■□□□□ 0.44
LPCAT4-208ENST00000569804 PLXNC1O60486 1568 aa17.79■□□□□ 0.44
LPCAT4-208ENST00000569804 SYCP2Q9BX26 1530 aa17.78■□□□□ 0.44
LPCAT4-208ENST00000569804 ZNF142P52746 1687 aaPredicted RBP17.78■□□□□ 0.44
LPCAT4-208ENST00000569804 NPATQ14207 1427 aa17.78■□□□□ 0.44
LPCAT4-208ENST00000569804 CAMSAP1Q5T5Y3 1602 aa17.77■□□□□ 0.44
LPCAT4-208ENST00000569804 INO80Q9ULG1 1556 aaPredicted RBP17.77■□□□□ 0.44
LPCAT4-208ENST00000569804 MYO3AQ8NEV4 1616 aa17.76■□□□□ 0.43
LPCAT4-208ENST00000569804 FYCO1Q9BQS8 1478 aa17.75■□□□□ 0.43
LPCAT4-208ENST00000569804 MYT1LQ9UL68 1186 aa17.75■□□□□ 0.43
LPCAT4-208ENST00000569804 SUPT6HQ7KZ85 1726 aaKnown RBP17.75■□□□□ 0.43
LPCAT4-208ENST00000569804 GPATCH8Q9UKJ3 1502 aaKnown RBP17.74■□□□□ 0.43
LPCAT4-208ENST00000569804 SOCS7O14512 581 aa17.74■□□□□ 0.43
LPCAT4-208ENST00000569804 ATP7AQ04656 1500 aa17.73■□□□□ 0.43
LPCAT4-208ENST00000569804 CLTCQ00610 1675 aaKnown RBP17.73■□□□□ 0.43
LPCAT4-208ENST00000569804 PLA2R1Q13018 1463 aa17.7■□□□□ 0.42
LPCAT4-208ENST00000569804 TCOF1Q13428 1488 aaKnown RBP17.7■□□□□ 0.42
LPCAT4-208ENST00000569804 ZMYM3Q14202 1370 aa17.7■□□□□ 0.42
LPCAT4-208ENST00000569804 CEP170BQ9Y4F5 1589 aaPredicted RBP17.7■□□□□ 0.42
LPCAT4-208ENST00000569804 CHIC1Q5VXU3 224 aa17.69■□□□□ 0.42
LPCAT4-208ENST00000569804 PTPRKQ15262 1439 aa17.68■□□□□ 0.42
LPCAT4-208ENST00000569804 ESF1Q9H501 851 aaKnown RBP17.68■□□□□ 0.42
LPCAT4-208ENST00000569804 KIAA1107Q9UPP5 1409 aa17.68■□□□□ 0.42
LPCAT4-208ENST00000569804 A2MP01023 1474 aa17.67■□□□□ 0.42
LPCAT4-208ENST00000569804 SPAG9O60271 1321 aaKnown RBP17.65■□□□□ 0.42
LPCAT4-208ENST00000569804 ZNF335Q9H4Z2 1342 aaPredicted RBP17.65■□□□□ 0.42
LPCAT4-208ENST00000569804 ADGBQ8N7X0 1667 aa17.64■□□□□ 0.42
LPCAT4-208ENST00000569804 PLEKHH2Q8IVE3 1493 aa17.64■□□□□ 0.41
LPCAT4-208ENST00000569804 HNRNPMP52272 730 aaKnown RBP eCLIP17.63■□□□□ 0.41
LPCAT4-208ENST00000569804 NCKAP5LQ9HCH0 1330 aa17.63■□□□□ 0.41
LPCAT4-208ENST00000569804 ZNF777Q9ULD5 760 aaPredicted RBP17.62■□□□□ 0.41
LPCAT4-208ENST00000569804 TIAM1Q13009 1591 aa17.62■□□□□ 0.41
LPCAT4-208ENST00000569804 DNMT1P26358 1616 aaKnown RBP17.61■□□□□ 0.41
LPCAT4-208ENST00000569804 NEURL4Q96JN8 1562 aa17.59■□□□□ 0.41
LPCAT4-208ENST00000569804 MBD5Q9P267 1494 aa17.59■□□□□ 0.41
LPCAT4-208ENST00000569804 PKD2Q13563 968 aa17.58■□□□□ 0.4
LPCAT4-208ENST00000569804 POLR1AO95602 1720 aaPredicted RBP17.58■□□□□ 0.4
LPCAT4-208ENST00000569804 A2ML1A8K2U0 1454 aa17.57■□□□□ 0.4
LPCAT4-208ENST00000569804 CCNB3Q8WWL7 1395 aa17.56■□□□□ 0.4
LPCAT4-208ENST00000569804 CFDP1Q9UEE9 299 aaPredicted RBP17.55■□□□□ 0.4
LPCAT4-208ENST00000569804 EHBP1L1Q8N3D4 1523 aa17.53■□□□□ 0.4
LPCAT4-208ENST00000569804 RTEL1-TNFRSF6BF6WH68 1400 aa17.53■□□□□ 0.4
LPCAT4-208ENST00000569804 ZNF644Q9H582 1327 aaPredicted RBP17.52■□□□□ 0.4
LPCAT4-208ENST00000569804 UBAP1LF5GYI3 381 aa17.52■□□□□ 0.4
LPCAT4-208ENST00000569804 GGT6Q6P531 493 aa17.52■□□□□ 0.4
LPCAT4-208ENST00000569804 PPP6R1Q9UPN7 881 aa17.52■□□□□ 0.4
LPCAT4-208ENST00000569804 FAM135AQ9P2D6 1515 aa17.52■□□□□ 0.39
LPCAT4-208ENST00000569804 ALKQ9UM73 1620 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms