RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 GPATCH3Q96I76 525 aa6.36□□□□□ -1.39
SMG1-211ENST00000565324 RRP12Q5JTH9 1297 aaKnown RBP6.36□□□□□ -1.39
SMG1-211ENST00000565324 CCER2I3L3R5 266 aa6.36□□□□□ -1.39
SMG1-211ENST00000565324 RWDD1Q9H446 243 aaPredicted RBP6.36□□□□□ -1.39
SMG1-211ENST00000565324 PMFBP1Q8TBY8 1022 aa6.36□□□□□ -1.39
SMG1-211ENST00000565324 NPHP1O15259 732 aa6.36□□□□□ -1.39
SMG1-211ENST00000565324 MAP7D2Q96T17 732 aa6.36□□□□□ -1.39
SMG1-211ENST00000565324 IPO9Q96P70 1041 aaKnown RBP6.35□□□□□ -1.39
SMG1-211ENST00000565324 CARD11Q9BXL7 1154 aa6.35□□□□□ -1.39
SMG1-211ENST00000565324 CWC15Q9P013 229 aaKnown RBP6.35□□□□□ -1.39
SMG1-211ENST00000565324 KIF16BQ96L93 1317 aa6.35□□□□□ -1.39
SMG1-211ENST00000565324 SCRIBQ14160 1630 aa6.35□□□□□ -1.39
SMG1-211ENST00000565324 ARID3AQ99856 593 aa6.35□□□□□ -1.39
SMG1-211ENST00000565324 PHLDB1Q86UU1 1377 aa6.35□□□□□ -1.39
SMG1-211ENST00000565324 CHIC2Q9UKJ5 165 aa6.34□□□□□ -1.39
SMG1-211ENST00000565324 VSIG10Q8N0Z9 540 aa6.34□□□□□ -1.39
SMG1-211ENST00000565324 CDR1P51861 262 aa6.34□□□□□ -1.39
SMG1-211ENST00000565324 B4GALNT3Q6L9W6 998 aa6.34□□□□□ -1.39
SMG1-211ENST00000565324 ACBD3Q9H3P7 528 aa6.34□□□□□ -1.39
SMG1-211ENST00000565324 TPM2P07951 284 aa6.34□□□□□ -1.39
SMG1-211ENST00000565324 ST18O60284 1047 aa6.33□□□□□ -1.4
SMG1-211ENST00000565324 APPP05067 770 aa6.33□□□□□ -1.4
SMG1-211ENST00000565324 TIMELESSQ9UNS1 1208 aa6.33□□□□□ -1.4
SMG1-211ENST00000565324 ZCCHC6Q5VYS8 1495 aaKnown RBP6.33□□□□□ -1.4
SMG1-211ENST00000565324 GOLGA6L19H0YKK7 550 aa6.33□□□□□ -1.4
SMG1-211ENST00000565324 KTN1Q86UP2 1357 aaKnown RBP6.33□□□□□ -1.4
SMG1-211ENST00000565324 IPO7O95373 1038 aaKnown RBP6.33□□□□□ -1.4
SMG1-211ENST00000565324 TAOK2Q9UL54 1235 aa6.32□□□□□ -1.4
SMG1-211ENST00000565324 ZBTB7CA1YPR0 619 aa6.32□□□□□ -1.4
SMG1-211ENST00000565324 CCDC66A2RUB6 948 aa6.32□□□□□ -1.4
SMG1-211ENST00000565324 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.32□□□□□ -1.4
SMG1-211ENST00000565324 NEUROD2Q15784 382 aa6.32□□□□□ -1.4
SMG1-211ENST00000565324 DCTN1Q14203 1278 aa6.32□□□□□ -1.4
SMG1-211ENST00000565324 PRM3Q9NNZ6 103 aa6.32□□□□□ -1.4
SMG1-211ENST00000565324 CEP162Q5TB80 1403 aa6.31□□□□□ -1.4
SMG1-211ENST00000565324 CCDC191Q8NCU4 936 aa6.31□□□□□ -1.4
SMG1-211ENST00000565324 ABCC9O60706 1549 aa6.31□□□□□ -1.4
SMG1-211ENST00000565324 NCBP3Q53F19 620 aaKnown RBP6.31□□□□□ -1.4
SMG1-211ENST00000565324 AK7Q96M32 723 aa6.31□□□□□ -1.4
SMG1-211ENST00000565324 ARGLU1Q9NWB6 273 aaPredicted RBP6.31□□□□□ -1.4
SMG1-211ENST00000565324 HSP90B2PQ58FF3 399 aa6.3□□□□□ -1.4
SMG1-211ENST00000565324 ANKRD20A12PQ8NF67 263 aa6.3□□□□□ -1.4
SMG1-211ENST00000565324 TMF1P82094 1093 aa6.3□□□□□ -1.4
SMG1-211ENST00000565324 TPD52L1Q16890 204 aaPredicted RBP6.3□□□□□ -1.4
SMG1-211ENST00000565324 HOOK1Q9UJC3 728 aaKnown RBP6.3□□□□□ -1.4
SMG1-211ENST00000565324 GSE1Q14687 1217 aa6.3□□□□□ -1.4
SMG1-211ENST00000565324 SLKQ9H2G2 1235 aaPredicted RBP6.3□□□□□ -1.4
SMG1-211ENST00000565324 HSP90B1P14625 803 aaKnown RBP6.3□□□□□ -1.4
SMG1-211ENST00000565324 CEP164Q9UPV0 1460 aa6.3□□□□□ -1.4
SMG1-211ENST00000565324 SPRYD3Q8NCJ5 442 aa6.29□□□□□ -1.4
SMG1-211ENST00000565324 RUFY1Q96T51 708 aa6.29□□□□□ -1.4
SMG1-211ENST00000565324 RASSF8Q8NHQ8 419 aa6.29□□□□□ -1.4
SMG1-211ENST00000565324 U2SURPO15042 1029 aaKnown RBP6.29□□□□□ -1.4
SMG1-211ENST00000565324 HIRIP3Q9BW71 556 aaPredicted RBP6.29□□□□□ -1.4
SMG1-211ENST00000565324 POGKQ9P215 609 aa6.29□□□□□ -1.4
SMG1-211ENST00000565324 FHAD1B1AJZ9 1412 aa6.29□□□□□ -1.4
SMG1-211ENST00000565324 RDXP35241 583 aaKnown RBP6.29□□□□□ -1.4
SMG1-211ENST00000565324 KANK1Q14678 1352 aa6.29□□□□□ -1.4
SMG1-211ENST00000565324 RTF1Q92541 710 aaKnown RBP6.29□□□□□ -1.4
SMG1-211ENST00000565324 DIAPH3Q9NSV4 1193 aa6.29□□□□□ -1.4
SMG1-211ENST00000565324 RCAN3Q9UKA8 241 aa6.29□□□□□ -1.4
SMG1-211ENST00000565324 MYO6Q9UM54 1294 aa6.29□□□□□ -1.4
SMG1-211ENST00000565324 ISY1Q9ULR0 285 aaKnown RBP6.28□□□□□ -1.4
SMG1-211ENST00000565324 BECN2A8MW95 431 aa6.28□□□□□ -1.4
SMG1-211ENST00000565324 LRRFIP1Q32MZ4 808 aaKnown RBP6.28□□□□□ -1.4
SMG1-211ENST00000565324 EIF3AQ14152 1382 aaKnown RBP6.28□□□□□ -1.4
SMG1-211ENST00000565324 RRP7BPQ9NSQ0 103 aa6.28□□□□□ -1.4
SMG1-211ENST00000565324 SPAG9O60271 1321 aaKnown RBP6.28□□□□□ -1.4
SMG1-211ENST00000565324 CCAR2Q8N163 923 aaKnown RBP6.28□□□□□ -1.4
SMG1-211ENST00000565324 SF3A1Q15459 793 aaKnown RBP6.27□□□□□ -1.41
SMG1-211ENST00000565324 TAF3Q5VWG9 929 aa6.27□□□□□ -1.41
SMG1-211ENST00000565324 CAGE1Q8TC20 777 aa6.27□□□□□ -1.41
SMG1-211ENST00000565324 DDX49Q9Y6V7 483 aaKnown RBP6.27□□□□□ -1.41
SMG1-211ENST00000565324 CCDC173Q0VFZ6 552 aa6.27□□□□□ -1.41
SMG1-211ENST00000565324 RALBP1Q15311 655 aa6.27□□□□□ -1.41
SMG1-211ENST00000565324 PES1O00541 588 aaKnown RBP6.27□□□□□ -1.41
SMG1-211ENST00000565324 PDE3BQ13370 1112 aa6.26□□□□□ -1.41
SMG1-211ENST00000565324 CC2D1BQ5T0F9 858 aaKnown RBP6.26□□□□□ -1.41
SMG1-211ENST00000565324 HDGFP51858 240 aaKnown RBP6.26□□□□□ -1.41
SMG1-211ENST00000565324 GORABQ5T7V8 394 aa6.26□□□□□ -1.41
SMG1-211ENST00000565324 ROCK2O75116 1388 aaKnown RBP6.26□□□□□ -1.41
SMG1-211ENST00000565324 H0YHG0 523 aa6.26□□□□□ -1.41
SMG1-211ENST00000565324 RGL3Q3MIN7 710 aa6.26□□□□□ -1.41
SMG1-211ENST00000565324 DHX8Q14562 1220 aaKnown RBP6.26□□□□□ -1.41
SMG1-211ENST00000565324 ZRSR2Q15696 482 aaKnown RBP6.26□□□□□ -1.41
SMG1-211ENST00000565324 MORC1Q86VD1 984 aa6.25□□□□□ -1.41
SMG1-211ENST00000565324 ITPRIPQ8IWB1 547 aa6.25□□□□□ -1.41
SMG1-211ENST00000565324 PLEKHD1A6NEE1 506 aa6.25□□□□□ -1.41
SMG1-211ENST00000565324 H3BQV1 296 aa6.25□□□□□ -1.41
SMG1-211ENST00000565324 IFFO2Q5TF58 517 aa6.25□□□□□ -1.41
SMG1-211ENST00000565324 CFDP1Q9UEE9 299 aaPredicted RBP6.25□□□□□ -1.41
SMG1-211ENST00000565324 USP8P40818 1118 aa6.25□□□□□ -1.41
SMG1-211ENST00000565324 ERCC4Q92889 916 aaPredicted RBP6.25□□□□□ -1.41
SMG1-211ENST00000565324 MFAP1P55081 439 aaKnown RBP6.25□□□□□ -1.41
SMG1-211ENST00000565324 PABPN1Q86U42 306 aaKnown RBP eCLIP6.25□□□□□ -1.417e-7■□□□□ 10.4
SMG1-211ENST00000565324 HOMER1Q86YM7 354 aa6.25□□□□□ -1.41
SMG1-211ENST00000565324 CENPQQ7L2Z9 268 aaPredicted RBP6.25□□□□□ -1.41
SMG1-211ENST00000565324 TRIM6-TRIM34B2RNG4 842 aa6.25□□□□□ -1.41
SMG1-211ENST00000565324 FAM161AQ3B820 660 aa6.24□□□□□ -1.41
SMG1-211ENST00000565324 CCDC47Q96A33 483 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms