RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 SCAPERQ9BY12 1400 aa20.97■□□□□ 0.95
SNX29-207ENST00000568949 MLECQ14165 292 aa20.97■□□□□ 0.95
SNX29-207ENST00000568949 ATP10AO60312 1499 aa20.94■□□□□ 0.94
SNX29-207ENST00000568949 ARHGEF12Q9NZN5 1544 aa20.94■□□□□ 0.94
SNX29-207ENST00000568949 CDK13Q14004 1512 aaKnown RBP20.94■□□□□ 0.94
SNX29-207ENST00000568949 C9orf84Q5VXU9 1444 aa20.92■□□□□ 0.94
SNX29-207ENST00000568949 EFCAB2Q5VUJ9 269 aa20.9■□□□□ 0.94
SNX29-207ENST00000568949 PREX1Q8TCU6 1659 aa20.89■□□□□ 0.94
SNX29-207ENST00000568949 MYO5CQ9NQX4 1742 aa20.87■□□□□ 0.93
SNX29-207ENST00000568949 DMRT2Q9Y5R5 561 aa20.86■□□□□ 0.93
SNX29-207ENST00000568949 SETD1BQ9UPS6 1966 aaKnown RBP20.85■□□□□ 0.93
SNX29-207ENST00000568949 CDK11AQ9UQ88 783 aaPredicted RBP20.85■□□□□ 0.93
SNX29-207ENST00000568949 FMN1Q68DA7 1419 aa20.84■□□□□ 0.93
SNX29-207ENST00000568949 ZNF518AQ6AHZ1 1483 aa20.83■□□□□ 0.93
SNX29-207ENST00000568949 CEBPAP49715 358 aaPredicted RBP20.83■□□□□ 0.93
SNX29-207ENST00000568949 STRCQ7RTU9 1775 aa20.81■□□□□ 0.92
SNX29-207ENST00000568949 KDM5CP41229 1560 aa20.8■□□□□ 0.92
SNX29-207ENST00000568949 UHRF1BP1Q6BDS2 1440 aa20.8■□□□□ 0.92
SNX29-207ENST00000568949 KIF14Q15058 1648 aa20.79■□□□□ 0.92
SNX29-207ENST00000568949 ATP1B4Q9UN42 357 aaPredicted RBP20.79■□□□□ 0.92
SNX29-207ENST00000568949 TROQ12816 1431 aaPredicted RBP20.78■□□□□ 0.92
SNX29-207ENST00000568949 AFAP1Q8N556 730 aa20.78■□□□□ 0.92
SNX29-207ENST00000568949 REREQ9P2R6 1566 aa20.77■□□□□ 0.92
SNX29-207ENST00000568949 ARHGAP5Q13017 1502 aa20.77■□□□□ 0.92
SNX29-207ENST00000568949 CLIP1P30622 1438 aa20.75■□□□□ 0.91
SNX29-207ENST00000568949 DIP2CQ9Y2E4 1556 aa20.75■□□□□ 0.91
SNX29-207ENST00000568949 ARHGAP35Q9NRY4 1499 aa20.75■□□□□ 0.91
SNX29-207ENST00000568949 MLH3Q9UHC1 1453 aa20.74■□□□□ 0.91
SNX29-207ENST00000568949 DISP3Q9P2K9 1392 aa20.73■□□□□ 0.91
SNX29-207ENST00000568949 PTPRTO14522 1441 aa20.73■□□□□ 0.91
SNX29-207ENST00000568949 UBTFP17480 764 aaKnown RBP20.73■□□□□ 0.91
SNX29-207ENST00000568949 MYT1LQ9UL68 1186 aa20.73■□□□□ 0.91
SNX29-207ENST00000568949 AGLP35573 1532 aa20.71■□□□□ 0.91
SNX29-207ENST00000568949 C3P01024 1663 aa20.7■□□□□ 0.91
SNX29-207ENST00000568949 ABCA6Q8N139 1617 aa20.69■□□□□ 0.9
SNX29-207ENST00000568949 ILDR2Q71H61 639 aa20.69■□□□□ 0.9
SNX29-207ENST00000568949 CDC42BPBQ9Y5S2 1711 aa20.69■□□□□ 0.9
SNX29-207ENST00000568949 TRAPPC8Q9Y2L5 1435 aa20.68■□□□□ 0.9
SNX29-207ENST00000568949 SOCS7O14512 581 aa20.67■□□□□ 0.9
SNX29-207ENST00000568949 ESF1Q9H501 851 aaKnown RBP20.67■□□□□ 0.9
SNX29-207ENST00000568949 LRRIQ1Q96JM4 1722 aa20.66■□□□□ 0.9
SNX29-207ENST00000568949 PREX2Q70Z35 1606 aa20.64■□□□□ 0.9
SNX29-207ENST00000568949 ABCC1P33527 1531 aa20.64■□□□□ 0.9
SNX29-207ENST00000568949 CNTLNQ9NXG0 1405 aa20.64■□□□□ 0.89
SNX29-207ENST00000568949 IQSEC2Q5JU85 1478 aa20.63■□□□□ 0.89
SNX29-207ENST00000568949 EHMT2Q96KQ7 1210 aa20.63■□□□□ 0.89
SNX29-207ENST00000568949 LTBP4Q8N2S1 1624 aa20.63■□□□□ 0.89
SNX29-207ENST00000568949 ITSN2Q9NZM3 1697 aa20.62■□□□□ 0.89
SNX29-207ENST00000568949 NCOA1Q15788 1441 aa20.61■□□□□ 0.89
SNX29-207ENST00000568949 KIDINS220Q9ULH0 1771 aa20.6■□□□□ 0.89
SNX29-207ENST00000568949 CCDC18Q5T9S5 1454 aa20.59■□□□□ 0.89
SNX29-207ENST00000568949 SPATA31D1Q6ZQQ2 1576 aa20.59■□□□□ 0.89
SNX29-207ENST00000568949 NPATQ14207 1427 aa20.58■□□□□ 0.88
SNX29-207ENST00000568949 CASKIN1Q8WXD9 1431 aa20.56■□□□□ 0.88
SNX29-207ENST00000568949 MROH2AA6NES4 1674 aa20.56■□□□□ 0.88
SNX29-207ENST00000568949 CDC42BPAQ5VT25 1732 aa20.55■□□□□ 0.88
SNX29-207ENST00000568949 CAMSAP1Q5T5Y3 1602 aa20.53■□□□□ 0.88
SNX29-207ENST00000568949 SAMD9LQ8IVG5 1584 aa20.52■□□□□ 0.88
SNX29-207ENST00000568949 ZMYM3Q14202 1370 aa20.52■□□□□ 0.88
SNX29-207ENST00000568949 SPAG9O60271 1321 aaKnown RBP20.49■□□□□ 0.87
SNX29-207ENST00000568949 ZNF777Q9ULD5 760 aaPredicted RBP20.47■□□□□ 0.87
SNX29-207ENST00000568949 PKD2Q13563 968 aa20.46■□□□□ 0.87
SNX29-207ENST00000568949 SUPT6HQ7KZ85 1726 aaKnown RBP20.46■□□□□ 0.87
SNX29-207ENST00000568949 SYCP2Q9BX26 1530 aa20.46■□□□□ 0.87
SNX29-207ENST00000568949 PLA2R1Q13018 1463 aa20.45■□□□□ 0.86
SNX29-207ENST00000568949 FYCO1Q9BQS8 1478 aa20.45■□□□□ 0.86
SNX29-207ENST00000568949 GPATCH8Q9UKJ3 1502 aaKnown RBP20.45■□□□□ 0.86
SNX29-207ENST00000568949 NCKAP5LQ9HCH0 1330 aa20.45■□□□□ 0.86
SNX29-207ENST00000568949 ZNF142P52746 1687 aaPredicted RBP20.45■□□□□ 0.86
SNX29-207ENST00000568949 KIAA1107Q9UPP5 1409 aa20.44■□□□□ 0.86
SNX29-207ENST00000568949 ZNF335Q9H4Z2 1342 aaPredicted RBP20.44■□□□□ 0.86
SNX29-207ENST00000568949 ATP7AQ04656 1500 aa20.43■□□□□ 0.86
SNX29-207ENST00000568949 HNRNPMP52272 730 aaKnown RBP eCLIP20.43■□□□□ 0.86
SNX29-207ENST00000568949 PLEKHH2Q8IVE3 1493 aa20.43■□□□□ 0.86
SNX29-207ENST00000568949 PLXNC1O60486 1568 aa20.42■□□□□ 0.86
SNX29-207ENST00000568949 MYO3AQ8NEV4 1616 aa20.42■□□□□ 0.86
SNX29-207ENST00000568949 CLTCQ00610 1675 aaKnown RBP20.42■□□□□ 0.86
SNX29-207ENST00000568949 UBAP1LF5GYI3 381 aa20.42■□□□□ 0.86
SNX29-207ENST00000568949 A2MP01023 1474 aa20.42■□□□□ 0.86
SNX29-207ENST00000568949 CHIC1Q5VXU3 224 aa20.41■□□□□ 0.86
SNX29-207ENST00000568949 PTPRKQ15262 1439 aa20.41■□□□□ 0.86
SNX29-207ENST00000568949 TCOF1Q13428 1488 aaKnown RBP20.41■□□□□ 0.86
SNX29-207ENST00000568949 INO80Q9ULG1 1556 aaPredicted RBP20.41■□□□□ 0.86
SNX29-207ENST00000568949 PPP6R1Q9UPN7 881 aa20.4■□□□□ 0.86
SNX29-207ENST00000568949 CEP170BQ9Y4F5 1589 aaPredicted RBP20.4■□□□□ 0.86
SNX29-207ENST00000568949 CFDP1Q9UEE9 299 aaPredicted RBP20.39■□□□□ 0.85
SNX29-207ENST00000568949 GGT6Q6P531 493 aa20.37■□□□□ 0.85
SNX29-207ENST00000568949 CCNB3Q8WWL7 1395 aa20.35■□□□□ 0.85
SNX29-207ENST00000568949 ADGBQ8N7X0 1667 aa20.34■□□□□ 0.85
SNX29-207ENST00000568949 A2ML1A8K2U0 1454 aa20.32■□□□□ 0.84
SNX29-207ENST00000568949 DNMT1P26358 1616 aaKnown RBP20.29■□□□□ 0.84
SNX29-207ENST00000568949 MTUS2Q5JR59 1369 aa20.28■□□□□ 0.84
SNX29-207ENST00000568949 RTEL1-TNFRSF6BF6WH68 1400 aa20.27■□□□□ 0.84
SNX29-207ENST00000568949 MBD5Q9P267 1494 aa20.26■□□□□ 0.83
SNX29-207ENST00000568949 DHX29Q7Z478 1369 aaKnown RBP20.25■□□□□ 0.83
SNX29-207ENST00000568949 CPS1P31327 1500 aa20.25■□□□□ 0.83
SNX29-207ENST00000568949 POLR1AO95602 1720 aaPredicted RBP20.24■□□□□ 0.83
SNX29-207ENST00000568949 ZNF644Q9H582 1327 aaPredicted RBP20.24■□□□□ 0.83
SNX29-207ENST00000568949 TOM1O60784 492 aa20.23■□□□□ 0.83
SNX29-207ENST00000568949 TIAM1Q13009 1591 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms