RNA–Protein interactions for RNA: ENST00000566582.1

LINC01541-201, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 2

Gene LINC01541, Length 2,414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-201ENST00000566582 KIF14Q15058 1648 aa12.55□□□□□ -0.4
LINC01541-201ENST00000566582 ITSN2Q9NZM3 1697 aa12.55□□□□□ -0.4
LINC01541-201ENST00000566582 ATP10BO94823 1461 aa12.55□□□□□ -0.4
LINC01541-201ENST00000566582 ABCC5O15440 1437 aa12.55□□□□□ -0.4
LINC01541-201ENST00000566582 DNMT1P26358 1616 aaKnown RBP12.55□□□□□ -0.4
LINC01541-201ENST00000566582 PPP1R15AO75807 674 aaPredicted RBP12.54□□□□□ -0.4
LINC01541-201ENST00000566582 GPATCH8Q9UKJ3 1502 aaKnown RBP12.54□□□□□ -0.4
LINC01541-201ENST00000566582 CAMSAP2Q08AD1 1489 aa12.53□□□□□ -0.4
LINC01541-201ENST00000566582 ROCK1Q13464 1354 aa12.53□□□□□ -0.4
LINC01541-201ENST00000566582 KDM6BO15054 1643 aa12.53□□□□□ -0.4
LINC01541-201ENST00000566582 ADCY10Q96PN6 1610 aa12.53□□□□□ -0.4
LINC01541-201ENST00000566582 ACIN1Q9UKV3 1341 aaKnown RBP12.53□□□□□ -0.4
LINC01541-201ENST00000566582 MPHOSPH9Q99550 1183 aa12.51□□□□□ -0.41
LINC01541-201ENST00000566582 POTEDQ86YR6 584 aa12.49□□□□□ -0.41
LINC01541-201ENST00000566582 SCAF1Q9H7N4 1312 aaKnown RBP12.48□□□□□ -0.41
LINC01541-201ENST00000566582 FOXD1Q16676 465 aa12.48□□□□□ -0.41
LINC01541-201ENST00000566582 HIRIP3Q9BW71 556 aaPredicted RBP12.48□□□□□ -0.41
LINC01541-201ENST00000566582 SLC4A1APQ9BWU0 796 aaKnown RBP12.47□□□□□ -0.41
LINC01541-201ENST00000566582 SHROOM2Q13796 1616 aa12.47□□□□□ -0.41
LINC01541-201ENST00000566582 CDC42BPAQ5VT25 1732 aa12.46□□□□□ -0.41
LINC01541-201ENST00000566582 ABCC10Q5T3U5 1492 aa12.46□□□□□ -0.42
LINC01541-201ENST00000566582 ANKRD30AQ9BXX3 1397 aa12.46□□□□□ -0.42
LINC01541-201ENST00000566582 NCOA1Q15788 1441 aa12.45□□□□□ -0.42
LINC01541-201ENST00000566582 TSPY4P0CV99 314 aa12.45□□□□□ -0.42
LINC01541-201ENST00000566582 TSPY10P0CW01 314 aa12.45□□□□□ -0.42
LINC01541-201ENST00000566582 DENND4BO75064 1496 aaPredicted RBP12.45□□□□□ -0.42
LINC01541-201ENST00000566582 ERCC6L2Q5T890 1561 aa12.44□□□□□ -0.42
LINC01541-201ENST00000566582 DDX10Q13206 875 aaKnown RBP12.44□□□□□ -0.42
LINC01541-201ENST00000566582 ADGBQ8N7X0 1667 aa12.44□□□□□ -0.42
LINC01541-201ENST00000566582 HNRNPMP52272 730 aaKnown RBP eCLIP12.43□□□□□ -0.42
LINC01541-201ENST00000566582 CROCC2H7BZ55 1655 aa12.42□□□□□ -0.42
LINC01541-201ENST00000566582 ADGRL2O95490 1459 aa12.41□□□□□ -0.42
LINC01541-201ENST00000566582 KCNH8Q96L42 1107 aa12.41□□□□□ -0.42
LINC01541-201ENST00000566582 C9orf84Q5VXU9 1444 aa12.41□□□□□ -0.42
LINC01541-201ENST00000566582 ABCC2Q92887 1545 aa12.41□□□□□ -0.42
LINC01541-201ENST00000566582 ANKRD50Q9ULJ7 1429 aa12.4□□□□□ -0.43
LINC01541-201ENST00000566582 CLASP1Q7Z460 1538 aa12.39□□□□□ -0.43
LINC01541-201ENST00000566582 L3MBTL2Q969R5 705 aa12.39□□□□□ -0.43
LINC01541-201ENST00000566582 ANKRD30BQ9BXX2 1392 aa12.38□□□□□ -0.43
LINC01541-201ENST00000566582 GTF3C3Q9Y5Q9 886 aa12.38□□□□□ -0.43
LINC01541-201ENST00000566582 SHANK2Q9UPX8 1470 aa12.38□□□□□ -0.43
LINC01541-201ENST00000566582 ARHGAP5Q13017 1502 aa12.37□□□□□ -0.43
LINC01541-201ENST00000566582 PREX2Q70Z35 1606 aa12.37□□□□□ -0.43
LINC01541-201ENST00000566582 KDM5BQ9UGL1 1544 aa12.37□□□□□ -0.43
LINC01541-201ENST00000566582 CDC42BPBQ9Y5S2 1711 aa12.36□□□□□ -0.43
LINC01541-201ENST00000566582 PZPP20742 1482 aa12.36□□□□□ -0.43
LINC01541-201ENST00000566582 PKD2Q13563 968 aa12.36□□□□□ -0.43
LINC01541-201ENST00000566582 RSPH4AQ5TD94 716 aa12.36□□□□□ -0.43
LINC01541-201ENST00000566582 RPRD2Q5VT52 1461 aaKnown RBP12.35□□□□□ -0.43
LINC01541-201ENST00000566582 NUP155O75694 1391 aa12.35□□□□□ -0.43
LINC01541-201ENST00000566582 KIF15Q9NS87 1388 aa12.35□□□□□ -0.43
LINC01541-201ENST00000566582 CCDC141Q6ZP82 1450 aa12.35□□□□□ -0.43
LINC01541-201ENST00000566582 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.35□□□□□ -0.43
LINC01541-201ENST00000566582 TTC37Q6PGP7 1564 aa12.35□□□□□ -0.43
LINC01541-201ENST00000566582 SAMD9LQ8IVG5 1584 aa12.35□□□□□ -0.43
LINC01541-201ENST00000566582 ARHGEF5Q12774 1597 aa12.34□□□□□ -0.43
LINC01541-201ENST00000566582 MBD5Q9P267 1494 aa12.34□□□□□ -0.43
LINC01541-201ENST00000566582 KIAA1107Q9UPP5 1409 aa12.33□□□□□ -0.44
LINC01541-201ENST00000566582 EIF4G2P78344 907 aaKnown RBP eCLIP12.33□□□□□ -0.44
LINC01541-201ENST00000566582 ZCCHC11Q5TAX3 1644 aaKnown RBP12.32□□□□□ -0.44
LINC01541-201ENST00000566582 SYCP2Q9BX26 1530 aa12.32□□□□□ -0.44
LINC01541-201ENST00000566582 HSPA5P11021 654 aaKnown RBP12.32□□□□□ -0.44
LINC01541-201ENST00000566582 ANP32CO43423 234 aa12.31□□□□□ -0.44
LINC01541-201ENST00000566582 MYO5CQ9NQX4 1742 aa12.31□□□□□ -0.44
LINC01541-201ENST00000566582 UHRF1BP1LA0JNW5 1464 aa12.31□□□□□ -0.44
LINC01541-201ENST00000566582 TEX14Q8IWB6 1497 aa12.29□□□□□ -0.44
LINC01541-201ENST00000566582 ZNF326Q5BKZ1 582 aaKnown RBP12.29□□□□□ -0.44
LINC01541-201ENST00000566582 EFCAB2Q5VUJ9 269 aa12.29□□□□□ -0.44
LINC01541-201ENST00000566582 PLEKHH2Q8IVE3 1493 aa12.28□□□□□ -0.44
LINC01541-201ENST00000566582 NBPF8Q3BBV2 869 aa12.28□□□□□ -0.44
LINC01541-201ENST00000566582 PLCH2O75038 1416 aa12.27□□□□□ -0.45
LINC01541-201ENST00000566582 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.27□□□□□ -0.45
LINC01541-201ENST00000566582 KDM5DQ9BY66 1539 aa12.24□□□□□ -0.45
LINC01541-201ENST00000566582 OSCARQ8IYS5 282 aa12.24□□□□□ -0.45
LINC01541-201ENST00000566582 WASHC2AQ641Q2 1341 aa12.24□□□□□ -0.45
LINC01541-201ENST00000566582 MAST1Q9Y2H9 1570 aa12.23□□□□□ -0.45
LINC01541-201ENST00000566582 ARHGEF12Q9NZN5 1544 aa12.22□□□□□ -0.45
LINC01541-201ENST00000566582 FAM135AQ9P2D6 1515 aa12.22□□□□□ -0.45
LINC01541-201ENST00000566582 WDR7Q9Y4E6 1490 aa12.21□□□□□ -0.45
LINC01541-201ENST00000566582 CCER2I3L3R5 266 aa12.21□□□□□ -0.46
LINC01541-201ENST00000566582 KDM2AQ9Y2K7 1162 aa12.21□□□□□ -0.46
LINC01541-201ENST00000566582 MYT1LQ9UL68 1186 aa12.2□□□□□ -0.46
LINC01541-201ENST00000566582 PLXNC1O60486 1568 aa12.2□□□□□ -0.46
LINC01541-201ENST00000566582 NPM1P06748 294 aaKnown RBP eCLIP12.2□□□□□ -0.46
LINC01541-201ENST00000566582 ABCC1P33527 1531 aa12.19□□□□□ -0.46
LINC01541-201ENST00000566582 SPAG9O60271 1321 aaKnown RBP12.19□□□□□ -0.46
LINC01541-201ENST00000566582 DUOX2Q9NRD8 1548 aa12.19□□□□□ -0.46
LINC01541-201ENST00000566582 TRAPPC8Q9Y2L5 1435 aa12.19□□□□□ -0.46
LINC01541-201ENST00000566582 AFAP1Q8N556 730 aa12.19□□□□□ -0.46
LINC01541-201ENST00000566582 DCAF11Q8TEB1 546 aa12.19□□□□□ -0.46
LINC01541-201ENST00000566582 C11orf95C9JLR9 678 aaPredicted RBP12.18□□□□□ -0.46
LINC01541-201ENST00000566582 CCDC144AA2RUR9 1427 aa12.17□□□□□ -0.46
LINC01541-201ENST00000566582 CCDC7Q96M83 1385 aa12.17□□□□□ -0.46
LINC01541-201ENST00000566582 ERBINQ96RT1 1412 aa12.17□□□□□ -0.46
LINC01541-201ENST00000566582 UNC13BO14795 1591 aa12.16□□□□□ -0.46
LINC01541-201ENST00000566582 FANCAO15360 1455 aa12.16□□□□□ -0.46
LINC01541-201ENST00000566582 RGL3Q3MIN7 710 aa12.16□□□□□ -0.46
LINC01541-201ENST00000566582 POLR3GLQ9BT43 218 aa12.16□□□□□ -0.46
LINC01541-201ENST00000566582 ASXL2Q76L83 1435 aa12.16□□□□□ -0.46
LINC01541-201ENST00000566582 CARD11Q9BXL7 1154 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms