RNA–Protein interactions for RNA: ENST00000568993.5

SNX20-204, Transcript of sorting nexin 20, humanhuman

TSL 1 (best)

Gene SNX20, Length 2,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-204ENST00000568993 CAMSAP2Q08AD1 1489 aa22.8■■□□□ 1.24
SNX20-204ENST00000568993 ZNF644Q9H582 1327 aaPredicted RBP22.79■■□□□ 1.24
SNX20-204ENST00000568993 CHIC2Q9UKJ5 165 aa22.75■■□□□ 1.23
SNX20-204ENST00000568993 ACIN1Q9UKV3 1341 aaKnown RBP22.74■■□□□ 1.23
SNX20-204ENST00000568993 RRP7BPQ9NSQ0 103 aa22.74■■□□□ 1.23
SNX20-204ENST00000568993 KDM5BQ9UGL1 1544 aa22.72■■□□□ 1.23
SNX20-204ENST00000568993 ZNF316A6NFI3 1004 aaPredicted RBP22.71■■□□□ 1.23
SNX20-204ENST00000568993 CROCC2H7BZ55 1655 aa22.69■■□□□ 1.22
SNX20-204ENST00000568993 TIMELESSQ9UNS1 1208 aa22.69■■□□□ 1.22
SNX20-204ENST00000568993 ZCCHC11Q5TAX3 1644 aaKnown RBP22.69■■□□□ 1.22
SNX20-204ENST00000568993 ADGRL2O95490 1459 aa22.67■■□□□ 1.22
SNX20-204ENST00000568993 MYT1Q01538 1121 aa22.67■■□□□ 1.22
SNX20-204ENST00000568993 KDM6BO15054 1643 aa22.67■■□□□ 1.22
SNX20-204ENST00000568993 PREX2Q70Z35 1606 aa22.67■■□□□ 1.22
SNX20-204ENST00000568993 ADGBQ8N7X0 1667 aa22.67■■□□□ 1.22
SNX20-204ENST00000568993 OSCARQ8IYS5 282 aa22.67■■□□□ 1.22
SNX20-204ENST00000568993 CDC42BPBQ9Y5S2 1711 aa22.65■■□□□ 1.22
SNX20-204ENST00000568993 ZNF777Q9ULD5 760 aaPredicted RBP22.65■■□□□ 1.22
SNX20-204ENST00000568993 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.64■■□□□ 1.22
SNX20-204ENST00000568993 SHANK2Q9UPX8 1470 aa22.64■■□□□ 1.21
SNX20-204ENST00000568993 NCOA1Q15788 1441 aa22.64■■□□□ 1.21
SNX20-204ENST00000568993 ARHGEF5Q12774 1597 aa22.63■■□□□ 1.21
SNX20-204ENST00000568993 TTC37Q6PGP7 1564 aa22.62■■□□□ 1.21
SNX20-204ENST00000568993 SIN3AQ96ST3 1273 aa22.6■■□□□ 1.21
SNX20-204ENST00000568993 MBD5Q9P267 1494 aa22.59■■□□□ 1.21
SNX20-204ENST00000568993 SAMD9LQ8IVG5 1584 aa22.58■■□□□ 1.21
SNX20-204ENST00000568993 ANKRD30AQ9BXX3 1397 aa22.58■■□□□ 1.2
SNX20-204ENST00000568993 MYO5CQ9NQX4 1742 aa22.57■■□□□ 1.2
SNX20-204ENST00000568993 RSPH4AQ5TD94 716 aa22.57■■□□□ 1.2
SNX20-204ENST00000568993 DENND4BO75064 1496 aaPredicted RBP22.56■■□□□ 1.2
SNX20-204ENST00000568993 DIEXFQ68CQ4 756 aaKnown RBP22.55■■□□□ 1.2
SNX20-204ENST00000568993 NEUROD1Q13562 356 aa22.54■■□□□ 1.2
SNX20-204ENST00000568993 C9orf84Q5VXU9 1444 aa22.54■■□□□ 1.2
SNX20-204ENST00000568993 TRIM52Q96A61 297 aa22.53■■□□□ 1.2
SNX20-204ENST00000568993 MPHOSPH9Q99550 1183 aa22.52■■□□□ 1.2
SNX20-204ENST00000568993 ARHGAP5Q13017 1502 aa22.52■■□□□ 1.2
SNX20-204ENST00000568993 CCDC141Q6ZP82 1450 aa22.52■■□□□ 1.19
SNX20-204ENST00000568993 PLCH2O75038 1416 aa22.51■■□□□ 1.19
SNX20-204ENST00000568993 KIAA1107Q9UPP5 1409 aa22.51■■□□□ 1.19
SNX20-204ENST00000568993 PLEKHH2Q8IVE3 1493 aa22.51■■□□□ 1.19
SNX20-204ENST00000568993 TSPY4P0CV99 314 aa22.51■■□□□ 1.19
SNX20-204ENST00000568993 TSPY10P0CW01 314 aa22.51■■□□□ 1.19
SNX20-204ENST00000568993 HNRNPMP52272 730 aaKnown RBP eCLIP22.5■■□□□ 1.19
SNX20-204ENST00000568993 KCNH8Q96L42 1107 aa22.5■■□□□ 1.19
SNX20-204ENST00000568993 WDR7Q9Y4E6 1490 aa22.48■■□□□ 1.19
SNX20-204ENST00000568993 ARAP3Q8WWN8 1544 aa22.47■■□□□ 1.19
SNX20-204ENST00000568993 MAST1Q9Y2H9 1570 aa22.47■■□□□ 1.19
SNX20-204ENST00000568993 ANKRD50Q9ULJ7 1429 aa22.47■■□□□ 1.19
SNX20-204ENST00000568993 PPP1R15AO75807 674 aaPredicted RBP22.47■■□□□ 1.19
SNX20-204ENST00000568993 SYCP2Q9BX26 1530 aa22.45■■□□□ 1.18
SNX20-204ENST00000568993 TONSLQ96HA7 1378 aa22.43■■□□□ 1.18
SNX20-204ENST00000568993 PZPP20742 1482 aa22.43■■□□□ 1.18
SNX20-204ENST00000568993 EFCAB2Q5VUJ9 269 aa22.42■■□□□ 1.18
SNX20-204ENST00000568993 ANKRD30BQ9BXX2 1392 aa22.4■■□□□ 1.18
SNX20-204ENST00000568993 KIF15Q9NS87 1388 aa22.4■■□□□ 1.18
SNX20-204ENST00000568993 ABCA9Q8IUA7 1624 aa22.39■■□□□ 1.17
SNX20-204ENST00000568993 SLC4A1APQ9BWU0 796 aaKnown RBP22.38■■□□□ 1.17
SNX20-204ENST00000568993 ABCC1P33527 1531 aa22.38■■□□□ 1.17
SNX20-204ENST00000568993 ARHGEF12Q9NZN5 1544 aa22.38■■□□□ 1.17
SNX20-204ENST00000568993 ASXL2Q76L83 1435 aa22.38■■□□□ 1.17
SNX20-204ENST00000568993 KDM5DQ9BY66 1539 aa22.37■■□□□ 1.17
SNX20-204ENST00000568993 PLXNC1O60486 1568 aa22.36■■□□□ 1.17
SNX20-204ENST00000568993 RPRD2Q5VT52 1461 aaKnown RBP22.32■■□□□ 1.16
SNX20-204ENST00000568993 NPM1P06748 294 aaKnown RBP eCLIP22.31■■□□□ 1.16
SNX20-204ENST00000568993 FOXD1Q16676 465 aa22.31■■□□□ 1.16
SNX20-204ENST00000568993 NUP155O75694 1391 aa22.29■■□□□ 1.16
SNX20-204ENST00000568993 TRAPPC8Q9Y2L5 1435 aa22.27■■□□□ 1.16
SNX20-204ENST00000568993 DUOX2Q9NRD8 1548 aa22.26■■□□□ 1.15
SNX20-204ENST00000568993 FANCAO15360 1455 aa22.26■■□□□ 1.15
SNX20-204ENST00000568993 RTEL1-TNFRSF6BF6WH68 1400 aa22.26■■□□□ 1.15
SNX20-204ENST00000568993 PKD2Q13563 968 aa22.24■■□□□ 1.15
SNX20-204ENST00000568993 UNC13BO14795 1591 aa22.24■■□□□ 1.15
SNX20-204ENST00000568993 ERBINQ96RT1 1412 aa22.22■■□□□ 1.15
SNX20-204ENST00000568993 L3MBTL2Q969R5 705 aa22.21■■□□□ 1.15
SNX20-204ENST00000568993 TEX14Q8IWB6 1497 aa22.21■■□□□ 1.15
SNX20-204ENST00000568993 FAM135AQ9P2D6 1515 aa22.19■■□□□ 1.14
SNX20-204ENST00000568993 ZFYVE16Q7Z3T8 1539 aa22.18■■□□□ 1.14
SNX20-204ENST00000568993 SPAG9O60271 1321 aaKnown RBP22.17■■□□□ 1.14
SNX20-204ENST00000568993 MAGI2Q86UL8 1455 aa22.17■■□□□ 1.14
SNX20-204ENST00000568993 ADGRL1O94910 1474 aa22.17■■□□□ 1.14
SNX20-204ENST00000568993 AFAP1Q8N556 730 aa22.16■■□□□ 1.14
SNX20-204ENST00000568993 IQGAP3Q86VI3 1631 aa22.15■■□□□ 1.14
SNX20-204ENST00000568993 INO80Q9ULG1 1556 aaPredicted RBP22.15■■□□□ 1.14
SNX20-204ENST00000568993 SCAPERQ9BY12 1400 aa22.15■■□□□ 1.14
SNX20-204ENST00000568993 MIER1Q8N108 512 aa22.14■■□□□ 1.14
SNX20-204ENST00000568993 CFAP74Q9C0B2 1584 aa22.14■■□□□ 1.13
SNX20-204ENST00000568993 CD109Q6YHK3 1445 aa22.13■■□□□ 1.13
SNX20-204ENST00000568993 RIMBP3CA6NJZ7 1639 aa22.12■■□□□ 1.13
SNX20-204ENST00000568993 RIMBP3BA6NNM3 1639 aa22.12■■□□□ 1.13
SNX20-204ENST00000568993 RIMBP3Q9UFD9 1639 aa22.12■■□□□ 1.13
SNX20-204ENST00000568993 ATP7AQ04656 1500 aa22.11■■□□□ 1.13
SNX20-204ENST00000568993 ZNF518AQ6AHZ1 1483 aa22.06■■□□□ 1.12
SNX20-204ENST00000568993 DEPDC5O75140 1603 aa22.05■■□□□ 1.12
SNX20-204ENST00000568993 NBPF8Q3BBV2 869 aa22.04■■□□□ 1.12
SNX20-204ENST00000568993 CYB5RLQ6IPT4 315 aa22.04■■□□□ 1.12
SNX20-204ENST00000568993 ATP10AO60312 1499 aa22.04■■□□□ 1.12
SNX20-204ENST00000568993 NEO1Q92859 1461 aa22.03■■□□□ 1.12
SNX20-204ENST00000568993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.02■■□□□ 1.12
SNX20-204ENST00000568993 EIF2AK4Q9P2K8 1649 aaKnown RBP22.02■■□□□ 1.12
SNX20-204ENST00000568993 KIDINS220Q9ULH0 1771 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms