RNA–Protein interactions for RNA: ENST00000567838.1

THSD4-206, Transcript of thrombospondin type 1 domain containing 4, humanhuman

TSL 2

Gene THSD4, Length 2,645 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-206ENST00000567838 FOXD1Q16676 465 aa17.06■□□□□ 0.32
THSD4-206ENST00000567838 NAIPQ13075 1403 aa17.06■□□□□ 0.32
THSD4-206ENST00000567838 HIRIP3Q9BW71 556 aaPredicted RBP17.05■□□□□ 0.32
THSD4-206ENST00000567838 TRIM52Q96A61 297 aa17.04■□□□□ 0.32
THSD4-206ENST00000567838 CARMIL2Q6F5E8 1435 aa17.04■□□□□ 0.32
THSD4-206ENST00000567838 ANP32CO43423 234 aa17.03■□□□□ 0.32
THSD4-206ENST00000567838 TCOF1Q13428 1488 aaKnown RBP17.03■□□□□ 0.32
THSD4-206ENST00000567838 PTPRGP23470 1445 aa17.01■□□□□ 0.31
THSD4-206ENST00000567838 CFDP1Q9UEE9 299 aaPredicted RBP17■□□□□ 0.31
THSD4-206ENST00000567838 UACAQ9BZF9 1416 aa16.99■□□□□ 0.31
THSD4-206ENST00000567838 TONSLQ96HA7 1378 aa16.99■□□□□ 0.31
THSD4-206ENST00000567838 MIA2Q96PC5 1412 aa16.99■□□□□ 0.31
THSD4-206ENST00000567838 CDK11AQ9UQ88 783 aaPredicted RBP16.99■□□□□ 0.31
THSD4-206ENST00000567838 PLEKHD1A6NEE1 506 aa16.98■□□□□ 0.31
THSD4-206ENST00000567838 KIF14Q15058 1648 aa16.98■□□□□ 0.31
THSD4-206ENST00000567838 KDM6BO15054 1643 aa16.97■□□□□ 0.31
THSD4-206ENST00000567838 MSH5O43196 834 aa16.97■□□□□ 0.31
THSD4-206ENST00000567838 GCC2Q8IWJ2 1684 aa16.96■□□□□ 0.3
THSD4-206ENST00000567838 ATP10BO94823 1461 aa16.95■□□□□ 0.3
THSD4-206ENST00000567838 TROQ12816 1431 aaPredicted RBP16.94■□□□□ 0.3
THSD4-206ENST00000567838 HNRNPMP52272 730 aaKnown RBP eCLIP16.93■□□□□ 0.3
THSD4-206ENST00000567838 DAPK1P53355 1430 aa16.91■□□□□ 0.3
THSD4-206ENST00000567838 FANCIQ9NVI1 1328 aa16.91■□□□□ 0.3
THSD4-206ENST00000567838 ABCC5O15440 1437 aa16.89■□□□□ 0.29
THSD4-206ENST00000567838 DNMT1P26358 1616 aaKnown RBP16.89■□□□□ 0.29
THSD4-206ENST00000567838 ABCA8O94911 1581 aa16.89■□□□□ 0.29
THSD4-206ENST00000567838 AKNAQ7Z591 1439 aa16.88■□□□□ 0.29
THSD4-206ENST00000567838 GPATCH8Q9UKJ3 1502 aaKnown RBP16.86■□□□□ 0.29
THSD4-206ENST00000567838 DENND4BO75064 1496 aaPredicted RBP16.86■□□□□ 0.29
THSD4-206ENST00000567838 CAMSAP2Q08AD1 1489 aa16.86■□□□□ 0.29
THSD4-206ENST00000567838 ITSN2Q9NZM3 1697 aa16.86■□□□□ 0.29
THSD4-206ENST00000567838 ADCY10Q96PN6 1610 aa16.85■□□□□ 0.29
THSD4-206ENST00000567838 MPHOSPH9Q99550 1183 aa16.83■□□□□ 0.28
THSD4-206ENST00000567838 HNRNPUQ00839 825 aaKnown RBP eCLIP16.82■□□□□ 0.28
THSD4-206ENST00000567838 CDC42BPAQ5VT25 1732 aa16.81■□□□□ 0.28
THSD4-206ENST00000567838 ROCK1Q13464 1354 aa16.81■□□□□ 0.28
THSD4-206ENST00000567838 ERICH6BQ5W0A0 696 aa16.8■□□□□ 0.28
THSD4-206ENST00000567838 KDM5BQ9UGL1 1544 aa16.8■□□□□ 0.28
THSD4-206ENST00000567838 IRX6P78412 446 aaPredicted RBP16.79■□□□□ 0.28
THSD4-206ENST00000567838 SLC4A1APQ9BWU0 796 aaKnown RBP16.77■□□□□ 0.28
THSD4-206ENST00000567838 ABCC10Q5T3U5 1492 aa16.76■□□□□ 0.27
THSD4-206ENST00000567838 ERICH6Q7L0X2 663 aa16.76■□□□□ 0.27
THSD4-206ENST00000567838 CROCC2H7BZ55 1655 aa16.75■□□□□ 0.27
THSD4-206ENST00000567838 ADGBQ8N7X0 1667 aa16.75■□□□□ 0.27
THSD4-206ENST00000567838 SHROOM2Q13796 1616 aa16.75■□□□□ 0.27
THSD4-206ENST00000567838 NCOA1Q15788 1441 aa16.74■□□□□ 0.27
THSD4-206ENST00000567838 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.74■□□□□ 0.27
THSD4-206ENST00000567838 OSCARQ8IYS5 282 aa16.73■□□□□ 0.27
THSD4-206ENST00000567838 PPP4R2Q9NY27 417 aa16.72■□□□□ 0.27
THSD4-206ENST00000567838 CLASP1Q7Z460 1538 aa16.71■□□□□ 0.27
THSD4-206ENST00000567838 WASHC2AQ641Q2 1341 aa16.71■□□□□ 0.27
THSD4-206ENST00000567838 TSPY4P0CV99 314 aa16.71■□□□□ 0.27
THSD4-206ENST00000567838 TSPY10P0CW01 314 aa16.71■□□□□ 0.27
THSD4-206ENST00000567838 ZNF326Q5BKZ1 582 aaKnown RBP16.71■□□□□ 0.27
THSD4-206ENST00000567838 CNTLNQ9NXG0 1405 aa16.69■□□□□ 0.26
THSD4-206ENST00000567838 TTC37Q6PGP7 1564 aa16.69■□□□□ 0.26
THSD4-206ENST00000567838 SLC24A1O60721 1099 aa16.69■□□□□ 0.26
THSD4-206ENST00000567838 L3MBTL2Q969R5 705 aa16.69■□□□□ 0.26
THSD4-206ENST00000567838 EIF4G2P78344 907 aaKnown RBP eCLIP16.68■□□□□ 0.26
THSD4-206ENST00000567838 MYT1LQ9UL68 1186 aa16.68■□□□□ 0.26
THSD4-206ENST00000567838 ANKRD30BQ9BXX2 1392 aa16.68■□□□□ 0.26
THSD4-206ENST00000567838 ANKRD30AQ9BXX3 1397 aa16.68■□□□□ 0.26
THSD4-206ENST00000567838 ADGRL2O95490 1459 aa16.68■□□□□ 0.26
THSD4-206ENST00000567838 HSPA5P11021 654 aaKnown RBP16.67■□□□□ 0.26
THSD4-206ENST00000567838 CDC42BPBQ9Y5S2 1711 aa16.67■□□□□ 0.26
THSD4-206ENST00000567838 PZPP20742 1482 aa16.67■□□□□ 0.26
THSD4-206ENST00000567838 C9orf84Q5VXU9 1444 aa16.67■□□□□ 0.26
THSD4-206ENST00000567838 POLR1AO95602 1720 aaPredicted RBP16.67■□□□□ 0.26
THSD4-206ENST00000567838 PKD2Q13563 968 aa16.66■□□□□ 0.26
THSD4-206ENST00000567838 AFAP1Q8N556 730 aa16.66■□□□□ 0.26
THSD4-206ENST00000567838 ABCC2Q92887 1545 aa16.66■□□□□ 0.26
THSD4-206ENST00000567838 ARHGAP5Q13017 1502 aa16.65■□□□□ 0.26
THSD4-206ENST00000567838 ANKRD50Q9ULJ7 1429 aa16.65■□□□□ 0.26
THSD4-206ENST00000567838 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.65■□□□□ 0.26
THSD4-206ENST00000567838 SAMD9LQ8IVG5 1584 aa16.64■□□□□ 0.25
THSD4-206ENST00000567838 CCDC184Q52MB2 194 aa16.64■□□□□ 0.25
THSD4-206ENST00000567838 PREX2Q70Z35 1606 aa16.63■□□□□ 0.25
THSD4-206ENST00000567838 CYB5RLQ6IPT4 315 aa16.63■□□□□ 0.25
THSD4-206ENST00000567838 RPRD2Q5VT52 1461 aaKnown RBP16.63■□□□□ 0.25
THSD4-206ENST00000567838 CNGB1Q14028 1251 aaPredicted RBP16.63■□□□□ 0.25
THSD4-206ENST00000567838 ZCCHC11Q5TAX3 1644 aaKnown RBP16.62■□□□□ 0.25
THSD4-206ENST00000567838 NUP155O75694 1391 aa16.62■□□□□ 0.25
THSD4-206ENST00000567838 SYCP2Q9BX26 1530 aa16.62■□□□□ 0.25
THSD4-206ENST00000567838 KIF15Q9NS87 1388 aa16.61■□□□□ 0.25
THSD4-206ENST00000567838 MBD5Q9P267 1494 aa16.61■□□□□ 0.25
THSD4-206ENST00000567838 SHANK2Q9UPX8 1470 aa16.61■□□□□ 0.25
THSD4-206ENST00000567838 ZBED9Q6R2W3 1325 aa16.6■□□□□ 0.25
THSD4-206ENST00000567838 TEX14Q8IWB6 1497 aa16.6■□□□□ 0.25
THSD4-206ENST00000567838 KDM2AQ9Y2K7 1162 aa16.6■□□□□ 0.25
THSD4-206ENST00000567838 B4GALNT3Q6L9W6 998 aa16.59■□□□□ 0.25
THSD4-206ENST00000567838 NBPF8Q3BBV2 869 aa16.59■□□□□ 0.25
THSD4-206ENST00000567838 ARHGEF12Q9NZN5 1544 aa16.58■□□□□ 0.25
THSD4-206ENST00000567838 PRKRIP1Q9H875 184 aaPredicted RBP16.58■□□□□ 0.25
THSD4-206ENST00000567838 CCDC7Q96M83 1385 aa16.57■□□□□ 0.24
THSD4-206ENST00000567838 ARHGEF5Q12774 1597 aa16.57■□□□□ 0.24
THSD4-206ENST00000567838 DEKP35659 375 aaKnown RBP16.57■□□□□ 0.24
THSD4-206ENST00000567838 KIAA1107Q9UPP5 1409 aa16.57■□□□□ 0.24
THSD4-206ENST00000567838 CCDC141Q6ZP82 1450 aa16.57■□□□□ 0.24
THSD4-206ENST00000567838 MYO5CQ9NQX4 1742 aa16.56■□□□□ 0.24
THSD4-206ENST00000567838 RGL3Q3MIN7 710 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms