RNA–Protein interactions for RNA: ENST00000569363.1

SPG7-220, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-220ENST00000569363 DAPK1P53355 1430 aa11.18□□□□□ -0.62
SPG7-220ENST00000569363 RAPGEF6Q8TEU7 1601 aa11.18□□□□□ -0.62
SPG7-220ENST00000569363 MPHOSPH9Q99550 1183 aa11.18□□□□□ -0.62
SPG7-220ENST00000569363 EIF4G2P78344 907 aaKnown RBP eCLIP11.17□□□□□ -0.62
SPG7-220ENST00000569363 DISP1Q96F81 1524 aa11.17□□□□□ -0.62
SPG7-220ENST00000569363 HIRIP3Q9BW71 556 aaPredicted RBP11.16□□□□□ -0.62
SPG7-220ENST00000569363 CHIC2Q9UKJ5 165 aa11.16□□□□□ -0.62
SPG7-220ENST00000569363 DENND4BO75064 1496 aaPredicted RBP11.16□□□□□ -0.62
SPG7-220ENST00000569363 GRIN2AQ12879 1464 aa11.16□□□□□ -0.62
SPG7-220ENST00000569363 ITSN2Q9NZM3 1697 aa11.15□□□□□ -0.62
SPG7-220ENST00000569363 NUP153P49790 1475 aaKnown RBP11.15□□□□□ -0.62
SPG7-220ENST00000569363 MAGI1Q96QZ7 1491 aaPredicted RBP11.15□□□□□ -0.62
SPG7-220ENST00000569363 HSPA5P11021 654 aaKnown RBP11.15□□□□□ -0.62
SPG7-220ENST00000569363 ABCC5O15440 1437 aa11.15□□□□□ -0.62
SPG7-220ENST00000569363 RPRD2Q5VT52 1461 aaKnown RBP11.14□□□□□ -0.63
SPG7-220ENST00000569363 KDM6BO15054 1643 aa11.14□□□□□ -0.63
SPG7-220ENST00000569363 FKBP8Q14318 412 aa11.14□□□□□ -0.63
SPG7-220ENST00000569363 TROQ12816 1431 aaPredicted RBP11.14□□□□□ -0.63
SPG7-220ENST00000569363 CNTLNQ9NXG0 1405 aa11.13□□□□□ -0.63
SPG7-220ENST00000569363 TSHZ2Q9NRE2 1034 aa11.13□□□□□ -0.63
SPG7-220ENST00000569363 ANKRD30BQ9BXX2 1392 aa11.13□□□□□ -0.63
SPG7-220ENST00000569363 ADCY10Q96PN6 1610 aa11.13□□□□□ -0.63
SPG7-220ENST00000569363 ADGBQ8N7X0 1667 aa11.12□□□□□ -0.63
SPG7-220ENST00000569363 RIMBP3CA6NJZ7 1639 aa11.11□□□□□ -0.63
SPG7-220ENST00000569363 RIMBP3BA6NNM3 1639 aa11.11□□□□□ -0.63
SPG7-220ENST00000569363 RIMBP3Q9UFD9 1639 aa11.11□□□□□ -0.63
SPG7-220ENST00000569363 ADGRL2O95490 1459 aa11.11□□□□□ -0.63
SPG7-220ENST00000569363 WASHC2AQ641Q2 1341 aa11.1□□□□□ -0.63
SPG7-220ENST00000569363 NCOA1Q15788 1441 aa11.1□□□□□ -0.63
SPG7-220ENST00000569363 CARMIL2Q6F5E8 1435 aa11.1□□□□□ -0.63
SPG7-220ENST00000569363 L3MBTL2Q969R5 705 aa11.1□□□□□ -0.63
SPG7-220ENST00000569363 CLASP1Q7Z460 1538 aa11.09□□□□□ -0.63
SPG7-220ENST00000569363 SYNJ2O15056 1496 aa11.09□□□□□ -0.63
SPG7-220ENST00000569363 TEX14Q8IWB6 1497 aa11.09□□□□□ -0.63
SPG7-220ENST00000569363 CCDC7Q96M83 1385 aa11.09□□□□□ -0.63
SPG7-220ENST00000569363 ERICH6BQ5W0A0 696 aa11.09□□□□□ -0.63
SPG7-220ENST00000569363 CAMSAP2Q08AD1 1489 aa11.08□□□□□ -0.64
SPG7-220ENST00000569363 POLR1AO95602 1720 aaPredicted RBP11.07□□□□□ -0.64
SPG7-220ENST00000569363 SLC4A1APQ9BWU0 796 aaKnown RBP11.07□□□□□ -0.64
SPG7-220ENST00000569363 ANKRD30AQ9BXX3 1397 aa11.06□□□□□ -0.64
SPG7-220ENST00000569363 GPATCH8Q9UKJ3 1502 aaKnown RBP11.06□□□□□ -0.64
SPG7-220ENST00000569363 CROCC2H7BZ55 1655 aa11.06□□□□□ -0.64
SPG7-220ENST00000569363 CFDP1Q9UEE9 299 aaPredicted RBP11.06□□□□□ -0.64
SPG7-220ENST00000569363 HNRNPUQ00839 825 aaKnown RBP eCLIP11.05□□□□□ -0.64
SPG7-220ENST00000569363 CEP170Q5SW79 1584 aa11.05□□□□□ -0.64
SPG7-220ENST00000569363 KIAA1107Q9UPP5 1409 aa11.05□□□□□ -0.64
SPG7-220ENST00000569363 PZPP20742 1482 aa11.05□□□□□ -0.64
SPG7-220ENST00000569363 SHANK2Q9UPX8 1470 aa11.05□□□□□ -0.64
SPG7-220ENST00000569363 ARID4BQ4LE39 1312 aaPredicted RBP11.05□□□□□ -0.64
SPG7-220ENST00000569363 NUP160Q12769 1436 aa11.04□□□□□ -0.64
SPG7-220ENST00000569363 SPATA31E1Q6ZUB1 1445 aa11.04□□□□□ -0.64
SPG7-220ENST00000569363 PRG4Q92954 1404 aaPredicted RBP11.04□□□□□ -0.64
SPG7-220ENST00000569363 CHMP7Q8WUX9 453 aaPredicted RBP11.04□□□□□ -0.64
SPG7-220ENST00000569363 BCANQ96GW7 911 aa11.04□□□□□ -0.64
SPG7-220ENST00000569363 ARID3CA6NKF2 412 aa11.03□□□□□ -0.64
SPG7-220ENST00000569363 KIF14Q15058 1648 aa11.02□□□□□ -0.64
SPG7-220ENST00000569363 MBD5Q9P267 1494 aa11.02□□□□□ -0.65
SPG7-220ENST00000569363 PRKRIP1Q9H875 184 aaPredicted RBP11.02□□□□□ -0.65
SPG7-220ENST00000569363 ZNF644Q9H582 1327 aaPredicted RBP11.02□□□□□ -0.65
SPG7-220ENST00000569363 NBPF8Q3BBV2 869 aa11.01□□□□□ -0.65
SPG7-220ENST00000569363 ABCA8O94911 1581 aa11.01□□□□□ -0.65
SPG7-220ENST00000569363 PLB1Q6P1J6 1458 aa11□□□□□ -0.65
SPG7-220ENST00000569363 KDM5DQ9BY66 1539 aa11□□□□□ -0.65
SPG7-220ENST00000569363 PLEKHD1A6NEE1 506 aa11□□□□□ -0.65
SPG7-220ENST00000569363 ARHGEF12Q9NZN5 1544 aa10.99□□□□□ -0.65
SPG7-220ENST00000569363 JPH4Q96JJ6 628 aa10.99□□□□□ -0.65
SPG7-220ENST00000569363 ZBED9Q6R2W3 1325 aa10.99□□□□□ -0.65
SPG7-220ENST00000569363 ROCK2O75116 1388 aaKnown RBP10.99□□□□□ -0.65
SPG7-220ENST00000569363 UHRF1BP1Q6BDS2 1440 aa10.99□□□□□ -0.65
SPG7-220ENST00000569363 ANKRD50Q9ULJ7 1429 aa10.99□□□□□ -0.65
SPG7-220ENST00000569363 ABCC10Q5T3U5 1492 aa10.99□□□□□ -0.65
SPG7-220ENST00000569363 MRS2Q9HD23 443 aa10.98□□□□□ -0.65
SPG7-220ENST00000569363 KIF7Q2M1P5 1343 aa10.98□□□□□ -0.65
SPG7-220ENST00000569363 ARHGEF5Q12774 1597 aa10.98□□□□□ -0.65
SPG7-220ENST00000569363 ANP32EQ9BTT0 268 aa10.97□□□□□ -0.65
SPG7-220ENST00000569363 ERCC6L2Q5T890 1561 aa10.97□□□□□ -0.65
SPG7-220ENST00000569363 SHROOM2Q13796 1616 aa10.97□□□□□ -0.65
SPG7-220ENST00000569363 CDC42BPAQ5VT25 1732 aa10.96□□□□□ -0.65
SPG7-220ENST00000569363 RALGAPBQ86X10 1494 aa10.96□□□□□ -0.65
SPG7-220ENST00000569363 C9orf84Q5VXU9 1444 aa10.96□□□□□ -0.65
SPG7-220ENST00000569363 C11orf95C9JLR9 678 aaPredicted RBP10.96□□□□□ -0.65
SPG7-220ENST00000569363 ATP10BO94823 1461 aa10.95□□□□□ -0.66
SPG7-220ENST00000569363 USP47Q96K76 1375 aa10.95□□□□□ -0.66
SPG7-220ENST00000569363 TSPY4P0CV99 314 aa10.95□□□□□ -0.66
SPG7-220ENST00000569363 TSPY10P0CW01 314 aa10.95□□□□□ -0.66
SPG7-220ENST00000569363 PKD2Q13563 968 aa10.95□□□□□ -0.66
SPG7-220ENST00000569363 RSPH4AQ5TD94 716 aa10.95□□□□□ -0.66
SPG7-220ENST00000569363 PPP4R2Q9NY27 417 aa10.95□□□□□ -0.66
SPG7-220ENST00000569363 ZNF777Q9ULD5 760 aaPredicted RBP10.95□□□□□ -0.66
SPG7-220ENST00000569363 KDM5CP41229 1560 aa10.94□□□□□ -0.66
SPG7-220ENST00000569363 PTPRGP23470 1445 aa10.93□□□□□ -0.66
SPG7-220ENST00000569363 KTN1Q86UP2 1357 aaKnown RBP10.93□□□□□ -0.66
SPG7-220ENST00000569363 RBM19Q9Y4C8 960 aaKnown RBP10.93□□□□□ -0.66
SPG7-220ENST00000569363 NUP155O75694 1391 aa10.92□□□□□ -0.66
SPG7-220ENST00000569363 FBLN2P98095 1184 aa10.92□□□□□ -0.66
SPG7-220ENST00000569363 DHX29Q7Z478 1369 aaKnown RBP10.91□□□□□ -0.66
SPG7-220ENST00000569363 OSCARQ8IYS5 282 aa10.91□□□□□ -0.66
SPG7-220ENST00000569363 FAM9BQ8IZU0 186 aa10.91□□□□□ -0.66
SPG7-220ENST00000569363 CCDC141Q6ZP82 1450 aa10.91□□□□□ -0.66
SPG7-220ENST00000569363 SMG6Q86US8 1419 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms