RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 ABCC10Q5T3U5 1492 aa25.66■■□□□ 1.7
CMTM3-214ENST00000567572 TIMELESSQ9UNS1 1208 aa25.65■■□□□ 1.7
CMTM3-214ENST00000567572 DAPK1P53355 1430 aa25.62■■□□□ 1.69
CMTM3-214ENST00000567572 GTF3C3Q9Y5Q9 886 aa25.61■■□□□ 1.69
CMTM3-214ENST00000567572 CDC42BPAQ5VT25 1732 aa25.61■■□□□ 1.69
CMTM3-214ENST00000567572 CAMSAP2Q08AD1 1489 aa25.6■■□□□ 1.69
CMTM3-214ENST00000567572 ABCC5O15440 1437 aa25.58■■□□□ 1.69
CMTM3-214ENST00000567572 ZNF644Q9H582 1327 aaPredicted RBP25.58■■□□□ 1.68
CMTM3-214ENST00000567572 UHRF1BP1LA0JNW5 1464 aa25.57■■□□□ 1.68
CMTM3-214ENST00000567572 CFDP1Q9UEE9 299 aaPredicted RBP25.56■■□□□ 1.68
CMTM3-214ENST00000567572 ROCK1Q13464 1354 aa25.56■■□□□ 1.68
CMTM3-214ENST00000567572 CHIC2Q9UKJ5 165 aa25.53■■□□□ 1.68
CMTM3-214ENST00000567572 CROCC2H7BZ55 1655 aa25.51■■□□□ 1.67
CMTM3-214ENST00000567572 RRP7BPQ9NSQ0 103 aa25.51■■□□□ 1.67
CMTM3-214ENST00000567572 KDM6BO15054 1643 aa25.49■■□□□ 1.67
CMTM3-214ENST00000567572 ZCCHC11Q5TAX3 1644 aaKnown RBP25.49■■□□□ 1.67
CMTM3-214ENST00000567572 KDM5BQ9UGL1 1544 aa25.48■■□□□ 1.67
CMTM3-214ENST00000567572 PREX2Q70Z35 1606 aa25.47■■□□□ 1.67
CMTM3-214ENST00000567572 ADGBQ8N7X0 1667 aa25.47■■□□□ 1.67
CMTM3-214ENST00000567572 YTHDC1Q96MU7 727 aaKnown RBP25.45■■□□□ 1.67
CMTM3-214ENST00000567572 CDC42BPBQ9Y5S2 1711 aa25.43■■□□□ 1.66
CMTM3-214ENST00000567572 ADGRL2O95490 1459 aa25.43■■□□□ 1.66
CMTM3-214ENST00000567572 TTC37Q6PGP7 1564 aa25.43■■□□□ 1.66
CMTM3-214ENST00000567572 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.42■■□□□ 1.663e-7■■■■■ 59
CMTM3-214ENST00000567572 ZNF777Q9ULD5 760 aaPredicted RBP25.41■■□□□ 1.66
CMTM3-214ENST00000567572 SHANK2Q9UPX8 1470 aa25.4■■□□□ 1.66
CMTM3-214ENST00000567572 ARHGEF5Q12774 1597 aa25.38■■□□□ 1.65
CMTM3-214ENST00000567572 OSCARQ8IYS5 282 aa25.38■■□□□ 1.65
CMTM3-214ENST00000567572 SAMD9LQ8IVG5 1584 aa25.38■■□□□ 1.65
CMTM3-214ENST00000567572 NCOA1Q15788 1441 aa25.38■■□□□ 1.65
CMTM3-214ENST00000567572 SIN3AQ96ST3 1273 aa25.35■■□□□ 1.65
CMTM3-214ENST00000567572 MYO5CQ9NQX4 1742 aa25.35■■□□□ 1.65
CMTM3-214ENST00000567572 DENND4BO75064 1496 aaPredicted RBP25.35■■□□□ 1.65
CMTM3-214ENST00000567572 MBD5Q9P267 1494 aa25.33■■□□□ 1.65
CMTM3-214ENST00000567572 C9orf84Q5VXU9 1444 aa25.3■■□□□ 1.64
CMTM3-214ENST00000567572 ANKRD30AQ9BXX3 1397 aa25.3■■□□□ 1.64
CMTM3-214ENST00000567572 ARHGAP5Q13017 1502 aa25.3■■□□□ 1.64
CMTM3-214ENST00000567572 PPP1R15AO75807 674 aaPredicted RBP25.27■■□□□ 1.64
CMTM3-214ENST00000567572 CCDC141Q6ZP82 1450 aa25.27■■□□□ 1.64
CMTM3-214ENST00000567572 TRIM52Q96A61 297 aa25.27■■□□□ 1.64
CMTM3-214ENST00000567572 SYCP2Q9BX26 1530 aa25.24■■□□□ 1.63
CMTM3-214ENST00000567572 PLCH2O75038 1416 aa25.23■■□□□ 1.63
CMTM3-214ENST00000567572 WDR7Q9Y4E6 1490 aa25.23■■□□□ 1.63
CMTM3-214ENST00000567572 TONSLQ96HA7 1378 aa25.23■■□□□ 1.63
CMTM3-214ENST00000567572 KCNH8Q96L42 1107 aa25.23■■□□□ 1.63
CMTM3-214ENST00000567572 MPHOSPH9Q99550 1183 aa25.23■■□□□ 1.63
CMTM3-214ENST00000567572 PLEKHH2Q8IVE3 1493 aa25.23■■□□□ 1.63
CMTM3-214ENST00000567572 HNRNPMP52272 730 aaKnown RBP eCLIP25.22■■□□□ 1.63
CMTM3-214ENST00000567572 KIAA1107Q9UPP5 1409 aa25.22■■□□□ 1.63
CMTM3-214ENST00000567572 RSPH4AQ5TD94 716 aa25.21■■□□□ 1.63
CMTM3-214ENST00000567572 MAST1Q9Y2H9 1570 aa25.21■■□□□ 1.63
CMTM3-214ENST00000567572 ANKRD50Q9ULJ7 1429 aa25.2■■□□□ 1.62
CMTM3-214ENST00000567572 ARAP3Q8WWN8 1544 aa25.2■■□□□ 1.62
CMTM3-214ENST00000567572 TSPY4P0CV99 314 aa25.2■■□□□ 1.62
CMTM3-214ENST00000567572 TSPY10P0CW01 314 aa25.2■■□□□ 1.62
CMTM3-214ENST00000567572 PZPP20742 1482 aa25.17■■□□□ 1.62
CMTM3-214ENST00000567572 KIF15Q9NS87 1388 aa25.14■■□□□ 1.62
CMTM3-214ENST00000567572 ABCC1P33527 1531 aa25.14■■□□□ 1.62
CMTM3-214ENST00000567572 ABCA9Q8IUA7 1624 aa25.14■■□□□ 1.61
CMTM3-214ENST00000567572 ARHGEF12Q9NZN5 1544 aa25.13■■□□□ 1.61
CMTM3-214ENST00000567572 ASXL2Q76L83 1435 aa25.12■■□□□ 1.61
CMTM3-214ENST00000567572 PLXNC1O60486 1568 aa25.11■■□□□ 1.61
CMTM3-214ENST00000567572 ANKRD30BQ9BXX2 1392 aa25.11■■□□□ 1.61
CMTM3-214ENST00000567572 EFCAB2Q5VUJ9 269 aa25.1■■□□□ 1.61
CMTM3-214ENST00000567572 KDM5DQ9BY66 1539 aa25.1■■□□□ 1.61
CMTM3-214ENST00000567572 SLC4A1APQ9BWU0 796 aaKnown RBP25.09■■□□□ 1.61
CMTM3-214ENST00000567572 FOXD1Q16676 465 aa25.05■■□□□ 1.6
CMTM3-214ENST00000567572 RPRD2Q5VT52 1461 aaKnown RBP25.04■■□□□ 1.6
CMTM3-214ENST00000567572 CCER2I3L3R5 266 aa25.02■■□□□ 1.6
CMTM3-214ENST00000567572 DDX10Q13206 875 aaKnown RBP25.01■■□□□ 1.59
CMTM3-214ENST00000567572 TRAPPC8Q9Y2L5 1435 aa25■■□□□ 1.59
CMTM3-214ENST00000567572 FANCAO15360 1455 aa24.99■■□□□ 1.59
CMTM3-214ENST00000567572 NUP155O75694 1391 aa24.99■■□□□ 1.59
CMTM3-214ENST00000567572 UNC13BO14795 1591 aa24.98■■□□□ 1.59
CMTM3-214ENST00000567572 NPM1P06748 294 aaKnown RBP eCLIP24.98■■□□□ 1.59
CMTM3-214ENST00000567572 DUOX2Q9NRD8 1548 aa24.97■■□□□ 1.59
CMTM3-214ENST00000567572 TEX14Q8IWB6 1497 aa24.96■■□□□ 1.59
CMTM3-214ENST00000567572 PKD2Q13563 968 aa24.94■■□□□ 1.58
CMTM3-214ENST00000567572 RTEL1-TNFRSF6BF6WH68 1400 aa24.93■■□□□ 1.58
CMTM3-214ENST00000567572 ERBINQ96RT1 1412 aa24.93■■□□□ 1.58
CMTM3-214ENST00000567572 ZFYVE16Q7Z3T8 1539 aa24.93■■□□□ 1.58
CMTM3-214ENST00000567572 FAM135AQ9P2D6 1515 aa24.92■■□□□ 1.58
CMTM3-214ENST00000567572 ANP32CO43423 234 aa24.92■■□□□ 1.58
CMTM3-214ENST00000567572 MAGI2Q86UL8 1455 aa24.89■■□□□ 1.58
CMTM3-214ENST00000567572 INO80Q9ULG1 1556 aaPredicted RBP24.89■■□□□ 1.57
CMTM3-214ENST00000567572 ADGRL1O94910 1474 aa24.89■■□□□ 1.57
CMTM3-214ENST00000567572 L3MBTL2Q969R5 705 aa24.88■■□□□ 1.57
CMTM3-214ENST00000567572 IQGAP3Q86VI3 1631 aa24.87■■□□□ 1.57
CMTM3-214ENST00000567572 SPAG9O60271 1321 aaKnown RBP24.86■■□□□ 1.57
CMTM3-214ENST00000567572 RIMBP3CA6NJZ7 1639 aa24.86■■□□□ 1.57
CMTM3-214ENST00000567572 RIMBP3BA6NNM3 1639 aa24.86■■□□□ 1.57
CMTM3-214ENST00000567572 RIMBP3Q9UFD9 1639 aa24.86■■□□□ 1.57
CMTM3-214ENST00000567572 CFAP74Q9C0B2 1584 aa24.85■■□□□ 1.57
CMTM3-214ENST00000567572 AFAP1Q8N556 730 aa24.84■■□□□ 1.57
CMTM3-214ENST00000567572 SUPT16HQ9Y5B9 1047 aaKnown RBP24.84■■□□□ 1.57
CMTM3-214ENST00000567572 ATP7AQ04656 1500 aa24.84■■□□□ 1.57
CMTM3-214ENST00000567572 SCAPERQ9BY12 1400 aa24.84■■□□□ 1.57
CMTM3-214ENST00000567572 CD109Q6YHK3 1445 aa24.82■■□□□ 1.56
CMTM3-214ENST00000567572 HIRIP3Q9BW71 556 aaPredicted RBP24.76■■□□□ 1.55
CMTM3-214ENST00000567572 EIF4G2P78344 907 aaKnown RBP eCLIP24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms