RNA–Protein interactions for RNA: ENST00000567780.1

HOXC-AS3-204, HOXC cluster antisense RNA 3, humanhuman

Gene HOXC-AS3, Length 2,816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC-AS3-204ENST00000567780 GCC2Q8IWJ2 1684 aa17.41■□□□□ 0.38
HOXC-AS3-204ENST00000567780 KDM5BQ9UGL1 1544 aa17.4■□□□□ 0.38
HOXC-AS3-204ENST00000567780 CFDP1Q9UEE9 299 aaPredicted RBP17.39■□□□□ 0.38
HOXC-AS3-204ENST00000567780 PRG4Q92954 1404 aaPredicted RBP17.39■□□□□ 0.37
HOXC-AS3-204ENST00000567780 BCANQ96GW7 911 aa17.39■□□□□ 0.37
HOXC-AS3-204ENST00000567780 SLC4A1APQ9BWU0 796 aaKnown RBP17.39■□□□□ 0.37
HOXC-AS3-204ENST00000567780 ABCC5O15440 1437 aa17.38■□□□□ 0.37
HOXC-AS3-204ENST00000567780 RAPGEF6Q8TEU7 1601 aa17.38■□□□□ 0.37
HOXC-AS3-204ENST00000567780 EIF4G2P78344 907 aaKnown RBP eCLIP17.37■□□□□ 0.37
HOXC-AS3-204ENST00000567780 PLB1Q6P1J6 1458 aa17.37■□□□□ 0.37
HOXC-AS3-204ENST00000567780 JPH4Q96JJ6 628 aa17.36■□□□□ 0.37
HOXC-AS3-204ENST00000567780 FKBP8Q14318 412 aa17.35■□□□□ 0.37
HOXC-AS3-204ENST00000567780 WASHC2AQ641Q2 1341 aa17.35■□□□□ 0.37
HOXC-AS3-204ENST00000567780 ROCK1Q13464 1354 aa17.34■□□□□ 0.37
HOXC-AS3-204ENST00000567780 MAGI1Q96QZ7 1491 aaPredicted RBP17.33■□□□□ 0.37
HOXC-AS3-204ENST00000567780 TROQ12816 1431 aaPredicted RBP17.33■□□□□ 0.36
HOXC-AS3-204ENST00000567780 SYNJ2O15056 1496 aa17.33■□□□□ 0.36
HOXC-AS3-204ENST00000567780 CEP170Q5SW79 1584 aa17.31■□□□□ 0.36
HOXC-AS3-204ENST00000567780 ANKRD30BQ9BXX2 1392 aa17.31■□□□□ 0.36
HOXC-AS3-204ENST00000567780 CARMIL2Q6F5E8 1435 aa17.3■□□□□ 0.36
HOXC-AS3-204ENST00000567780 DNMT1P26358 1616 aaKnown RBP17.3■□□□□ 0.36
HOXC-AS3-204ENST00000567780 NBPF8Q3BBV2 869 aa17.29■□□□□ 0.36
HOXC-AS3-204ENST00000567780 NEFLP07196 543 aa17.28■□□□□ 0.36
HOXC-AS3-204ENST00000567780 CAMSAP2Q08AD1 1489 aa17.28■□□□□ 0.36
HOXC-AS3-204ENST00000567780 PLEKHD1A6NEE1 506 aa17.27■□□□□ 0.35
HOXC-AS3-204ENST00000567780 GPATCH8Q9UKJ3 1502 aaKnown RBP17.26■□□□□ 0.35
HOXC-AS3-204ENST00000567780 C11orf95C9JLR9 678 aaPredicted RBP17.26■□□□□ 0.35
HOXC-AS3-204ENST00000567780 HNRNPUQ00839 825 aaKnown RBP eCLIP17.26■□□□□ 0.35
HOXC-AS3-204ENST00000567780 RPRD2Q5VT52 1461 aaKnown RBP17.25■□□□□ 0.35
HOXC-AS3-204ENST00000567780 ZNF326Q5BKZ1 582 aaKnown RBP17.25■□□□□ 0.35
HOXC-AS3-204ENST00000567780 NCOA1Q15788 1441 aa17.24■□□□□ 0.35
HOXC-AS3-204ENST00000567780 KIF14Q15058 1648 aa17.24■□□□□ 0.35
HOXC-AS3-204ENST00000567780 NUP160Q12769 1436 aa17.22■□□□□ 0.35
HOXC-AS3-204ENST00000567780 PKD2Q13563 968 aa17.21■□□□□ 0.35
HOXC-AS3-204ENST00000567780 ANKRD30AQ9BXX3 1397 aa17.2■□□□□ 0.34
HOXC-AS3-204ENST00000567780 TEX14Q8IWB6 1497 aa17.2■□□□□ 0.34
HOXC-AS3-204ENST00000567780 CCDC7Q96M83 1385 aa17.2■□□□□ 0.34
HOXC-AS3-204ENST00000567780 TSHZ2Q9NRE2 1034 aa17.2■□□□□ 0.34
HOXC-AS3-204ENST00000567780 PZPP20742 1482 aa17.19■□□□□ 0.34
HOXC-AS3-204ENST00000567780 CNGB1Q14028 1251 aaPredicted RBP17.19■□□□□ 0.34
HOXC-AS3-204ENST00000567780 POLR3GLQ9BT43 218 aa17.19■□□□□ 0.34
HOXC-AS3-204ENST00000567780 CNTLNQ9NXG0 1405 aa17.18■□□□□ 0.34
HOXC-AS3-204ENST00000567780 CCDC184Q52MB2 194 aa17.18■□□□□ 0.34
HOXC-AS3-204ENST00000567780 ITSN2Q9NZM3 1697 aa17.17■□□□□ 0.34
HOXC-AS3-204ENST00000567780 TSPY4P0CV99 314 aa17.16■□□□□ 0.34
HOXC-AS3-204ENST00000567780 TSPY10P0CW01 314 aa17.16■□□□□ 0.34
HOXC-AS3-204ENST00000567780 ANKRD50Q9ULJ7 1429 aa17.15■□□□□ 0.34
HOXC-AS3-204ENST00000567780 ATP10BO94823 1461 aa17.15■□□□□ 0.34
HOXC-AS3-204ENST00000567780 HNRNPMP52272 730 aaKnown RBP eCLIP17.15■□□□□ 0.34
HOXC-AS3-204ENST00000567780 FAM9BQ8IZU0 186 aa17.15■□□□□ 0.34
HOXC-AS3-204ENST00000567780 KIF7Q2M1P5 1343 aa17.15■□□□□ 0.34
HOXC-AS3-204ENST00000567780 KIAA1107Q9UPP5 1409 aa17.14■□□□□ 0.33
HOXC-AS3-204ENST00000567780 PRKRIP1Q9H875 184 aaPredicted RBP17.14■□□□□ 0.33
HOXC-AS3-204ENST00000567780 NUP155O75694 1391 aa17.14■□□□□ 0.33
HOXC-AS3-204ENST00000567780 MRS2Q9HD23 443 aa17.13■□□□□ 0.33
HOXC-AS3-204ENST00000567780 ADGRL2O95490 1459 aa17.12■□□□□ 0.33
HOXC-AS3-204ENST00000567780 ADCY10Q96PN6 1610 aa17.11■□□□□ 0.33
HOXC-AS3-204ENST00000567780 PTPRGP23470 1445 aa17.11■□□□□ 0.33
HOXC-AS3-204ENST00000567780 C9orf84Q5VXU9 1444 aa17.11■□□□□ 0.33
HOXC-AS3-204ENST00000567780 IRX6P78412 446 aaPredicted RBP17.11■□□□□ 0.33
HOXC-AS3-204ENST00000567780 ABCA8O94911 1581 aa17.1■□□□□ 0.33
HOXC-AS3-204ENST00000567780 ADGBQ8N7X0 1667 aa17.1■□□□□ 0.33
HOXC-AS3-204ENST00000567780 SPATA31E1Q6ZUB1 1445 aa17.09■□□□□ 0.33
HOXC-AS3-204ENST00000567780 KDM2AQ9Y2K7 1162 aa17.09■□□□□ 0.33
HOXC-AS3-204ENST00000567780 ABCC10Q5T3U5 1492 aa17.08■□□□□ 0.33
HOXC-AS3-204ENST00000567780 USP47Q96K76 1375 aa17.07■□□□□ 0.32
HOXC-AS3-204ENST00000567780 CROCC2H7BZ55 1655 aa17.06■□□□□ 0.32
HOXC-AS3-204ENST00000567780 CDC42BPAQ5VT25 1732 aa17.06■□□□□ 0.32
HOXC-AS3-204ENST00000567780 KIF15Q9NS87 1388 aa17.06■□□□□ 0.32
HOXC-AS3-204ENST00000567780 CARD11Q9BXL7 1154 aa17.03■□□□□ 0.32
HOXC-AS3-204ENST00000567780 DCAF11Q8TEB1 546 aa17.02■□□□□ 0.31
HOXC-AS3-204ENST00000567780 MBD5Q9P267 1494 aa17.01■□□□□ 0.31
HOXC-AS3-204ENST00000567780 SHANK2Q9UPX8 1470 aa17.01■□□□□ 0.31
HOXC-AS3-204ENST00000567780 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17■□□□□ 0.31
HOXC-AS3-204ENST00000567780 SENP3-EIF4A1A0A087X0R7 540 aa16.96■□□□□ 0.3
HOXC-AS3-204ENST00000567780 RGL3Q3MIN7 710 aa16.96■□□□□ 0.3
HOXC-AS3-204ENST00000567780 ST20-MTHFSA0A0A6YYL1 179 aa16.95■□□□□ 0.3
HOXC-AS3-204ENST00000567780 CCDC141Q6ZP82 1450 aa16.95■□□□□ 0.3
HOXC-AS3-204ENST00000567780 DHX29Q7Z478 1369 aaKnown RBP16.94■□□□□ 0.3
HOXC-AS3-204ENST00000567780 ZBED9Q6R2W3 1325 aa16.94■□□□□ 0.3
HOXC-AS3-204ENST00000567780 BCORL1Q5H9F3 1711 aa16.93■□□□□ 0.3
HOXC-AS3-204ENST00000567780 RSPH4AQ5TD94 716 aa16.93■□□□□ 0.3
HOXC-AS3-204ENST00000567780 SAMD9LQ8IVG5 1584 aa16.93■□□□□ 0.3
HOXC-AS3-204ENST00000567780 ARHGAP5Q13017 1502 aa16.92■□□□□ 0.3
HOXC-AS3-204ENST00000567780 UHRF1BP1Q6BDS2 1440 aa16.92■□□□□ 0.3
HOXC-AS3-204ENST00000567780 ARHGEF5Q12774 1597 aa16.91■□□□□ 0.3
HOXC-AS3-204ENST00000567780 RALGAPBQ86X10 1494 aa16.91■□□□□ 0.3
HOXC-AS3-204ENST00000567780 RBM19Q9Y4C8 960 aaKnown RBP16.91■□□□□ 0.3
HOXC-AS3-204ENST00000567780 KDM5CP41229 1560 aa16.91■□□□□ 0.3
HOXC-AS3-204ENST00000567780 ROCK2O75116 1388 aaKnown RBP16.9■□□□□ 0.3
HOXC-AS3-204ENST00000567780 SYCP2Q9BX26 1530 aa16.9■□□□□ 0.3
HOXC-AS3-204ENST00000567780 CHD1O14646 1710 aa16.89■□□□□ 0.29
HOXC-AS3-204ENST00000567780 POLR1AO95602 1720 aaPredicted RBP16.89■□□□□ 0.29
HOXC-AS3-204ENST00000567780 KDM5DQ9BY66 1539 aa16.89■□□□□ 0.29
HOXC-AS3-204ENST00000567780 CDC42BPBQ9Y5S2 1711 aa16.89■□□□□ 0.29
HOXC-AS3-204ENST00000567780 FAM135AQ9P2D6 1515 aa16.89■□□□□ 0.29
HOXC-AS3-204ENST00000567780 ARID4BQ4LE39 1312 aaPredicted RBP16.89■□□□□ 0.29
HOXC-AS3-204ENST00000567780 CCDC144AA2RUR9 1427 aa16.88■□□□□ 0.29
HOXC-AS3-204ENST00000567780 TMC1Q8TDI8 760 aa16.88■□□□□ 0.29
HOXC-AS3-204ENST00000567780 PREX2Q70Z35 1606 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms