RNA–Protein interactions for RNA: ENST00000566426.1

PDXDC1-213, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 283 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-213ENST00000566426 EFCAB2Q5VUJ9 269 aa33.67■■■□□ 2.98
PDXDC1-213ENST00000566426 CDK11AQ9UQ88 783 aaPredicted RBP33.67■■■□□ 2.98
PDXDC1-213ENST00000566426 SIGLEC1Q9BZZ2 1709 aa33.67■■■□□ 2.98
PDXDC1-213ENST00000566426 ATP1B4Q9UN42 357 aaPredicted RBP33.66■■■□□ 2.98
PDXDC1-213ENST00000566426 ATP10AO60312 1499 aa33.65■■■□□ 2.98
PDXDC1-213ENST00000566426 FER1L4A9Z1Z3 1794 aa33.65■■■□□ 2.98
PDXDC1-213ENST00000566426 CERKQ8TCT0 537 aa33.64■■■□□ 2.98
PDXDC1-213ENST00000566426 FMN1Q68DA7 1419 aa33.62■■■□□ 2.97
PDXDC1-213ENST00000566426 C9orf84Q5VXU9 1444 aa33.61■■■□□ 2.97
PDXDC1-213ENST00000566426 UBTFP17480 764 aaKnown RBP33.58■■■□□ 2.97
PDXDC1-213ENST00000566426 ARHGEF12Q9NZN5 1544 aa33.58■■■□□ 2.97
PDXDC1-213ENST00000566426 MYO5CQ9NQX4 1742 aa33.55■■■□□ 2.96
PDXDC1-213ENST00000566426 ZNF518AQ6AHZ1 1483 aa33.52■■■□□ 2.96
PDXDC1-213ENST00000566426 DMRT2Q9Y5R5 561 aa33.5■■■□□ 2.95
PDXDC1-213ENST00000566426 CEBPAP49715 358 aaPredicted RBP33.49■■■□□ 2.95
PDXDC1-213ENST00000566426 MYT1LQ9UL68 1186 aa33.49■■■□□ 2.95
PDXDC1-213ENST00000566426 PREX1Q8TCU6 1659 aa33.48■■■□□ 2.95
PDXDC1-213ENST00000566426 EHMT2Q96KQ7 1210 aa33.48■■■□□ 2.95
PDXDC1-213ENST00000566426 KIF14Q15058 1648 aa33.46■■■□□ 2.95
PDXDC1-213ENST00000566426 AFAP1Q8N556 730 aa33.46■■■□□ 2.95
PDXDC1-213ENST00000566426 CLIP1P30622 1438 aa33.45■■■□□ 2.95
PDXDC1-213ENST00000566426 TROQ12816 1431 aaPredicted RBP33.45■■■□□ 2.95
PDXDC1-213ENST00000566426 ARHGAP35Q9NRY4 1499 aa33.45■■■□□ 2.95
PDXDC1-213ENST00000566426 ARHGAP5Q13017 1502 aa33.45■■■□□ 2.95
PDXDC1-213ENST00000566426 KDM5CP41229 1560 aa33.4■■■□□ 2.94
PDXDC1-213ENST00000566426 UHRF1BP1Q6BDS2 1440 aa33.4■■■□□ 2.94
PDXDC1-213ENST00000566426 SETD1BQ9UPS6 1966 aaKnown RBP33.39■■■□□ 2.94
PDXDC1-213ENST00000566426 ESF1Q9H501 851 aaKnown RBP33.34■■■□□ 2.93
PDXDC1-213ENST00000566426 REREQ9P2R6 1566 aa33.32■■■□□ 2.92
PDXDC1-213ENST00000566426 MLH3Q9UHC1 1453 aa33.31■■■□□ 2.92
PDXDC1-213ENST00000566426 DIP2CQ9Y2E4 1556 aa33.31■■■□□ 2.92
PDXDC1-213ENST00000566426 STRCQ7RTU9 1775 aa33.29■■■□□ 2.92
PDXDC1-213ENST00000566426 CDC42BPBQ9Y5S2 1711 aa33.25■■■□□ 2.91
PDXDC1-213ENST00000566426 AGLP35573 1532 aa33.24■■■□□ 2.91
PDXDC1-213ENST00000566426 ABCA6Q8N139 1617 aa33.23■■■□□ 2.91
PDXDC1-213ENST00000566426 PTPRTO14522 1441 aa33.22■■■□□ 2.91
PDXDC1-213ENST00000566426 TRAPPC8Q9Y2L5 1435 aa33.21■■■□□ 2.91
PDXDC1-213ENST00000566426 LRRIQ1Q96JM4 1722 aa33.2■■■□□ 2.91
PDXDC1-213ENST00000566426 C3P01024 1663 aa33.2■■■□□ 2.9
PDXDC1-213ENST00000566426 CCDC18Q5T9S5 1454 aa33.19■■■□□ 2.9
PDXDC1-213ENST00000566426 ABCC1P33527 1531 aa33.19■■■□□ 2.9
PDXDC1-213ENST00000566426 PREX2Q70Z35 1606 aa33.19■■■□□ 2.9
PDXDC1-213ENST00000566426 DISP3Q9P2K9 1392 aa33.18■■■□□ 2.9
PDXDC1-213ENST00000566426 CNTLNQ9NXG0 1405 aa33.17■■■□□ 2.9
PDXDC1-213ENST00000566426 CASKIN1Q8WXD9 1431 aa33.16■■■□□ 2.9
PDXDC1-213ENST00000566426 ITSN2Q9NZM3 1697 aa33.13■■■□□ 2.89
PDXDC1-213ENST00000566426 CHIC1Q5VXU3 224 aa33.1■■■□□ 2.89
PDXDC1-213ENST00000566426 KIDINS220Q9ULH0 1771 aa33.09■■■□□ 2.89
PDXDC1-213ENST00000566426 ZNF777Q9ULD5 760 aaPredicted RBP33.06■■■□□ 2.88
PDXDC1-213ENST00000566426 NCOA1Q15788 1441 aa33.04■■■□□ 2.88
PDXDC1-213ENST00000566426 CDC42BPAQ5VT25 1732 aa33.04■■■□□ 2.88
PDXDC1-213ENST00000566426 ILDR2Q71H61 639 aa33.03■■■□□ 2.88
PDXDC1-213ENST00000566426 NPATQ14207 1427 aa33.02■■■□□ 2.88
PDXDC1-213ENST00000566426 SPAG9O60271 1321 aaKnown RBP33.02■■■□□ 2.88
PDXDC1-213ENST00000566426 IQSEC2Q5JU85 1478 aa33.01■■■□□ 2.88
PDXDC1-213ENST00000566426 SAMD9LQ8IVG5 1584 aa33■■■□□ 2.87
PDXDC1-213ENST00000566426 LTBP4Q8N2S1 1624 aa33■■■□□ 2.87
PDXDC1-213ENST00000566426 SOCS7O14512 581 aa33■■■□□ 2.87
PDXDC1-213ENST00000566426 ZMYM3Q14202 1370 aa32.99■■■□□ 2.87
PDXDC1-213ENST00000566426 FYCO1Q9BQS8 1478 aa32.98■■■□□ 2.87
PDXDC1-213ENST00000566426 MROH2AA6NES4 1674 aa32.97■■■□□ 2.87
PDXDC1-213ENST00000566426 HNRNPMP52272 730 aaKnown RBP eCLIP32.96■■■□□ 2.87
PDXDC1-213ENST00000566426 CAMSAP1Q5T5Y3 1602 aa32.94■■■□□ 2.86
PDXDC1-213ENST00000566426 SYCP2Q9BX26 1530 aa32.93■■■□□ 2.86
PDXDC1-213ENST00000566426 GPATCH8Q9UKJ3 1502 aaKnown RBP32.93■■■□□ 2.86
PDXDC1-213ENST00000566426 CFDP1Q9UEE9 299 aaPredicted RBP32.9■■■□□ 2.86
PDXDC1-213ENST00000566426 KIAA1107Q9UPP5 1409 aa32.9■■■□□ 2.86
PDXDC1-213ENST00000566426 PLEKHH2Q8IVE3 1493 aa32.9■■■□□ 2.86
PDXDC1-213ENST00000566426 SUPT6HQ7KZ85 1726 aaKnown RBP32.88■■■□□ 2.85
PDXDC1-213ENST00000566426 SPATA31D1Q6ZQQ2 1576 aa32.88■■■□□ 2.85
PDXDC1-213ENST00000566426 NCKAP5LQ9HCH0 1330 aa32.87■■■□□ 2.85
PDXDC1-213ENST00000566426 ATP7AQ04656 1500 aa32.87■■■□□ 2.85
PDXDC1-213ENST00000566426 PKD2Q13563 968 aa32.86■■■□□ 2.85
PDXDC1-213ENST00000566426 A2MP01023 1474 aa32.85■■■□□ 2.85
PDXDC1-213ENST00000566426 CCNB3Q8WWL7 1395 aa32.84■■■□□ 2.85
PDXDC1-213ENST00000566426 GGT6Q6P531 493 aa32.83■■■□□ 2.85
PDXDC1-213ENST00000566426 PPP6R1Q9UPN7 881 aa32.83■■■□□ 2.85
PDXDC1-213ENST00000566426 CLTCQ00610 1675 aaKnown RBP32.81■■■□□ 2.84
PDXDC1-213ENST00000566426 PLA2R1Q13018 1463 aa32.8■■■□□ 2.84
PDXDC1-213ENST00000566426 PLXNC1O60486 1568 aa32.8■■■□□ 2.84
PDXDC1-213ENST00000566426 ZNF335Q9H4Z2 1342 aaPredicted RBP32.79■■■□□ 2.84
PDXDC1-213ENST00000566426 INO80Q9ULG1 1556 aaPredicted RBP32.79■■■□□ 2.84
PDXDC1-213ENST00000566426 PTPRKQ15262 1439 aa32.78■■■□□ 2.84
PDXDC1-213ENST00000566426 UBAP1LF5GYI3 381 aa32.78■■■□□ 2.84
PDXDC1-213ENST00000566426 MTUS2Q5JR59 1369 aa32.76■■■□□ 2.83
PDXDC1-213ENST00000566426 ZNF142P52746 1687 aaPredicted RBP32.75■■■□□ 2.83
PDXDC1-213ENST00000566426 MYO3AQ8NEV4 1616 aa32.75■■■□□ 2.83
PDXDC1-213ENST00000566426 CEP170BQ9Y4F5 1589 aaPredicted RBP32.75■■■□□ 2.83
PDXDC1-213ENST00000566426 TCOF1Q13428 1488 aaKnown RBP32.72■■■□□ 2.83
PDXDC1-213ENST00000566426 ADGBQ8N7X0 1667 aa32.69■■■□□ 2.82
PDXDC1-213ENST00000566426 ZNF644Q9H582 1327 aaPredicted RBP32.64■■■□□ 2.82
PDXDC1-213ENST00000566426 A2ML1A8K2U0 1454 aa32.63■■■□□ 2.81
PDXDC1-213ENST00000566426 RTEL1-TNFRSF6BF6WH68 1400 aa32.63■■■□□ 2.81
PDXDC1-213ENST00000566426 DHX29Q7Z478 1369 aaKnown RBP32.6■■■□□ 2.81
PDXDC1-213ENST00000566426 MBD5Q9P267 1494 aa32.6■■■□□ 2.81
PDXDC1-213ENST00000566426 TIAM1Q13009 1591 aa32.57■■■□□ 2.8
PDXDC1-213ENST00000566426 DNMT1P26358 1616 aaKnown RBP32.56■■■□□ 2.8
PDXDC1-213ENST00000566426 EHBP1L1Q8N3D4 1523 aa32.55■■■□□ 2.8
PDXDC1-213ENST00000566426 KIF3BO15066 747 aa32.54■■■□□ 2.8
PDXDC1-213ENST00000566426 TNRQ92752 1358 aa32.53■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms