RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 ABCA10Q8WWZ4 1543 aa9.42□□□□□ -0.9
SMG1-217ENST00000569764 NPM3O75607 178 aaKnown RBP9.4□□□□□ -0.9
SMG1-217ENST00000569764 VPS8Q8N3P4 1428 aa9.4□□□□□ -0.9
SMG1-217ENST00000569764 ARHGAP35Q9NRY4 1499 aa9.4□□□□□ -0.9
SMG1-217ENST00000569764 ZNF526Q8TF50 670 aaPredicted RBP9.4□□□□□ -0.9
SMG1-217ENST00000569764 ARID3CA6NKF2 412 aa9.4□□□□□ -0.91
SMG1-217ENST00000569764 RSPH4AQ5TD94 716 aa9.4□□□□□ -0.91
SMG1-217ENST00000569764 ZBTB7CA1YPR0 619 aa9.39□□□□□ -0.91
SMG1-217ENST00000569764 ZNF428Q96B54 188 aa9.39□□□□□ -0.91
SMG1-217ENST00000569764 TARBP1Q13395 1621 aaKnown RBP9.39□□□□□ -0.91
SMG1-217ENST00000569764 KIAA0586Q9BVV6 1533 aa9.38□□□□□ -0.91
SMG1-217ENST00000569764 ABCA5Q8WWZ7 1642 aa9.37□□□□□ -0.91
SMG1-217ENST00000569764 KANK4Q5T7N3 995 aaPredicted RBP9.37□□□□□ -0.91
SMG1-217ENST00000569764 GRIN2AQ12879 1464 aa9.37□□□□□ -0.91
SMG1-217ENST00000569764 ARHGEF11O15085 1522 aa9.37□□□□□ -0.91
SMG1-217ENST00000569764 THOC2Q8NI27 1593 aaKnown RBP9.37□□□□□ -0.91
SMG1-217ENST00000569764 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.36□□□□□ -0.91
SMG1-217ENST00000569764 SCAF1Q9H7N4 1312 aaKnown RBP9.36□□□□□ -0.91
SMG1-217ENST00000569764 TSHZ2Q9NRE2 1034 aa9.36□□□□□ -0.91
SMG1-217ENST00000569764 MTUS2Q5JR59 1369 aa9.35□□□□□ -0.91
SMG1-217ENST00000569764 MLECQ14165 292 aa9.34□□□□□ -0.91
SMG1-217ENST00000569764 PPP1R15AO75807 674 aaPredicted RBP9.34□□□□□ -0.91
SMG1-217ENST00000569764 ZNF326Q5BKZ1 582 aaKnown RBP9.34□□□□□ -0.91
SMG1-217ENST00000569764 BRPF3Q9ULD4 1205 aa9.34□□□□□ -0.91
SMG1-217ENST00000569764 FMN1Q68DA7 1419 aa9.33□□□□□ -0.92
SMG1-217ENST00000569764 UACAQ9BZF9 1416 aa9.33□□□□□ -0.92
SMG1-217ENST00000569764 ZNF608Q9ULD9 1512 aaPredicted RBP9.33□□□□□ -0.92
SMG1-217ENST00000569764 EID1Q9Y6B2 187 aa9.33□□□□□ -0.92
SMG1-217ENST00000569764 CFDP1Q9UEE9 299 aaPredicted RBP9.32□□□□□ -0.92
SMG1-217ENST00000569764 KANK1Q14678 1352 aa9.32□□□□□ -0.92
SMG1-217ENST00000569764 USP35Q9P2H5 1018 aa9.31□□□□□ -0.92
SMG1-217ENST00000569764 ZNF592Q92610 1267 aa9.31□□□□□ -0.92
SMG1-217ENST00000569764 NECTIN2Q92692 538 aa9.31□□□□□ -0.92
SMG1-217ENST00000569764 RBM25P49756 843 aaKnown RBP9.29□□□□□ -0.92
SMG1-217ENST00000569764 PBRM1Q86U86 1689 aa9.29□□□□□ -0.92
SMG1-217ENST00000569764 ZFP91Q96JP5 570 aaPredicted RBP9.29□□□□□ -0.92
SMG1-217ENST00000569764 CUL7Q14999 1698 aa9.29□□□□□ -0.92
SMG1-217ENST00000569764 CTTNBP2Q8WZ74 1663 aa9.29□□□□□ -0.92
SMG1-217ENST00000569764 DCAF8L1A6NGE4 600 aa9.29□□□□□ -0.92
SMG1-217ENST00000569764 BCCIPQ9P287 314 aaKnown RBP eCLIP9.28□□□□□ -0.92
SMG1-217ENST00000569764 LRRIQ1Q96JM4 1722 aa9.28□□□□□ -0.92
SMG1-217ENST00000569764 FHOD3Q2V2M9 1422 aa9.27□□□□□ -0.92
SMG1-217ENST00000569764 CD109Q6YHK3 1445 aa9.27□□□□□ -0.92
SMG1-217ENST00000569764 RAD21O60216 631 aa9.27□□□□□ -0.93
SMG1-217ENST00000569764 PRDM10Q9NQV6 1147 aa9.27□□□□□ -0.93
SMG1-217ENST00000569764 AKNAQ7Z591 1439 aa9.27□□□□□ -0.93
SMG1-217ENST00000569764 CCNB3Q8WWL7 1395 aa9.26□□□□□ -0.93
SMG1-217ENST00000569764 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.26□□□□□ -0.93
SMG1-217ENST00000569764 EIF4G3O43432 1585 aaKnown RBP9.26□□□□□ -0.93
SMG1-217ENST00000569764 PCF11O94913 1555 aaKnown RBP9.25□□□□□ -0.93
SMG1-217ENST00000569764 SPAG9O60271 1321 aaKnown RBP9.25□□□□□ -0.93
SMG1-217ENST00000569764 CLSPNQ9HAW4 1339 aa9.25□□□□□ -0.93
SMG1-217ENST00000569764 CWC22Q9HCG8 908 aaKnown RBP9.25□□□□□ -0.93
SMG1-217ENST00000569764 FOXD4L5Q5VV16 416 aaPredicted RBP9.24□□□□□ -0.93
SMG1-217ENST00000569764 FOXD4L4Q8WXT5 416 aaPredicted RBP9.24□□□□□ -0.93
SMG1-217ENST00000569764 PUS7Q96PZ0 661 aaKnown RBP9.24□□□□□ -0.93
SMG1-217ENST00000569764 PPM1GO15355 546 aaPredicted RBP9.24□□□□□ -0.93
SMG1-217ENST00000569764 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.23□□□□□ -0.93
SMG1-217ENST00000569764 KCTD17Q8N5Z5 321 aa9.22□□□□□ -0.93
SMG1-217ENST00000569764 ADAMTS12P58397 1594 aa9.22□□□□□ -0.93
SMG1-217ENST00000569764 CHGAP10645 457 aaKnown RBP9.22□□□□□ -0.93
SMG1-217ENST00000569764 TIAM1Q13009 1591 aa9.22□□□□□ -0.93
SMG1-217ENST00000569764 NUP160Q12769 1436 aa9.21□□□□□ -0.93
SMG1-217ENST00000569764 AAMPQ13685 434 aa9.21□□□□□ -0.93
SMG1-217ENST00000569764 ANP32EQ9BTT0 268 aa9.21□□□□□ -0.93
SMG1-217ENST00000569764 SAMD9Q5K651 1589 aa9.21□□□□□ -0.94
SMG1-217ENST00000569764 TOM1O60784 492 aa9.2□□□□□ -0.94
SMG1-217ENST00000569764 THEMISQ8N1K5 641 aaPredicted RBP9.2□□□□□ -0.94
SMG1-217ENST00000569764 FAM50AQ14320 339 aaKnown RBP9.2□□□□□ -0.94
SMG1-217ENST00000569764 PSMD1Q99460 953 aa9.2□□□□□ -0.94
SMG1-217ENST00000569764 CCER1Q8TC90 406 aaPredicted RBP9.19□□□□□ -0.94
SMG1-217ENST00000569764 CCDC18Q5T9S5 1454 aa9.19□□□□□ -0.94
SMG1-217ENST00000569764 PLEKHH2Q8IVE3 1493 aa9.19□□□□□ -0.94
SMG1-217ENST00000569764 TMED8Q6PL24 325 aaPredicted RBP9.19□□□□□ -0.94
SMG1-217ENST00000569764 GGT6Q6P531 493 aa9.18□□□□□ -0.94
SMG1-217ENST00000569764 CFAP43Q8NDM7 1665 aa9.18□□□□□ -0.94
SMG1-217ENST00000569764 RBM10P98175 930 aaKnown RBP9.17□□□□□ -0.94
SMG1-217ENST00000569764 LRRC9Q6ZRR7 1453 aa9.17□□□□□ -0.94
SMG1-217ENST00000569764 DENND4BO75064 1496 aaPredicted RBP9.17□□□□□ -0.94
SMG1-217ENST00000569764 DEKP35659 375 aaKnown RBP9.16□□□□□ -0.94
SMG1-217ENST00000569764 RRBP1Q9P2E9 1410 aaKnown RBP9.16□□□□□ -0.94
SMG1-217ENST00000569764 ASXL2Q76L83 1435 aa9.16□□□□□ -0.94
SMG1-217ENST00000569764 SALL2Q9Y467 1007 aaPredicted RBP9.16□□□□□ -0.94
SMG1-217ENST00000569764 EFCAB5A4FU69 1503 aa9.15□□□□□ -0.94
SMG1-217ENST00000569764 RIMBP3CA6NJZ7 1639 aa9.15□□□□□ -0.94
SMG1-217ENST00000569764 RIMBP3BA6NNM3 1639 aa9.15□□□□□ -0.94
SMG1-217ENST00000569764 RIMBP3Q9UFD9 1639 aa9.15□□□□□ -0.94
SMG1-217ENST00000569764 MTMR7Q9Y216 660 aa9.15□□□□□ -0.94
SMG1-217ENST00000569764 MAGI3Q5TCQ9 1506 aa9.15□□□□□ -0.94
SMG1-217ENST00000569764 AEBP1Q8IUX7 1158 aa9.15□□□□□ -0.94
SMG1-217ENST00000569764 NCLP19338 710 aaKnown RBP9.15□□□□□ -0.95
SMG1-217ENST00000569764 ANKLE2Q86XL3 938 aa9.15□□□□□ -0.95
SMG1-217ENST00000569764 WASHC2CQ9Y4E1 1318 aa9.15□□□□□ -0.95
SMG1-217ENST00000569764 IQGAP2Q13576 1575 aa9.14□□□□□ -0.95
SMG1-217ENST00000569764 FANCAO15360 1455 aa9.14□□□□□ -0.95
SMG1-217ENST00000569764 TRIM52Q96A61 297 aa9.14□□□□□ -0.95
SMG1-217ENST00000569764 ABCC2Q92887 1545 aa9.14□□□□□ -0.95
SMG1-217ENST00000569764 HMGB2P26583 209 aaKnown RBP9.14□□□□□ -0.95
SMG1-217ENST00000569764 GLIPR1L2Q4G1C9 344 aa9.14□□□□□ -0.95
SMG1-217ENST00000569764 MEX3CQ5U5Q3 659 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms